{ "type": "genome", "identifier": "GCF_003058085.1", "organism": "Yoonia sediminilitoris", "title": "Yoonia sediminilitoris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003058085.1", "bioproject": "PRJNA224116", "biosample": "SAMN08779099", "wgs_master": "QBUD00000000.1", "refseq_category": "reference genome", "taxid": "1286148", "species_taxid": "1286148", "organism_name": "Yoonia sediminilitoris", "infraspecific_name": "strain=DSM 29955", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/04/20", "asm_name": "ASM305808v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003058085.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/058/085/GCF_003058085.1_ASM305808v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4668162", "genome_size_ungapped": "4667383", "gc_percent": "57.000000", "replicon_count": "0", "scaffold_count": "49", "contig_count": "49", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003058085.1-RS_2024_09_23", "annotation_date": "2024-09-23", "total_gene_count": "4555", "protein_coding_gene_count": "4395", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-04-20", "dateModified": "2018-04-20", "datePublished": "2018-04-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Yoonia sediminilitoris" ], "sample_taxid": [ "1286148" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1470562, "species_taxid": 1470562, "relation_to_type": "type", "validated": true, "ani": 76.776, "matched_fragments": 208, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lutimaribacter saemankumensis", "strain": "strain=DSM 28010", "accession": "GCA_900100005.1", "taxid": 490829, "species_taxid": 490829, "relation_to_type": "type", "validated": true, "ani": 76.6903, "matched_fragments": 173, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ascidiaceihabitans donghaensis", "strain": "strain=CECT 8599", "accession": "GCA_900302465.1", "taxid": 1510460, "species_taxid": 1510460, "relation_to_type": "type", "validated": true, "ani": 76.6849, "matched_fragments": 136, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola endophyticus", "strain": "strain=CBS1P-1", "accession": "GCA_018760365.1", "taxid": 2841273, "species_taxid": 2841273, "relation_to_type": "type", "validated": true, "ani": 76.5839, "matched_fragments": 122, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter caeruleus", "strain": "strain=N8", "accession": "GCA_008271655.1", "taxid": 2595004, "species_taxid": 2595004, "relation_to_type": "type", "validated": true, "ani": 76.5415, "matched_fragments": 158, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Antarcticimicrobium sediminis", "strain": "strain=S4J41", "accession": "GCA_004348975.1", "taxid": 2546227, "species_taxid": 2546227, "relation_to_type": "type", "validated": true, "ani": 76.5277, "matched_fragments": 185, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodophyticola porphyridii", "strain": "strain=MA-7-27", "accession": "GCA_003688285.1", "taxid": 1852017, "species_taxid": 1852017, "relation_to_type": "type", "validated": true, "ani": 76.4496, "matched_fragments": 140, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tabrizicola sediminis", "strain": "strain=DRYC-M-16", "accession": "GCA_004745575.1", "taxid": 2486418, "species_taxid": 2486418, "relation_to_type": "type", "validated": true, "ani": 76.2851, "matched_fragments": 154, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mameliella sediminis", "strain": "strain=DP3N28-2", "accession": "GCA_019218285.1", "taxid": 2836866, "species_taxid": 2836866, "relation_to_type": "type", "validated": true, "ani": 76.2274, "matched_fragments": 192, "total_fragments": 1530, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marivivens niveibacter", "strain": "strain=MCCC 1A06712", "accession": "GCA_002150005.2", "taxid": 1930667, "species_taxid": 1930667, "relation_to_type": "type", "validated": true, "ani": 76.2029, "matched_fragments": 126, 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