{ "type": "genome", "identifier": "GCF_003054045.1", "organism": "Sphingobacterium faecium", "title": "Sphingobacterium faecium", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003054045.1", "bioproject": "PRJNA224116", "biosample": "SAMN08778571", "wgs_master": "QBKH00000000.1", "refseq_category": "reference genome", "taxid": "34087", "species_taxid": "34087", "organism_name": "Sphingobacterium faecium", "infraspecific_name": "strain=DSM 11690", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/04/17", "asm_name": "ASM305404v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003054045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/054/045/GCF_003054045.1_ASM305404v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5296794", "genome_size_ungapped": "5296758", "gc_percent": "36.500000", "replicon_count": "0", "scaffold_count": "22", "contig_count": "22", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003054045.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "4509", "protein_coding_gene_count": "4410", "non_coding_gene_count": "84", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-04-17", "dateModified": "2018-04-17", "datePublished": "2018-04-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobacterium faecium" ], "sample_taxid": [ "34087" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"status": "below_threshold" }, { "organism_name": "Sphingobacterium paramultivorum", "strain": "strain=w15", "accession": "GCA_009660355.1", "taxid": 2886510, "species_taxid": 2886510, "relation_to_type": "type", "validated": true, "ani": 78.2106, "matched_fragments": 248, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium lumbrici", "strain": "strain=1.3611", "accession": "GCA_006476045.1", "taxid": 2559600, "species_taxid": 2559600, "relation_to_type": "type", "validated": true, "ani": 78.2001, "matched_fragments": 131, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium puteale", "strain": "strain=M05W1-28", "accession": "GCA_003627955.1", "taxid": 2420510, "species_taxid": 2420510, "relation_to_type": "type", "validated": true, "ani": 78.0813, "matched_fragments": 237, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium olei", "strain": "strain=HAL-9", "accession": "GCA_005048855.1", "taxid": 2571155, "species_taxid": 2571155, "relation_to_type": "type", "validated": true, "ani": 78.0012, "matched_fragments": 142, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium composti Ten et al. 2007 non Yoo et al. 2007", "strain": "strain=KCTC 12578", "accession": "GCA_009829075.1", "taxid": 363260, "species_taxid": 363260, "relation_to_type": "type", "validated": true, "ani": 78.0011, "matched_fragments": 163, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium litopenaei", "strain": "strain=DN04309", "accession": "GCA_014692495.1", "taxid": 2763500, "species_taxid": 2763500, "relation_to_type": "type", "validated": true, "ani": 77.9906, "matched_fragments": 169, "total_fragments": 1754, "ani_threshold": 95, "status": "below_threshold" }, { 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