{ "tc_result": [ { "organism_name": "Metamycoplasma anseris", "strain": "strain=ATCC 49234", "accession": "GCA_003285045.1", "taxid": 92400, "species_taxid": 92400, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 248, "total_fragments": 250, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Metamycoplasma anseris", "strain": "strain=ATCC 49234", "accession": "GCA_000702805.1", "taxid": 92400, "species_taxid": 92400, "relation_to_type": "type", "validated": true, "ani": 99.9659, "matched_fragments": 231, "total_fragments": 250, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Metamycoplasma cloacale", "strain": "strain=NCTC 10199", "accession": "GCA_003269445.1", "taxid": 92401, "species_taxid": 92401, "relation_to_type": "type", "validated": true, "ani": 80.1417, "matched_fragments": 106, "total_fragments": 250, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma cloacale", "strain": "strain=NCTC10199", "accession": "GCA_900660735.1", "taxid": 92401, "species_taxid": 92401, "relation_to_type": "type", "validated": true, "ani": 80.1301, "matched_fragments": 108, "total_fragments": 250, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma cloacale", "strain": "strain=ATCC 35276", "accession": "GCA_000702745.1", "taxid": 92401, "species_taxid": 92401, "relation_to_type": "type", "validated": true, "ani": 79.8562, "matched_fragments": 105, "total_fragments": 250, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycoplasma struthionis", "strain": "strain=237IA", "accession": "GCA_003855455.1", "taxid": 538220, "species_taxid": 538220, "relation_to_type": "type", "validated": true, "ani": 78.9674, "matched_fragments": 73, "total_fragments": 250, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma auris", "strain": "strain=ATCC 51348", "accession": "GCA_003253435.1", "taxid": 51363, "species_taxid": 51363, "relation_to_type": "type", "validated": true, "ani": 78.6249, "matched_fragments": 56, "total_fragments": 250, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 2.08, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000702805.1", "gtdb_species": "s__Metamycoplasma anseris", "ani": 99.9659, "matched_fragments": 231, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_900660735.1", "gtdb_species": "s__Metamycoplasma cloacale", "ani": 80.1301, "matched_fragments": 108, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003855455.1", "gtdb_species": "s__Metamycoplasma struthionis", "ani": 78.9537, "matched_fragments": 72, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "98.82", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_012934885.1", "gtdb_species": "s__Metamycoplasma sp012934885", "ani": 78.7994, "matched_fragments": 55, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.25", "min_intra_species_ani": "98.25", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900660445.2", "gtdb_species": "s__Metamycoplasma salivarium", "ani": 78.661, "matched_fragments": 66, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003253435.1", "gtdb_species": "s__Metamycoplasma auris", "ani": 78.6249, "matched_fragments": 56, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000420105.1", "gtdb_species": "s__Metamycoplasma orale", "ani": 78.0417, "matched_fragments": 62, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006385185.1", "gtdb_species": "s__Metamycoplasma equirhinis", "ani": 77.946, "matched_fragments": 61, "total_fragments": 250, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }