{ "tc_result": [ { "organism_name": "Streptococcus chenjunshii", "strain": "strain=Z15", "accession": "GCA_003086355.2", "taxid": 2173853, "species_taxid": 2173853, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 811, "total_fragments": 814, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptococcus pantholopis", "strain": "strain=TA 26", "accession": "GCA_001642085.1", "taxid": 1811193, "species_taxid": 1811193, "relation_to_type": "type", "validated": true, "ani": 82.3376, "matched_fragments": 515, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus pseudoporcinus", "strain": "strain=NCTC13786", "accession": "GCA_900637075.1", "taxid": 361101, "species_taxid": 361101, "relation_to_type": "type", "validated": true, "ani": 79.3373, "matched_fragments": 63, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus pseudoporcinus", "strain": "strain=LQ 940-04", "accession": "GCA_000188035.3", "taxid": 361101, "species_taxid": 361101, "relation_to_type": "type", "validated": true, "ani": 78.9621, "matched_fragments": 62, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus agalactiae", "strain": "strain=NCTC8181", "accession": "GCA_900458965.1", "taxid": 1311, "species_taxid": 1311, "relation_to_type": "suspected-type", "validated": true, "ani": 78.7829, "matched_fragments": 71, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus lutetiensis", "strain": "strain=FDAARGOS_1018", "accession": "GCA_016403165.1", "taxid": 150055, "species_taxid": 150055, "relation_to_type": "type", "validated": true, "ani": 78.7052, "matched_fragments": 80, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus sobrinus", "strain": "strain=SL1", "accession": "GCA_003172995.1", "taxid": 1310, "species_taxid": 1310, "relation_to_type": "type", "validated": true, "ani": 78.6629, "matched_fragments": 69, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus ferus", "strain": "strain=NCTC12278", "accession": "GCA_900475025.1", "taxid": 1345, "species_taxid": 1345, "relation_to_type": "type", "validated": true, "ani": 78.1911, "matched_fragments": 91, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus henryi", "strain": "strain=DSM 19005", "accession": "GCA_000376985.1", "taxid": 439219, "species_taxid": 439219, "relation_to_type": "type", "validated": true, "ani": 77.3146, "matched_fragments": 74, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus ferus", "strain": "strain=DSM 20646", "accession": "GCA_000372425.1", "taxid": 1345, "species_taxid": 1345, "relation_to_type": "type", "validated": true, "ani": 77.2726, "matched_fragments": 85, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus ratti", "strain": "strain=FA-1", "accession": "GCA_000286075.1", "taxid": 1341, "species_taxid": 1341, "relation_to_type": "suspected-type", "validated": true, "ani": 77.2531, "matched_fragments": 122, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus caballi", "strain": "strain=DSM 19004", "accession": "GCA_000379985.1", "taxid": 439220, "species_taxid": 439220, "relation_to_type": "type", "validated": true, "ani": 77.2509, "matched_fragments": 94, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus agalactiae", "strain": "strain=ATCC 13813", "accession": "GCA_000186445.1", "taxid": 1311, "species_taxid": 1311, "relation_to_type": "type", "validated": true, "ani": 77.2061, "matched_fragments": 63, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus ratti", "strain": "strain=DSM 20564", "accession": "GCA_000347915.1", "taxid": 1341, "species_taxid": 1341, "relation_to_type": "suspected-type", "validated": true, "ani": 77.1183, "matched_fragments": 113, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus equi subsp. ruminatorum", "strain": "strain=CECT 5772", "accession": "GCA_000706805.1", "taxid": 254358, "species_taxid": 1336, "relation_to_type": "type", "validated": true, "ani": 77.0472, "matched_fragments": 65, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptococcus sobrinus", "strain": "strain=DSM 20742", "accession": "GCA_000686605.1", "taxid": 1310, "species_taxid": 1310, "relation_to_type": "type", "validated": true, "ani": 76.9757, "matched_fragments": 64, "total_fragments": 814, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003086355.1", "gtdb_species": "s__Streptococcus chenjunshii", "ani": 100.0, "matched_fragments": 812, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_001642085.1", "gtdb_species": "s__Streptococcus pantholopis", "ani": 82.349, "matched_fragments": 511, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000188035.1", "gtdb_species": "s__Streptococcus pseudoporcinus", "ani": 79.0743, "matched_fragments": 62, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.36", "min_intra_species_ani": "97.79", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.85", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_001431045.1", "gtdb_species": "s__Streptococcus orisasini", "ani": 78.2606, "matched_fragments": 133, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013343115.1", "gtdb_species": "s__Streptococcus sanguinis_H", "ani": 78.1491, "matched_fragments": 66, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.75", "min_intra_species_ani": "95.06", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 13, "status": "-" }, { "accession": "GCF_002355215.1", "gtdb_species": "s__Streptococcus troglodytae", "ani": 78.0024, "matched_fragments": 99, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006739205.1", "gtdb_species": "s__Streptococcus mutans", "ani": 77.9026, "matched_fragments": 109, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "98.73", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.87", "num_clustered_genomes": 261, "status": "-" }, { "accession": "GCF_012277075.1", "gtdb_species": "s__Streptococcus alactolyticus", "ani": 77.8814, "matched_fragments": 63, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.29", "min_intra_species_ani": "98.88", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.83", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_000380105.1", "gtdb_species": "s__Streptococcus orisratti", "ani": 77.8597, "matched_fragments": 117, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000423745.1", "gtdb_species": "s__Streptococcus plurextorum", "ani": 77.4549, "matched_fragments": 53, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000376985.1", "gtdb_species": "s__Streptococcus henryi", "ani": 77.3146, "matched_fragments": 74, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.14", "min_intra_species_ani": "98.14", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000286075.1", "gtdb_species": "s__Streptococcus ratti", "ani": 77.2742, "matched_fragments": 121, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.59", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.87", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000372425.1", "gtdb_species": "s__Streptococcus ferus", "ani": 77.2726, "matched_fragments": 85, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001937065.1", "gtdb_species": "s__Streptococcus sp001937065", "ani": 77.2613, "matched_fragments": 113, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000186445.1", "gtdb_species": "s__Streptococcus agalactiae", "ani": 77.2061, "matched_fragments": 63, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.18", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.63", "num_clustered_genomes": 1516, "status": "-" }, { "accession": "GCF_011038795.1", "gtdb_species": "s__Streptococcus sp011038795", "ani": 77.174, "matched_fragments": 76, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.03", "min_intra_species_ani": "99.03", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000379985.1", "gtdb_species": "s__Streptococcus caballi", "ani": 77.1698, "matched_fragments": 94, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000686605.1", "gtdb_species": "s__Streptococcus sobrinus", "ani": 76.9768, "matched_fragments": 64, "total_fragments": 814, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.93", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.92", "num_clustered_genomes": 52, "status": "-" } ] }