{ "type": "genome", "identifier": "GCF_003258295.1", "organism": "Streptacidiphilus pinicola", "title": "Streptacidiphilus pinicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ministry of Food and Drug Safety", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003258295.1", "bioproject": "PRJNA224116", "biosample": "SAMN09389194", "wgs_master": "QKYN00000000.1", "refseq_category": "reference genome", "taxid": "2219663", "species_taxid": "2219663", "organism_name": "Streptacidiphilus pinicola", "infraspecific_name": "strain=MMS16-CNU450", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/06/20", "asm_name": "ASM325829v1", "asm_submitter": "Ministry of Food and Drug Safety", "gbrs_paired_asm": "GCA_003258295.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/258/295/GCF_003258295.1_ASM325829v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8432874", "genome_size_ungapped": "8424182", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "281", "contig_count": "281", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003258295.1-RS_2024_04_17", "annotation_date": "2024-04-17", "total_gene_count": "7868", "protein_coding_gene_count": "7517", "non_coding_gene_count": "79", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-06-20", "dateModified": "2018-06-20", "datePublished": "2018-06-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptacidiphilus pinicola" ], "sample_taxid": [ "2219663" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "2.277 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 97.92, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "8432874", "Number of Sequences": "281", "Longest Sequences (bp)": "208066", "N50 (bp)": "56286", "Gap Ratio (%)": "0.103488", "GCcontent (%)": "71.8", "Number of CDSs": "7643", "Average Protein Length": "317.9", "Coding Ratio (%)": "86.4", "Number of rRNAs": "5", "Number of tRNAs": "84", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptacidiphilus pinicola", "strain": "strain=MMS16-CNU450", "accession": "GCA_003258295.1", "taxid": 2219663, "species_taxid": 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