{ "type": "genome", "identifier": "GCF_003202285.1", "organism": "Prauserella muralis", "title": "Prauserella muralis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Bielefeld University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003202285.1", "bioproject": "PRJNA224116", "biosample": "SAMN05284053", "wgs_master": "MASW00000000.1", "refseq_category": "reference genome", "taxid": "588067", "species_taxid": "588067", "organism_name": "Prauserella muralis", "infraspecific_name": "strain=DSM 45305", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/07/02", "asm_name": "ASM320228v1", "asm_submitter": "Bielefeld University", "gbrs_paired_asm": "GCA_003202285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/202/285/GCF_003202285.1_ASM320228v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7467757", "genome_size_ungapped": "7467757", "gc_percent": "71.000000", "replicon_count": "1", "scaffold_count": "24", "contig_count": "24", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003202285.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "7407", "protein_coding_gene_count": "7265", "non_coding_gene_count": "63", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-07-02", "dateModified": "2018-07-02", "datePublished": "2018-07-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Prauserella muralis" ], "sample_taxid": [ "588067" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Berlin" ], "sample_host_location_id": [], "data_size": "1.996 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 2.78, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7467757", "Number of Sequences": "24", "Longest Sequences (bp)": "2092511", "N50 (bp)": "1738757", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.2", "Number of CDSs": "7434", "Average Protein Length": "307.1", "Coding Ratio (%)": "91.7", "Number of rRNAs": "11", "Number of tRNAs": "69", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Prauserella muralis", "strain": "strain=DSM 45305", "accession": "GCA_003202285.1", "taxid": 588067, "species_taxid": 588067, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2475, "total_fragments": 2478, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prauserella muralis", "strain": "strain=DSM 45305", "accession": "GCA_007993965.1", "taxid": 588067, "species_taxid": 588067, "relation_to_type": "type", "validated": true, "ani": 99.9986, "matched_fragments": 2472, "total_fragments": 2478, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prauserella cavernicola", "strain": "strain=ASG 168", "accession": "GCA_016595675.1", "taxid": 2800127, "species_taxid": 2800127, "relation_to_type": "type", "validated": true, "ani": 82.7211, "matched_fragments": 1295, "total_fragments": 2478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis arida", "strain": "strain=CGMCC 4.5579", "accession": "GCA_900115565.1", "taxid": 587909, "species_taxid": 587909, "relation_to_type": "type", "validated": true, "ani": 80.9849, "matched_fragments": 1146, "total_fragments": 2478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis 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"accession": "GCA_003385215.1", "taxid": 944492, "species_taxid": 944492, "relation_to_type": "type", "validated": true, "ani": 80.6612, "matched_fragments": 1163, "total_fragments": 2478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prauserella marina", "strain": "strain=DSM 45268", "accession": "GCA_003182115.1", "taxid": 530584, "species_taxid": 530584, "relation_to_type": "type", "validated": true, "ani": 80.6285, "matched_fragments": 1111, "total_fragments": 2478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis methanolica", "strain": "strain=239", "accession": "GCA_000739085.1", "taxid": 1814, "species_taxid": 1814, "relation_to_type": "type", "validated": true, "ani": 80.5602, "matched_fragments": 1146, "total_fragments": 2478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis methanolica", "strain": "strain=239", "accession": "GCA_000371885.1", "taxid": 1814, "species_taxid": 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