{
    "type": "genome",
    "identifier": "GCF_003119195.2",
    "organism": "Azospirillum baldaniorum",
    "title": "Azospirillum baldaniorum",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Minnesota",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003119195.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN07274326",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1064539",
        "species_taxid": "1064539",
        "organism_name": "Azospirillum baldaniorum",
        "infraspecific_name": "strain=Sp245",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Chromosome",
        "release_type": "Minor",
        "genome_rep": "Full",
        "seq_rel_date": "2018/05/11",
        "asm_name": "ASM311919v2",
        "asm_submitter": "University of Minnesota",
        "gbrs_paired_asm": "GCA_003119195.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/119/195/GCF_003119195.2_ASM311919v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "7682393",
        "genome_size_ungapped": "7682293",
        "gc_percent": "68.500000",
        "replicon_count": "7",
        "scaffold_count": "7",
        "contig_count": "7",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003119195.2-RS_2024_05_04",
        "annotation_date": "2024-05-04",
        "total_gene_count": "6994",
        "protein_coding_gene_count": "6787",
        "non_coding_gene_count": "123",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-05-11",
    "dateModified": "2018-05-11",
    "datePublished": "2018-05-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Azospirillum baldaniorum"
        ],
        "sample_taxid": [
            "1064539"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Rio De Janeiro"
        ],
        "sample_host_location_id": [],
        "data_size": "2.078 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "7682293",
        "Number of Sequences": "7",
        "Longest Sequences (bp)": "3049801",
        "N50 (bp)": "1776336",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.4",
        "Number of CDSs": "6983",
        "Average Protein Length": "325.5",
        "Coding Ratio (%)": "88.8",
        "Number of rRNAs": "29",
        "Number of tRNAs": "104",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Azospirillum baldaniorum",
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                "accession": "GCA_003119195.2",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 2553,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Azospirillum baldaniorum",
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                "relation_to_type": "type",
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                "matched_fragments": 2497,
                "total_fragments": 2558,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Azospirillum argentinense",
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                "accession": "GCA_000632475.2",
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                "species_taxid": 2970906,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Azospirillum brasilense",
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                "accession": "GCA_007827425.1",
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                "species_taxid": 192,
                "relation_to_type": "type",
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                "ani": 94.9455,
                "matched_fragments": 2062,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum brasilense",
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                "accession": "GCA_008274945.1",
                "taxid": 192,
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                "ani": 94.9205,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum brasilense",
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                "accession": "GCA_002027385.1",
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                "species_taxid": 192,
                "relation_to_type": "type",
                "validated": true,
                "ani": 94.9191,
                "matched_fragments": 1985,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum formosense",
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                "accession": "GCA_013340925.1",
                "taxid": 861533,
                "species_taxid": 861533,
                "relation_to_type": "type",
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                "matched_fragments": 1577,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum tabaci",
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                "species_taxid": 2752310,
                "relation_to_type": "type",
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                "matched_fragments": 1842,
                "total_fragments": 2558,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum cavernae",
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                "accession": "GCA_003590795.1",
                "taxid": 2320860,
                "species_taxid": 2320860,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0086,
                "matched_fragments": 1011,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenibaculum pallidiluteum",
                "strain": "strain=SYSU D00532",
                "accession": "GCA_017355985.1",
                "taxid": 2812559,
                "species_taxid": 2812559,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2044,
                "matched_fragments": 716,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elioraea tepida",
                "strain": "strain=MS-P2",
                "accession": "GCA_019203965.1",
                "taxid": 2843330,
                "species_taxid": 2843330,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
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        "gtdb_result": [
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                "accession": "GCF_003119195.2",
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                "matched_fragments": 2552,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum",
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    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}