{ "type": "genome", "identifier": "GCF_003051105.1", "organism": "Nitrosomonas nitrosa", "title": "Nitrosomonas nitrosa", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003051105.1", "bioproject": "PRJNA224116", "biosample": "SAMN08778375", "wgs_master": "QAOO00000000.1", "refseq_category": "reference genome", "taxid": "52442", "species_taxid": "52442", "organism_name": "Nitrosomonas nitrosa", "infraspecific_name": "strain=Nm90", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/04/13", "asm_name": "ASM305110v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003051105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/051/105/GCF_003051105.1_ASM305110v1", "excluded_from_refseq": "na", 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Hamburg" ], "sample_host_location_id": [], "data_size": "0.980 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3420013", "Number of Sequences": "85", "Longest Sequences (bp)": "217833", "N50 (bp)": "125868", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "47.2", "Number of CDSs": "2964", "Average Protein Length": "324.9", "Coding Ratio (%)": "84.5", "Number of rRNAs": "3", "Number of tRNAs": "42", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Nitrosomonas nitrosa", "strain": "strain=Nm90", "accession": "GCA_003051105.1", "taxid": 52442, "species_taxid": 52442, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1090, "total_fragments": 1093, "ani_threshold": 95, 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