{ "type": "genome", "identifier": "GCF_003226595.1", "organism": "Modestobacter versicolor", "title": "Modestobacter versicolor", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Arizona State Unversity", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003226595.1", "bioproject": "PRJNA224116", "biosample": "SAMN09291351", "wgs_master": "QKNV00000000.1", "refseq_category": "na", "taxid": "429133", "species_taxid": "429133", "organism_name": "Modestobacter versicolor", "infraspecific_name": "strain=CP153-2", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/06/13", "asm_name": "ASM322659v1", "asm_submitter": "Arizona State Unversity", "gbrs_paired_asm": "GCA_003226595.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/226/595/GCF_003226595.1_ASM322659v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4518559", "genome_size_ungapped": "4518559", "gc_percent": "74.500000", "replicon_count": "0", "scaffold_count": "764", "contig_count": "764", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003226595.1-RS_2024_08_03", "annotation_date": "2024-08-03", "total_gene_count": "4891", "protein_coding_gene_count": "4599", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-06-13", "dateModified": "2018-06-13", "datePublished": "2018-06-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Modestobacter versicolor" ], "sample_taxid": [ "429133" ], "sample_host_organism": [ "Not Applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "1.181 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 15.0, "max": 15.0 }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4518559", "Number of Sequences": "764", "Longest Sequences (bp)": "59298", "N50 (bp)": "12429", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "74.3", "Number of CDSs": "3911", "Average Protein Length": "298.2", "Coding Ratio (%)": "77.4", "Number of rRNAs": "3", "Number of tRNAs": "55", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Modestobacter versicolor", "strain": "strain=CP153-2", "accession": "GCA_003226595.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1188, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Modestobacter versicolor", "strain": "strain=DSM 16678", "accession": "GCA_014195485.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 99.9688, "matched_fragments": 1196, "total_fragments": 1198, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Modestobacter excelsi", "strain": "strain=1G6", "accession": "GCA_005930495.1", "taxid": 2213161, "species_taxid": 2213161, "relation_to_type": "type", "validated": true, "ani": 87.2359, "matched_fragments": 863, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter altitudinis", "strain": "strain=1G4", "accession": "GCA_005930475.1", "taxid": 2213158, "species_taxid": 2213158, "relation_to_type": "type", "validated": true, "ani": 87.2188, "matched_fragments": 922, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter caceresii", "strain": "strain=KNN 45-2b", "accession": "GCA_000761485.1", "taxid": 1522368, "species_taxid": 1522368, "relation_to_type": "type", "validated": true, "ani": 86.2924, "matched_fragments": 892, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter marinus", "strain": "strain=CGMCC 4.5581", "accession": "GCA_014645755.1", "taxid": 477641, "species_taxid": 477641, "relation_to_type": "type", "validated": true, "ani": 86.1895, "matched_fragments": 918, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter marinus", "strain": "strain=DSM 45201", "accession": "GCA_011758655.1", "taxid": 477641, "species_taxid": 477641, "relation_to_type": "type", "validated": true, "ani": 86.1351, "matched_fragments": 937, "total_fragments": 1198, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter muralis", "strain": "strain=DSM 100205", 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"coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Modestobacter", "versicolor" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }