{ "type": "genome", "identifier": "GCF_003056355.1", "organism": "Devosia naphthalenivorans", "title": "Devosia naphthalenivorans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang Wanli University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003056355.1", "bioproject": "PRJNA224116", "biosample": "SAMN08781006", "wgs_master": "PYVW00000000.1", "refseq_category": "reference genome", "taxid": "2082392", "species_taxid": "2082392", "organism_name": "Devosia naphthalenivorans", "infraspecific_name": "strain=CM5-1", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/04/18", "asm_name": "ASM305635v1", "asm_submitter": "Zhejiang Wanli University", "gbrs_paired_asm": "GCA_003056355.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/056/355/GCF_003056355.1_ASM305635v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4488200", "genome_size_ungapped": "4487701", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "55", "contig_count": "55", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003056355.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "4386", "protein_coding_gene_count": "4245", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-04-18", "dateModified": "2018-04-18", "datePublished": "2018-04-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Devosia naphthalenivorans" ], "sample_taxid": [ "2082392" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Devosia oryziradicis", "strain": "strain=G19", "accession": "GCA_016698645.1", "taxid": 2801335, "species_taxid": 2801335, "relation_to_type": "type", "validated": true, "ani": 80.8169, "matched_fragments": 674, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia limi", "strain": "strain=DSM 17137", "accession": "GCA_900128975.1", "taxid": 288995, "species_taxid": 288995, "relation_to_type": "type", "validated": true, "ani": 80.8083, "matched_fragments": 682, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia limi", "strain": "strain=DSM 17137", "accession": "GCA_000970435.1", "taxid": 288995, "species_taxid": 288995, "relation_to_type": "type", "validated": true, "ani": 80.7497, "matched_fragments": 673, "total_fragments": 1472, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia psychrophila", "strain": 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