# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_40	LOCUS_00400	sequence01:43826..44953(-)	partial			WP_002210737.1	cell envelope integrity protein TolA	35.5	34.8	66.9
MGA_72	LOCUS_00720	sequence01:78826..80316(-)	partial			WP_011816827.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	99.6	73.1	84.1
MGA_105	LOCUS_01050	sequence01:113728..113940(+)	frameshift		113937,113980	WP_004266874.1	ABC transporter ATP-binding protein	98.6	27.0	58.0
MGA_109	LOCUS_01090	sequence01:116857..117048(+)	partial			WP_005172354.1	YpfN family protein	50.8	50.0	68.8
MGA_133	LOCUS_01330	sequence01:142253..142852(-)	frameshift		142270	WP_015705947.1	copper homeostasis membrane protein CopD	96.5	66.1	37.5
MGA_257	LOCUS_02570	sequence01:284046..284573(-)	frameshift		284598	WP_003246337.1	asparaginase AnsZ	100.0	47.2	53.4
MGA_258	LOCUS_02580	sequence01:284596..285078(-)	frameshift		284598	WP_003246337.1	asparaginase AnsZ	88.8	37.9	58.5
MGA_261	LOCUS_02610	sequence01:285975..286340(+)	partial			WP_046463327.1	alpha/beta fold hydrolase	95.0	32.0	53.4
MGA_262	LOCUS_02620	sequence01:286429..287694(+)	partial			WP_235045006.1	SpoIIE family protein phosphatase	64.6	39.8	31.2
MGA_265	LOCUS_02650	sequence01:288673..289380(+)	partial			WP_003082226.1	diguanylate cyclase RoeA	76.2	47.0	38.5
MGA_270	LOCUS_02700	sequence01:293677..294546(+)	partial			WP_011969812.1	urea ABC transporter permease subunit UrtB	90.7	51.0	36.6
MGA_291	LOCUS_02910	sequence01:316999..317457(-)	internal_stop_codon	317509..317511(-)		WP_002208561.1	hypothetical protein	90.1	59.3	44.5
MGA_317	LOCUS_03160	sequence02:30007..30516(+)	partial			WP_011815433.1	LysM-like peptidoglycan-binding domain-containing protein	100.0	63.4	52.1
MGA_340	LOCUS_03390	sequence02:50357..51856(+)	partial			WP_011104008.1	PAS domain S-box protein	51.1	35.9	38.1
MGA_341	LOCUS_03400	sequence02:51870..52103(+)	frameshift,internal_stop_codon	52101..52103(+)	51841	WP_010956680.1	sensor domain-containing diguanylate cyclase	97.4	20.2	41.3
MGA_377	LOCUS_03760	sequence02:91868..92530(-)	internal_stop_codon	92564..92566(-)		WP_005769235.1	ATP-binding protein	99.1	48.4	67.6
MGA_378	LOCUS_03770	sequence02:92564..93205(-)	internal_stop_codon	92564..92566(-)		WP_005769235.1	ATP-binding protein	100.0	47.5	56.3
MGA_399	LOCUS_03980	sequence02:120089..120277(+)	partial			WP_005167089.1	DNA gyrase inhibitor YacG	75.8	69.1	70.2
MGA_402	LOCUS_04010	sequence02:123727..124110(-)	partial			WP_005156845.1	secA translation cis-regulator SecM	96.9	73.4	48.9
MGA_420	LOCUS_04190	sequence02:143564..143734(+)	internal_stop_codon	143732..143734(+)		WP_026017956.1	L-alanine exporter AlaE	100.0	38.4	80.4
MGA_421	LOCUS_04200	sequence02:143762..144004(+)	internal_stop_codon	143732..143734(+)		WP_002210446.1	L-alanine exporter AlaE	96.2	52.7	68.8
MGA_432	LOCUS_04310	sequence02:157772..158176(+)	frameshift		158125	WP_001287501.1	N(6)-hydroxylysine O-acetyltransferase IucB	97.8	41.6	46.6
MGA_433	LOCUS_04320	sequence02:158106..158717(+)	frameshift		158110	WP_002211649.1	GNAT family N-acetyltransferase	98.0	63.0	72.9
MGA_448	LOCUS_04470	sequence03:259..552(+)	partial			WP_000212768.1	phage tail tape measure protein	90.7	8.3	43.3
MGA_453	LOCUS_04520	sequence03:3056..4399(+)	internal_stop_codon	4397..4399(+)		WP_002211698.1	host specificity protein J	99.1	41.3	71.3
MGA_454	LOCUS_04530	sequence03:4469..6565(+)	internal_stop_codon	4397..4399(+)		WP_013096345.1	phage tail protein	99.4	61.5	41.4
MGA_458	LOCUS_04570	sequence03:7687..9240(+)	partial			WP_002211696.1	hypothetical protein	25.3	43.0	43.2
MGA_465	LOCUS_04640	sequence03:17634..17966(+)	partial			WP_000971918.1	GspS family T2SS pilot lipoprotein variant EptO	87.3	72.2	45.8
MGA_467	LOCUS_04660	sequence03:20590..21453(+)	partial			WP_001302175.1	type II secretion system protein GspC	70.4	71.5	40.5
MGA_495	LOCUS_04940	sequence03:51647..51835(+)	frameshift		51829	WP_002209714.1	elongation factor P hydroxylase	85.5	29.4	77.4
MGA_496	LOCUS_04950	sequence03:51810..52205(+)	frameshift		51829	WP_015365544.1	elongation factor P hydroxylase	98.5	70.9	75.2
MGA_558	LOCUS_05570	sequence03:119269..119598(+)	frameshift		119556	WP_005173946.1	hydrogenase-2 assembly chaperone	67.0	42.4	61.6
MGA_559	LOCUS_05580	sequence03:119484..119810(+)	frameshift		119556	WP_005173946.1	hydrogenase-2 assembly chaperone	71.3	49.4	58.8
MGA_576	LOCUS_05750	sequence03:137429..138943(-)	internal_stop_codon	137429..137431(-)		WP_011086964.1	methyl-accepting chemotaxis protein	87.9	67.2	35.6
MGA_586	LOCUS_05850	sequence03:146811..147581(+)	partial			WP_010967548.1	TSUP family transporter	44.1	62.4	83.2
MGA_587	LOCUS_05860	sequence03:147930..148373(+)	partial			WP_013096167.1	MFS transporter	83.7	31.1	74.0
MGA_591	LOCUS_05900	sequence03:151688..152380(+)	internal_stop_codon	151544..151546(+)		WP_011970704.1	LysR family transcriptional regulator	93.9	70.7	37.8
MGA_592	LOCUS_05910	sequence03:152310..152792(-)	frameshift		152812	WP_015703850.1	helix-turn-helix domain-containing protein	82.5	41.6	61.4
MGA_593	LOCUS_05920	sequence03:152786..153205(-)	frameshift		152812	WP_015703850.1	helix-turn-helix domain-containing protein	95.7	42.0	62.4
MGA_595	LOCUS_05940	sequence03:154429..154626(-)	frameshift		154625	WP_013533608.1	5-aminolevulinate synthase	70.8	10.8	71.7
MGA_596	LOCUS_05950	sequence03:154623..154961(-)	frameshift		154625	WP_004596804.1	5-aminolevulinate synthase	93.8	25.4	48.6
MGA_597	LOCUS_05960	sequence03:155360..156100(-)	internal_stop_codon	155360..155362(-)		WP_010945938.1	MFS transporter	96.3	62.0	31.8
MGA_600	LOCUS_05980	sequence04:727..1293(-)	partial			WP_000091796.1	MFS transporter	81.4	36.7	66.7
MGA_601	LOCUS_05990	sequence04:1292..1621(+)	partial			WP_011816301.1	LysR family transcriptional regulator	96.3	34.7	73.3
MGA_610	LOCUS_06080	sequence04:9673..9972(+)	partial			WP_015063849.1	pyridoxine/pyridoxal/pyridoxamine kinase	79.8	26.4	59.5
MGA_611	LOCUS_06090	sequence04:10041..10424(-)	partial			WP_011103212.1	type III secretion system effector protein	91.3	52.3	47.9
MGA_637	LOCUS_06350	sequence04:40999..41184(+)	partial			WP_005615166.1	tyrosine-type recombinase/integrase	98.4	18.2	56.9
MGA_645	LOCUS_06430	sequence04:47746..48270(-)	partial			WP_011084579.1	nitrogen fixation protein NifQ	62.1	40.4	41.4
MGA_648	LOCUS_06460	sequence04:51458..52942(-)	partial			WP_011389419.1	EAL domain-containing protein	22.9	14.8	45.1
MGA_655	LOCUS_06530	sequence04:58187..58447(+)	partial			WP_004192405.1	RnfH family protein	84.9	68.2	37.0
MGA_657	LOCUS_06550	sequence04:59096..59947(-)	partial			WP_003105307.1	peptidylprolyl isomerase	65.4	64.3	28.7
MGA_658	LOCUS_06560	sequence04:59934..60380(-)	partial			WP_028153326.1	nitrogen fixation protein NifZ	50.7	72.1	48.0
MGA_675	LOCUS_06730	sequence04:75426..76772(-)	frameshift		76762	WP_011140960.1	urea carboxylase	77.9	28.4	58.9
MGA_676	LOCUS_06740	sequence04:76673..77698(-)	frameshift		76765	WP_010919695.1	urea carboxylase	91.8	26.0	62.4
MGA_683	LOCUS_06810	sequence04:81647..82138(-)	frameshift		82151	WP_015704285.1	hemagglutinin repeat-containing protein	100.0	6.2	79.8
MGA_684	LOCUS_06820	sequence04:82119..82676(-)	frameshift		82151	WP_015704285.1	hemagglutinin repeat-containing protein	94.1	6.7	42.2
MGA_685	LOCUS_06830	sequence04:82681..83655(-)	internal_stop_codon	83680..83682(-)		WP_054181051.1	hemagglutinin repeat-containing protein	97.5	10.8	32.7
MGA_686	LOCUS_06840	sequence04:83680..84036(-)	frameshift,internal_stop_codon	83679..83681(-)	84113	WP_015704132.1	hemagglutinin repeat-containing protein	95.8	3.4	60.2
MGA_687	LOCUS_06850	sequence04:84090..84359(-)	frameshift		84113	WP_054181051.1	hemagglutinin repeat-containing protein	89.9	2.5	57.5
MGA_688	LOCUS_06860	sequence04:84408..85334(-)	frameshift		85399	WP_015704133.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	100.0	55.7	55.5
MGA_692	LOCUS_06900	sequence04:92995..94419(+)	partial			WP_005763926.1	pectate lyase	48.5	55.9	47.5
MGA_708	LOCUS_07060	sequence04:105077..106621(-)	partial			WP_011269126.1	transporter substrate-binding domain-containing protein	70.0	53.9	30.7
MGA_716	LOCUS_07140	sequence04:114120..115208(+)	partial			WP_011103535.1	type III secretion protein hrcQa	54.7	81.9	30.3
MGA_752	LOCUS_07500	sequence04:154174..154482(+)	frameshift		154464	WP_002354621.1	Hcp family type VI secretion system effector	96.1	61.6	57.1
MGA_760	LOCUS_07570	sequence05:2708..4339(-)	frameshift		4377	WP_224144836.1	hemagglutinin repeat-containing protein	99.3	17.8	50.5
MGA_761	LOCUS_07580	sequence05:4375..5700(-)	frameshift		5761,4383	WP_015704285.1	hemagglutinin repeat-containing protein	99.8	17.1	47.5
MGA_762	LOCUS_07590	sequence05:5756..7090(-)	frameshift		7164,5766	WP_015704285.1	hemagglutinin repeat-containing protein	99.8	17.6	47.7
MGA_763	LOCUS_07600	sequence05:6997..8436(-)	frameshift		7164,8477	WP_015704285.1	hemagglutinin repeat-containing protein	74.1	15.1	37.9
MGA_764	LOCUS_07610	sequence05:8439..9017(-)	frameshift		8476,9013	WP_002213819.1	contact-dependent inhibition toxin CdiA	95.3	7.2	69.4
MGA_778	LOCUS_07750	sequence05:20517..21356(-)	internal_stop_codon	21357..21359(-)		WP_064242873.1	ABC transporter ATP-binding protein	98.2	50.6	52.4
MGA_779	LOCUS_07760	sequence05:21357..22103(-)	internal_stop_codon	21357..21359(-)		WP_003536648.1	ABC transporter ATP-binding protein	93.1	42.5	60.6
MGA_790	LOCUS_07870	sequence05:33769..34044(-)	partial			WP_000144875.1	type I-E CRISPR-associated endonuclease Cas1e	97.8	29.1	73.0
MGA_791	LOCUS_07880	sequence05:34037..35122(-)	partial			WP_001233978.1	CRISPR-associated helicase/endonuclease Cas3	95.3	37.4	52.9
MGA_792	LOCUS_07890	sequence05:35085..36113(-)	partial			WP_001233978.1	CRISPR-associated helicase/endonuclease Cas3	93.9	35.7	41.5
MGA_793	LOCUS_07900	sequence05:36187..36903(-)	partial			WP_002228151.1	polymer-forming cytoskeletal protein	66.8	75.3	29.2
MGA_921	LOCUS_09160	sequence06:30324..31418(-)	partial			WP_003114745.1	GGDEF domain-containing protein	43.4	30.1	42.8
MGA_952	LOCUS_09470	sequence06:70053..70880(-)	frameshift		70966	WP_011817287.1	sensor domain-containing diguanylate cyclase	97.5	51.1	58.6
MGA_953	LOCUS_09480	sequence06:70952..71164(-)	frameshift		70965,71214	WP_011817287.1	sensor domain-containing diguanylate cyclase	91.4	12.3	65.6
MGA_954	LOCUS_09490	sequence06:71158..71577(-)	frameshift		71217,70965	WP_011817287.1	sensor domain-containing diguanylate cyclase	86.3	23.1	57.5
MGA_962	LOCUS_09570	sequence06:80167..82509(-)	partial			WP_000469162.1	tail fiber protein	9.5	24.4	62.2
MGA_964	LOCUS_09590	sequence06:83400..84158(-)	partial			WP_000135569.1	phage tail protein	65.9	38.4	41.7
MGA_1006	LOCUS_10010	sequence06:109828..110322(-)	internal_stop_codon	110326..110328(-)		WP_011072600.1	AAA family ATPase	97.6	49.4	59.4
MGA_1007	LOCUS_10020	sequence06:110326..110784(-)	internal_stop_codon	110326..110328(-)		WP_005708986.1	AAA family ATPase	82.9	41.3	50.0
MGA_1008	LOCUS_10030	sequence06:110797..112299(-)	partial			WP_011072599.1	transposase domain-containing protein	93.0	70.0	56.2
MGA_1014	LOCUS_10080	sequence07:1803..2603(-)	partial			WP_010946820.1	tyrosine-type recombinase/integrase	66.5	37.0	33.5
MGA_1045	LOCUS_10390	sequence07:35531..35917(-)	partial			WP_005173236.1	YqcC family protein	66.4	77.3	62.4
MGA_1054	LOCUS_10480	sequence07:43748..44503(+)	frameshift		44287	WP_013098537.1	cysteine desulfurase CsdA	97.6	60.8	55.1
MGA_1055	LOCUS_10490	sequence07:44500..44955(+)	frameshift		44287	WP_046050350.1	cysteine desulfurase CsdA	100.0	37.7	66.9
MGA_1058	LOCUS_10520	sequence07:46317..46478(-)	frameshift		46494	WP_011816989.1	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	98.1	6.8	80.8
MGA_1084	LOCUS_10780	sequence07:80832..83792(-)	partial			WP_167355187.1	autotransporter domain-containing protein	83.0	51.6	26.2
MGA_1091	LOCUS_10850	sequence07:88783..89616(+)	frameshift		89595	WP_162992380.1	AraC family transcriptional regulator	96.8	76.0	27.0
MGA_1102	LOCUS_10960	sequence08:1288..2475(-)	partial			WP_010931799.1	HlyD family secretion protein	62.3	64.5	26.8
MGA_1124	LOCUS_11180	sequence08:29764..30033(+)	internal_stop_codon	30031..30033(+)		WP_013094984.1	DNA-3-methyladenine glycosylase I	100.0	46.1	74.2
MGA_1125	LOCUS_11190	sequence08:30076..30327(+)	internal_stop_codon	30031..30033(+)		WP_002209626.1	DNA-3-methyladenine glycosylase I	96.4	42.1	72.5
MGA_1130	LOCUS_11240	sequence08:35136..36023(+)	frameshift		35993	WP_002228155.1	valine--pyruvate transaminase	97.3	68.2	84.3
MGA_1131	LOCUS_11250	sequence08:36004..36363(+)	frameshift		35993	WP_005175114.1	valine--pyruvate transaminase	96.6	27.6	81.7
MGA_1137	LOCUS_11310	sequence08:43273..43554(-)	partial			WP_088499789.1	IS3 family transposase	73.1	29.6	85.3
MGA_1138	LOCUS_11320	sequence08:43882..44556(-)	partial			WP_002214794.1	S-type pyocin domain-containing protein	26.8	11.3	46.7
MGA_1140	LOCUS_11340	sequence08:45879..46979(-)	partial			WP_010969952.1	ABC transporter permease	66.9	84.8	60.4
MGA_1177	LOCUS_11710	sequence08:89783..90607(-)	partial			WP_000711572.1	arginase	62.4	62.6	26.3
MGA_1190	LOCUS_11840	sequence09:11359..12165(-)	partial			WP_003907117.1	radical SAM protein	48.5	17.1	27.8
MGA_1220	LOCUS_12140	sequence09:44567..44962(-)	partial			WP_019080295.1	cell-envelope stress modulator CpxP	90.8	73.9	59.8
MGA_1237	LOCUS_12310	sequence09:63865..64350(-)	frameshift		64364	WP_005176349.1	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	99.4	62.7	88.8
MGA_1238	LOCUS_12320	sequence09:64347..64613(-)	frameshift		64364	WP_013099129.1	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	92.0	31.8	82.7
MGA_1240	LOCUS_12340	sequence09:65878..66114(-)	frameshift		66124	WP_005163935.1	high-affinity branched-chain amino acid ABC transporter permease LivH	100.0	41.9	57.4
MGA_1241	LOCUS_12350	sequence09:66122..66652(-)	frameshift		66124	WP_005163935.1	high-affinity branched-chain amino acid ABC transporter permease LivH	100.0	57.1	86.4
MGA_1247	LOCUS_12410	sequence09:71613..72863(-)	partial			WP_002230068.1	signal recognition particle-docking protein FtsY	76.2	58.6	88.0
MGA_1262	LOCUS_12560	sequence09:86361..88214(+)	partial			WP_226169976.1	type VI secretion system tip protein TssI/VgrG	98.9	66.9	63.3
MGA_1264	LOCUS_12580	sequence09:88644..91067(+)	frameshift		90896	WP_001289110.1	RHS repeat-associated core domain-containing protein	87.9	45.7	34.6
MGA_1265	LOCUS_12590	sequence09:90964..92679(+)	frameshift		90896	WP_024198412.1	RHS repeat protein	89.3	69.1	39.5
MGA_1271	LOCUS_12630	sequence10:5171..6070(-)	frameshift		6194	WP_011817019.1	peptide chain release factor 2	99.3	81.4	91.2
MGA_1302	LOCUS_12940	sequence10:36187..36987(+)	partial			WP_173426820.1	tetratricopeptide repeat protein	93.2	64.9	42.2
MGA_1321	LOCUS_13130	sequence10:54034..54297(-)	frameshift		54490	WP_005764783.1	SDR family NAD(P)-dependent oxidoreductase	98.9	34.0	75.6
MGA_1322	LOCUS_13140	sequence10:54260..54805(-)	frameshift		54490	WP_011268748.1	SDR family NAD(P)-dependent oxidoreductase	53.0	37.9	60.4
MGA_1349	LOCUS_13410	sequence10:84241..87324(-)	partial			WP_011268607.1	non-ribosomal peptide synthetase	94.4	14.4	30.4
MGA_1351	LOCUS_13430	sequence10:88404..89915(+)	frameshift,internal_stop_codon	89905..89907(+)	89891	WP_000503026.1	non-ribosomal peptide synthetase	98.6	23.1	41.8
MGA_1352	LOCUS_13440	sequence10:89926..90198(+)	partial			WP_005110759.1	condensation domain-containing protein	72.2	3.3	40.0
MGA_1353	LOCUS_13450	sequence11:197..337(-)	frameshift,internal_stop_codon	196..198(-)	348	WP_002212253.1	low affinity potassium transporter Kup	97.8	7.2	57.8
MGA_1368	LOCUS_13600	sequence11:14301..14678(-)	partial			WP_000764211.1	ester cyclase	99.2	71.3	46.0
MGA_1369	LOCUS_13610	sequence11:15228..15566(-)	frameshift		15574	WP_000602824.1	LD-carboxypeptidase	97.3	32.7	59.6
MGA_1370	LOCUS_13620	sequence11:15554..16237(-)	frameshift		15577	WP_000964925.1	LD-carboxypeptidase	95.6	64.1	60.4
MGA_1397	LOCUS_13890	sequence11:43483..44283(+)	frameshift		44223	WP_002209361.1	Fe(3+)-hydroxamate ABC transporter permease FhuB	87.2	34.9	66.4
MGA_1398	LOCUS_13900	sequence11:44228..45472(+)	frameshift		44223	WP_002209361.1	Fe(3+)-hydroxamate ABC transporter permease FhuB	100.0	62.1	62.8
MGA_1415	LOCUS_14070	sequence11:61975..62322(-)	frameshift		62329	WP_028174055.1	nitrile hydratase subunit alpha	96.5	53.4	76.6
MGA_1416	LOCUS_14080	sequence11:62288..62587(-)	frameshift		62335	WP_011976133.1	nitrile hydratase subunit alpha	80.8	37.6	62.5
MGA_1449	LOCUS_14410	sequence12:10541..11362(+)	frameshift		11296	WP_000948703.1	glycerol-3-phosphate transporter	92.7	56.0	87.7
MGA_1450	LOCUS_14420	sequence12:11304..11891(+)	frameshift		11299	WP_011815349.1	glycerol-3-phosphate transporter	99.5	42.7	85.1
MGA_1453	LOCUS_14450	sequence12:13994..14302(+)	frameshift		14278	WP_005176125.1	homoserine/homoserine lactone efflux protein	96.1	47.6	75.5
MGA_1454	LOCUS_14460	sequence12:14263..14568(+)	frameshift		14278	WP_005176125.1	homoserine/homoserine lactone efflux protein	99.0	48.5	76.0
MGA_1457	LOCUS_14490	sequence12:17753..18388(+)	frameshift		18337	WP_002211481.1	EamA family transporter RarD	92.4	65.9	70.3
MGA_1458	LOCUS_14500	sequence12:18364..18681(+)	frameshift		18340	WP_015368860.1	EamA family transporter RarD	87.6	31.0	72.8
MGA_1467	LOCUS_14590	sequence12:27756..27908(+)	partial			WP_002211469.1	iron donor protein CyaY	98.0	46.2	65.3
MGA_1504	LOCUS_14960	sequence12:72303..72680(-)	partial			WP_029409206.1	RHS repeat-associated core domain-containing protein	70.4	30.8	41.7
MGA_1519	LOCUS_15110	sequence13:3487..3963(+)	frameshift,internal_stop_codon	3943..3945(+)	3864	WP_011815872.1	sensor histidine kinase	91.8	25.6	75.2
MGA_1520	LOCUS_15120	sequence13:3996..5213(+)	frameshift,internal_stop_codon	3943..3945(+)	3870	WP_011815872.1	sensor histidine kinase	96.3	68.7	78.2
MGA_1521	LOCUS_15130	sequence13:5210..5833(+)	frameshift		5797	WP_005172160.1	LytTR family DNA-binding domain-containing protein	95.2	78.9	77.8
MGA_1528	LOCUS_15200	sequence13:13896..14237(+)	partial			WP_023616141.1	translation initiation factor IF-3	100.0	62.8	86.7
MGA_1537	LOCUS_15290	sequence13:22554..22736(-)	frameshift		22869	WP_001010658.1	cystine/sulfocysteine:cation symporter	100.0	13.0	83.3
MGA_1538	LOCUS_15300	sequence13:22681..23910(-)	frameshift		22869	WP_046050999.1	L-cystine transporter	85.1	74.9	74.7
MGA_1579	LOCUS_15710	sequence13:61934..62065(+)	internal_stop_codon	62063..62065(+)		WP_013096146.1	YcgL domain-containing protein	100.0	47.3	93.0
MGA_1596	LOCUS_15880	sequence13:78222..78569(-)	partial			WP_011071010.1	DNA adenine methylase	93.9	42.7	69.4
MGA_1599	LOCUS_15910	sequence13:79966..80211(+)	partial			WP_000808005.1	contractile injection system protein, VgrG/Pvc8 family	98.8	20.3	75.0
MGA_1605	LOCUS_15970	sequence13:83761..84186(+)	internal_stop_codon	84184..84186(+)		WP_000002046.1	phage tail protein	100.0	41.3	56.0
MGA_1606	LOCUS_15980	sequence13:84238..85593(+)	internal_stop_codon	84184..84186(+)		WP_000216486.1	prophage tail fiber N-terminal domain-containing protein	89.8	35.9	30.4
MGA_1655	LOCUS_16470	sequence14:56153..57544(-)	partial			WP_012027425.1	beta-glucoside-specific PTS transporter subunit IIABC	97.6	71.6	37.9
MGA_1665	LOCUS_16570	sequence14:66161..67672(-)	internal_stop_codon	67688..67690(-)		WP_015154897.1	TonB-dependent siderophore receptor	99.8	57.4	38.7
MGA_1666	LOCUS_16580	sequence14:67688..68524(-)	internal_stop_codon	67688..67690(-)		WP_011388640.1	TonB-dependent siderophore receptor	99.3	34.4	38.7
MGA_1699	LOCUS_16910	sequence15:25686..25958(-)	partial			WP_002211221.1	phosphatase	98.9	44.5	62.4
MGA_1717	LOCUS_17090	sequence15:39176..39439(-)	partial			WP_013384052.1	hypothetical protein	43.7	80.9	68.4
MGA_1719	LOCUS_17110	sequence15:39847..40407(-)	frameshift		40466	WP_013368417.1	TrbI/VirB10 family protein	97.8	48.0	80.2
MGA_1720	LOCUS_17120	sequence15:40371..41021(-)	frameshift		40466	WP_013368417.1	TrbI/VirB10 family protein	81.0	43.0	60.0
MGA_1725	LOCUS_17170	sequence15:44253..45080(-)	partial			WP_013368397.1	S26 family signal peptidase	48.7	74.6	68.9
MGA_1730	LOCUS_17220	sequence15:47519..48010(-)	partial			WP_014538228.1	DUF2285 domain-containing protein	98.8	69.9	51.2
MGA_1738	LOCUS_17300	sequence15:52669..54150(-)	frameshift		54215	WP_014490278.1	ParB/RepB/Spo0J family partition protein	97.0	67.9	43.0
MGA_1739	LOCUS_17310	sequence15:54192..54719(-)	frameshift		54215	WP_011074367.1	ParB/RepB/Spo0J family partition protein	86.3	23.9	40.4
MGA_1742	LOCUS_17340	sequence15:55865..56887(+)	frameshift		55706,56819	WP_052729532.1	DNA methyltransferase	91.2	36.0	32.3
MGA_1743	LOCUS_17350	sequence15:56908..57318(+)	frameshift		56818	WP_052729532.1	DNA methyltransferase	87.5	14.5	36.8
MGA_1744	LOCUS_17360	sequence15:57464..59428(+)	frameshift		57625,57604	WP_223495579.1	N-6 DNA methylase	29.1	30.1	30.9
MGA_1745	LOCUS_17370	sequence15:59425..63531(+)	partial			WP_048053708.1	N-6 DNA methylase	30.2	36.3	28.4
MGA_1746	LOCUS_17380	sequence15:63636..64796(-)	frameshift		64858	WP_146312796.1	AAA family ATPase	98.2	43.9	33.0
MGA_1747	LOCUS_17390	sequence15:64721..66169(-)	frameshift		64858	WP_146312796.1	AAA family ATPase	87.1	48.6	33.6
MGA_1762	LOCUS_17540	sequence16:5531..6505(-)	internal_stop_codon	6509..6511(-)		WP_013097232.1	NCS1 family nucleobase:cation symporter-1	94.8	61.2	81.8
MGA_1763	LOCUS_17550	sequence16:6509..7015(-)	internal_stop_codon	6509..6511(-)		WP_015366599.1	NCS1 family nucleobase:cation symporter-1	94.6	31.9	85.5
MGA_1771	LOCUS_17630	sequence16:16376..16600(+)	partial			WP_011705350.1	Flp family type IVb pilin	60.8	67.2	64.4
MGA_1773	LOCUS_17650	sequence16:17206..18147(+)	partial			WP_011205080.1	Flp pilus assembly protein CpaB	79.2	67.7	34.9
MGA_1778	LOCUS_17700	sequence16:23055..24035(+)	partial			WP_004526913.1	type II secretion system F family protein	68.7	66.5	29.5
MGA_1779	LOCUS_17710	sequence16:24055..25014(+)	partial			WP_006310061.1	type II secretion system F family protein	69.9	68.9	39.4
MGA_1786	LOCUS_17780	sequence16:39367..40110(+)	partial			WP_010943408.1	efflux RND transporter periplasmic adaptor subunit	88.7	59.4	26.2
MGA_1788	LOCUS_17800	sequence16:41471..43639(+)	partial			WP_164921556.1	biotin/lipoyl-binding protein	63.3	59.3	26.9
MGA_1795	LOCUS_17870	sequence16:53179..54918(+)	frameshift		54897	WP_206819036.1	TonB-dependent siderophore receptor	89.1	72.2	40.8
MGA_1796	LOCUS_17880	sequence16:54902..55465(+)	frameshift		54900	WP_005478019.1	TonB-dependent siderophore receptor	100.0	26.3	42.2
MGA_1805	LOCUS_17970	sequence16:62688..63431(-)	frameshift,internal_stop_codon	62771..62773(-)	62755,62804	WP_011068063.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	81.4	60.6	38.3
MGA_1810	LOCUS_18020	sequence16:69780..70694(-)	partial			WP_003114361.1	transporter	70.4	65.2	31.1
MGA_1819	LOCUS_18100	sequence17:158..373(+)	partial			WP_015367415.1	heat shock protein HspQ	100.0	70.5	51.4
MGA_1835	LOCUS_18260	sequence17:17307..18293(+)	internal_stop_codon	18291..18293(+)		WP_002430091.1	choline transporter	100.0	47.4	83.8
MGA_1836	LOCUS_18270	sequence17:18390..19004(+)	frameshift,internal_stop_codon	18291..18293(+)	18965	WP_002430091.1	choline transporter	98.0	29.7	78.5
MGA_1837	LOCUS_18280	sequence17:18985..19356(+)	frameshift		18965	WP_002430091.1	choline transporter	99.2	18.6	80.0
MGA_1843	LOCUS_18340	sequence17:24700..25371(-)	partial			WP_005457770.1	flagellin	48.0	28.5	40.2
MGA_1844	LOCUS_18350	sequence17:25606..26166(-)	partial			WP_013096009.1	flagellin FliC	78.0	52.5	54.1
MGA_1845	LOCUS_18360	sequence17:26334..27536(+)	partial			WP_011987017.1	TPR domain-containing glycosyltransferase	86.8	73.2	40.5
MGA_1847	LOCUS_18380	sequence17:28537..32223(-)	partial			WP_157768866.1	glycosyltransferase	71.8	62.1	40.9
MGA_1862	LOCUS_18530	sequence17:45160..45585(+)	partial			WP_071880005.1	flagellar biosynthetic protein FliO	88.7	66.2	56.1
MGA_1910	LOCUS_19010	sequence18:14429..15289(+)	partial			WP_015366906.1	selenium-dependent molybdenum cofactor biosynthesis protein YqeB	89.5	47.3	55.9
MGA_1943	LOCUS_19340	sequence18:60192..61178(-)	partial			WP_169542415.1	hypothetical protein	83.8	51.5	38.8
MGA_1949	LOCUS_19400	sequence18:63511..63882(-)	partial			WP_000793143.1	putative holin	40.7	43.1	64.0
MGA_1950	LOCUS_19410	sequence18:64149..64772(+)	partial			WP_011071010.1	DNA adenine methylase	89.9	73.5	62.9
MGA_1951	LOCUS_19420	sequence19:473..847(-)	partial			WP_013225029.1	TetR/AcrR family transcriptional regulator	48.4	29.3	48.3
MGA_1955	LOCUS_19460	sequence19:4897..5091(-)	partial			WP_011266207.1	NAD(P)H-dependent oxidoreductase	90.6	26.6	55.2
MGA_1976	LOCUS_19670	sequence19:27646..36210(+)	partial			WP_011726611.1	non-ribosomal peptide synthetase	90.1	33.9	32.7
MGA_2012	LOCUS_20030	sequence20:20898..21506(+)	frameshift		21443	WP_011816039.1	envelope biogenesis factor ElyC	89.6	70.2	61.9
MGA_2013	LOCUS_20040	sequence20:21478..21675(+)	frameshift		21443	WP_015704890.1	envelope biogenesis factor ElyC	87.7	22.0	73.7
MGA_2023	LOCUS_20140	sequence20:31491..32024(-)	frameshift		32056	WP_002209582.1	ABC transporter permease	100.0	55.5	66.7
MGA_2024	LOCUS_20150	sequence20:32009..32452(-)	frameshift		32056	WP_002209582.1	ABC transporter permease	87.8	40.4	69.0
MGA_2058	LOCUS_20490	sequence21:11214..12194(+)	frameshift,internal_stop_codon	12192..12194(+)	12407	WP_002212254.1	ATPase RavA	100.0	63.1	75.8
MGA_2059	LOCUS_20500	sequence21:12195..12449(+)	frameshift,internal_stop_codon	12192..12194(+)	12407	WP_001315921.1	ATPase RavA	84.5	14.3	50.7
MGA_2060	LOCUS_20510	sequence21:12449..12709(+)	frameshift,internal_stop_codon	12192..12194(+)	12410	WP_011815252.1	ATPase RavA	97.7	16.7	56.0
MGA_2061	LOCUS_20520	sequence21:12716..13816(+)	frameshift		13699	WP_000956643.1	ATPase RavA stimulator ViaA	96.4	72.5	50.7
MGA_2062	LOCUS_20530	sequence21:13705..14175(+)	frameshift		13699	WP_002212255.1	ATPase RavA stimulator ViaA	96.8	30.9	74.8
MGA_2067	LOCUS_20580	sequence21:18939..19256(+)	frameshift		19238	WP_002212262.1	F0F1 ATP synthase subunit I	99.0	81.9	58.7
MGA_2104	LOCUS_20950	sequence21:57014..57349(-)	partial			WP_005169553.1	RES family NAD+ phosphorylase	96.4	70.4	37.4
MGA_2107	LOCUS_20970	sequence22:295..1086(-)	frameshift		312	WP_013530374.1	site-specific integrase	98.1	61.9	65.1
MGA_2130	LOCUS_21200	sequence22:26013..26180(-)	partial			WP_000331707.1	Fe-S cluster assembly scaffold IscU	100.0	43.0	85.5
MGA_2139	LOCUS_21290	sequence22:34911..36575(+)	partial			WP_162275130.1	GDSL-type esterase/lipase family protein	47.5	56.5	29.2
MGA_2151	LOCUS_21410	sequence22:52340..52684(-)	partial			WP_003809056.1	hypothetical protein	50.9	78.9	48.3
MGA_2152	LOCUS_21420	sequence22:52799..>57930(-)	partial			WP_063921491.1	DUF5801 repeats-in-toxin domain-containing protein	58.5	23.7	27.7
MGA_2154	LOCUS_21440	sequence23:1223..1633(-)	partial			WP_005164778.1	arabinose operon transcriptional regulator AraC	63.2	27.7	94.2
MGA_2155	LOCUS_21450	sequence23:1648..2715(-)	partial			WP_002210588.1	L-arabinose ABC transporter ATP-binding protein AraG	98.9	67.1	82.9
MGA_2157	LOCUS_21470	sequence23:4188..4349(+)	frameshift,internal_stop_codon	4524..4526(+),4347..4349(+)	4523	WP_011705777.1	ribulokinase	98.1	9.2	75.0
MGA_2158	LOCUS_21480	sequence23:4377..4574(+)	frameshift,internal_stop_codon	4347..4349(+)	4526	WP_050298170.1	ribulokinase	76.9	8.8	78.0
MGA_2159	LOCUS_21490	sequence23:4541..5875(+)	frameshift,internal_stop_codon	4524..4526(+),4347..4349(+)	4523	WP_002210590.1	ribulokinase	99.3	77.8	74.1
MGA_2188	LOCUS_21780	sequence23:34803..35567(-)	partial			WP_010989146.1	TonB system transport protein TonB	52.0	54.5	50.8
MGA_2204	LOCUS_21940	sequence23:54534..54722(+)	frameshift		54680	WP_011816423.1	YchJ family protein	77.4	31.2	62.5
MGA_2219	LOCUS_22090	sequence24:11844..12173(+)	frameshift		12104	WP_005158910.1	secretion protein HlyD	80.7	26.8	61.4
MGA_2220	LOCUS_22100	sequence24:12140..12844(+)	frameshift		12104	WP_005158910.1	secretion protein HlyD	97.4	69.5	65.8
MGA_2221	LOCUS_22110	sequence24:12837..13133(+)	frameshift		13046	WP_005168099.1	ATP-binding cassette domain-containing protein	68.4	11.5	70.1
MGA_2239	LOCUS_22290	sequence24:30437..31231(+)	partial			WP_003973335.1	hypothetical protein	79.2	73.4	31.0
MGA_2257	LOCUS_22470	sequence24:49217..49588(+)	frameshift		49540	WP_002212753.1	tyrosine-type recombinase/integrase	87.8	25.7	75.9
MGA_2258	LOCUS_22480	sequence24:49585..50472(+)	frameshift		49540	WP_002212753.1	tyrosine-type recombinase/integrase	99.0	69.5	77.4
MGA_2309	LOCUS_22990	sequence25:45981..47399(+)	frameshift		47315	WP_011817326.1	glutathione-regulated potassium-efflux system protein KefB	90.7	71.1	78.0
MGA_2310	LOCUS_23000	sequence25:47305..47814(+)	frameshift		47315	WP_002212314.1	glutathione-regulated potassium-efflux system protein KefB	92.9	26.1	80.9
MGA_2323	LOCUS_23120	sequence26:120..437(+)	partial			WP_005168498.1	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	97.1	29.0	82.4
MGA_2324	LOCUS_23130	sequence26:822..1667(+)	partial			WP_004524248.1	MurR/RpiR family transcriptional regulator	76.9	70.7	31.5
MGA_2327	LOCUS_23160	sequence26:4123..4872(+)	partial			WP_014626293.1	ABC transporter permease	88.8	54.2	46.6
MGA_2337	LOCUS_23260	sequence26:16894..17088(+)	frameshift		16837	WP_013098253.1	Gfo/Idh/MocA family oxidoreductase	59.4	10.1	76.3
MGA_2353	LOCUS_23420	sequence26:33539..34090(+)	partial			WP_011705716.1	type VI secretion system baseplate subunit TssG	93.4	51.5	64.9
MGA_2354	LOCUS_23430	sequence26:34087..37197(+)	partial			WP_156019039.1	RHS repeat-associated core domain-containing protein	90.6	63.4	34.6
MGA_2369	LOCUS_23580	sequence26:50763..50960(-)	partial			WP_000059623.1	tyrosine-type recombinase/integrase	100.0	15.5	69.2
MGA_2370	LOCUS_23590	sequence26:50961..51365(+)	internal_stop_codon	51387..51389(+),51363..51365(+)		WP_011862019.1	hypothetical protein	82.8	39.1	44.1
MGA_2372	LOCUS_23610	sequence26:52429..52749(-)	partial			WP_000059623.1	tyrosine-type recombinase/integrase	94.3	23.8	70.0
MGA_2373	LOCUS_23620	sequence27:115..840(-)	partial			WP_005168498.1	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	97.1	66.5	73.1
MGA_2418	LOCUS_24070	sequence27:43078..44103(-)	partial			WP_000368710.1	undecaprenyl-phosphate galactose phosphotransferase WbaP	100.0	71.2	66.6
MGA_2430	LOCUS_24180	sequence28:7965..8174(+)	internal_stop_codon	7947..7949(+)		WP_047373140.1	GNAT family N-acetyltransferase	100.0	42.3	85.5
MGA_2431	LOCUS_24190	sequence28:8544..10415(+)	partial			WP_118839700.1	DEAD/DEAH box helicase family protein	87.6	62.1	31.2
MGA_2437	LOCUS_24250	sequence28:13704..13997(-)	frameshift,internal_stop_codon	13719..13721(-),13786..13788(-),14058..14060(-),13735..13737(-),13641..13643(-)	14048,13825,13728,13991	WP_013087110.1	IS5-like element IS903B family transposase	50.5	15.2	81.6
MGA_2438	LOCUS_24260	sequence28:14058..14276(-)	frameshift,internal_stop_codon	14057..14059(-),13785..13787(-),14309..14311(-)	13824,14353,13990,14047	WP_013096391.1	IS5-like element IS903B family transposase	100.0	22.4	83.3
MGA_2440	LOCUS_24280	sequence28:14853..15257(+)	frameshift		14743	WP_132283202.1	hypothetical protein	82.1	53.5	41.8
MGA_2443	LOCUS_24310	sequence28:18016..18231(+)	partial			WP_121576702.1	IS3 family transposase	100.0	19.2	94.4
MGA_2444	LOCUS_24320	sequence28:18185..18346(+)	partial			WP_000155898.1	zincin-like metallopeptidase domain-containing protein	81.1	13.7	67.4
MGA_2474	LOCUS_24620	sequence28:46702..46884(-)	frameshift		46919	WP_000612591.1	IS66 family insertion sequence element accessory protein TnpB	88.3	46.1	79.2
MGA_2499	LOCUS_24860	sequence29:24581..24925(+)	partial			WP_011705090.1	PTS glucose transporter subunit IIBC	78.9	18.9	52.2
MGA_2534	LOCUS_25210	sequence30:13513..14022(-)	partial			WP_011815372.1	Sec-independent protein translocase protein TatB	88.8	68.8	59.5
MGA_2544	LOCUS_25310	sequence30:23887..31263(-)	partial			WP_013533569.1	shikimate kinase	57.6	78.4	29.6
MGA_2585	LOCUS_25710	sequence31:20433..20660(+)	frameshift		20657	WP_028028074.1	nucleoside triphosphate pyrophosphatase	96.0	37.1	70.8
MGA_2586	LOCUS_25720	sequence31:20647..21018(+)	frameshift		20657	WP_005170743.1	nucleoside triphosphate pyrophosphatase	97.6	62.2	67.5
MGA_2606	LOCUS_25920	sequence31:43394..43579(+)	partial			WP_000732115.1	GhoT/OrtT family toxin	98.4	72.0	45.0
MGA_2688	LOCUS_26730	sequence34:215..991(-)	partial			WP_009893249.1	cytosine permease	92.2	55.7	36.0
MGA_2722	LOCUS_27070	sequence34:37397..37882(-)	frameshift		37896	WP_000684328.1	30S ribosomal protein S6--L-glutamate ligase	95.7	51.3	78.6
MGA_2723	LOCUS_27080	sequence34:37876..38295(-)	frameshift		37896	WP_000684361.1	30S ribosomal protein S6--L-glutamate ligase	96.4	44.7	77.6
MGA_2729	LOCUS_27140	sequence34:43891..44091(-)	partial			WP_000342247.1	ABC transporter permease	98.5	29.7	69.2
MGA_2733	LOCUS_27170	sequence35:5561..5794(-)	partial			WP_020688201.1	YnbE family lipoprotein	62.3	76.2	70.8
MGA_2735	LOCUS_27190	sequence35:8628..9446(+)	partial			WP_004187329.1	PAS domain-containing methyl-accepting chemotaxis protein	96.7	51.2	44.1
MGA_2759	LOCUS_27430	sequence35:34485..35390(-)	frameshift		35392	WP_013097757.1	flavocytochrome c	88.0	28.6	65.7
MGA_2760	LOCUS_27440	sequence35:35390..36301(-)	frameshift		35392,36290	WP_013097757.1	flavocytochrome c	99.3	34.2	67.5
MGA_2791	LOCUS_27750	sequence36:25785..29858(-)	partial			WP_169347939.1	non-ribosomal peptide synthase/polyketide synthase	78.3	16.3	34.6
MGA_2804	LOCUS_27880	sequence37:17112..17348(+)	internal_stop_codon	17106..17108(+)		WP_005302630.1	DMT family protein	94.9	62.7	66.2
MGA_2816	LOCUS_28000	sequence37:31284..32675(-)	partial			WP_003243729.1	2,6-beta-fructan 6-levanbiohydrolase	69.3	61.0	36.6
MGA_2817	LOCUS_28010	sequence37:32797..33486(+)	partial			WP_001353346.1	helix-turn-helix transcriptional regulator	59.4	59.1	55.1
MGA_2821	LOCUS_28040	sequence38:1833..2207(+)	frameshift		2138	WP_013095314.1	DMT family transporter	82.3	31.8	81.4
MGA_2822	LOCUS_28050	sequence38:2207..2788(+)	frameshift		2138	WP_001358011.1	DMT family transporter	96.9	58.6	59.0
MGA_2878	LOCUS_28600	sequence39:32675..32842(+)	partial			WP_002215949.1	ash family protein	83.6	25.6	54.3
MGA_2879	LOCUS_28610	sequence39:32839..33306(+)	partial			WP_002209923.1	primase-like DNA-binding domain-containing protein	89.0	16.9	46.1
MGA_2900	LOCUS_28820	sequence40:20875..21237(-)	partial			WP_011815644.1	YqaA family protein	54.2	45.8	76.9
MGA_2907	LOCUS_28890	sequence40:28831..29319(+)	partial			WP_197530111.1	SRPBCC family protein	86.4	55.6	41.4
MGA_2912	LOCUS_28940	sequence40:32614..32892(+)	partial			WP_011816099.1	putative adenosine monophosphate-protein transferase Fic	91.3	43.1	63.1
MGA_2943	LOCUS_29250	sequence41:28603..29217(+)	frameshift		29031	WP_015065126.1	isoaspartyl peptidase/L-asparaginase	69.1	43.3	66.7
MGA_2944	LOCUS_29260	sequence41:29214..29555(+)	frameshift		29025	WP_001030503.1	beta-aspartyl-peptidase	100.0	36.1	72.6
MGA_2945	LOCUS_29270	sequence41:29817..30113(+)	internal_stop_codon	30111..30113(+)		WP_005479800.1	LysR substrate-binding domain-containing protein	91.8	30.7	55.6
MGA_2948	LOCUS_29300	sequence41:31962..32564(+)	partial			WP_024265555.1	site-specific integrase	44.0	19.7	40.9
MGA_2951	LOCUS_29330	sequence42:2814..3221(-)	frameshift		2858	WP_011105360.1	ABC transporter ATP-binding protein	85.9	40.6	64.7
MGA_2977	LOCUS_29590	sequence42:30165..30521(-)	frameshift		30564	WP_015369282.1	phenolic acid decarboxylase	99.2	70.1	84.6
MGA_2978	LOCUS_29600	sequence42:30544..30663(-)	frameshift		30564	WP_015369282.1	phenolic acid decarboxylase	84.6	19.8	84.8
MGA_2988	LOCUS_29690	sequence43:8967..10073(-)	internal_stop_codon	10095..10097(-)		WP_013098388.1	type I secretion system permease/ATPase	100.0	51.0	72.0
MGA_2989	LOCUS_29700	sequence43:10095..11147(-)	internal_stop_codon	10095..10097(-)		WP_013098388.1	type I secretion system permease/ATPase	98.6	47.7	60.3
MGA_2991	LOCUS_29720	sequence43:12638..12922(-)	frameshift		13013	WP_001237656.1	Ig-like domain repeat protein	95.7	2.5	53.3
MGA_2992	LOCUS_29730	sequence43:12999..14450(-)	frameshift		13012,14455	WP_013098386.1	Ig-like domain-containing protein	97.1	13.3	51.4
MGA_2993	LOCUS_29740	sequence43:14444..15310(-)	frameshift		15458,15479,15476,14455,15467	WP_013098386.1	Ig-like domain-containing protein	98.3	8.0	55.1
MGA_2994	LOCUS_29750	sequence43:15321..17069(-)	partial			WP_003147473.1	Ig-like domain-containing protein	90.2	21.1	37.3
MGA_3004	LOCUS_29850	sequence43:29044..29952(-)	partial			WP_015064418.1	LysR family transcriptional regulator	64.9	63.6	29.4
MGA_3005	LOCUS_29860	sequence44:69..860(-)	partial			WP_011815743.1	integrase domain-containing protein	89.7	57.7	90.7
MGA_3036	LOCUS_30160	sequence45:1245..1979(-)	frameshift		2079	WP_002209313.1	integrase arm-type DNA-binding domain-containing protein	98.8	57.5	78.8
MGA_3037	LOCUS_30170	sequence45:2071..2274(-)	frameshift,internal_stop_codon	2293..2295(-)	2079	WP_001218324.1	integrase arm-type DNA-binding domain-containing protein	97.0	16.1	68.2
MGA_3038	LOCUS_30180	sequence45:2293..2493(-)	frameshift,internal_stop_codon	2293..2295(-)	2079	WP_032666220.1	integrase arm-type DNA-binding domain-containing protein	98.5	15.4	76.9
MGA_3046	LOCUS_30260	sequence45:10783..15870(-)	partial			WP_044287952.1	hypothetical protein	20.1	18.4	33.5
MGA_3049	LOCUS_30290	sequence45:19062..19265(+)	frameshift		19256	WP_000636379.1	transposase	73.1	36.0	63.3
MGA_3050	LOCUS_30300	sequence45:19292..19468(+)	frameshift		19256	WP_088895425.1	IS3-like element IS2 family transposase	87.9	12.5	70.6
MGA_3051	LOCUS_30310	sequence45:19720..19980(+)	internal_stop_codon	19558..19560(+),19978..19980(+)		WP_009937387.1	class I SAM-dependent methyltransferase	97.7	32.8	51.2
MGA_3053	LOCUS_30330	sequence45:22232..22681(-)	partial			WP_088591610.1	STY4528 family pathogenicity island replication protein	99.3	36.2	66.2
MGA_3064	LOCUS_30440	sequence46:4988..5944(+)	partial			WP_004199873.1	helix-turn-helix domain-containing protein	41.8	41.7	29.3
MGA_3066	LOCUS_30460	sequence46:7379..8773(-)	internal_stop_codon	8795..8797(-)		WP_012066673.1	GMC family oxidoreductase N-terminal domain-containing protein	95.7	81.2	43.7
MGA_3073	LOCUS_30530	sequence46:17789..17983(-)	partial			WP_013098219.1	multidrug efflux RND transporter permease AcrD	100.0	6.2	59.4
MGA_3110	LOCUS_30890	sequence48:20498..20719(-)	partial			WP_011105120.1	coronafacic acid synthetase	89.0	36.7	43.1
MGA_3168	LOCUS_31460	sequence50:9717..10376(+)	internal_stop_codon	10374..10376(+)		WP_000531604.1	spermidine/putrescine ABC transporter ATP-binding protein PotA	99.5	57.7	78.4
MGA_3169	LOCUS_31470	sequence50:10467..10832(+)	internal_stop_codon	10374..10376(+)		WP_013097089.1	spermidine/putrescine ABC transporter ATP-binding protein PotA	98.3	32.0	75.6
MGA_3172	LOCUS_31500	sequence50:12591..12971(+)	frameshift		12950,12607	WP_015705058.1	spermidine/putrescine ABC transporter substrate-binding protein PotD	92.1	33.3	83.6
MGA_3173	LOCUS_31510	sequence50:12968..13603(+)	frameshift		12953	WP_000759310.1	spermidine/putrescine ABC transporter substrate-binding protein PotD	100.0	60.6	78.7
MGA_3179	LOCUS_31570	sequence50:21385..21888(+)	frameshift		21837	WP_015705938.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	90.4	31.7	68.9
MGA_3180	LOCUS_31580	sequence50:21855..22835(+)	frameshift		21837	WP_001302304.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	97.2	66.0	65.9
MGA_3184	LOCUS_31620	sequence50:24231..24671(-)	frameshift		24236	WP_015040606.1	Ldh family oxidoreductase	89.7	39.0	42.0
MGA_3187	LOCUS_31650	sequence51:88..339(-)	partial			WP_011861179.1	PTS transporter subunit EIIC	86.7	13.9	46.6
MGA_3196	LOCUS_31740	sequence51:9245..9460(+)	partial			WP_002209443.1	sugar-binding transcriptional regulator	57.7	13.1	90.2
MGA_3210	LOCUS_31880	sequence52:108..353(-)	partial			WP_005174192.1	tagaturonate reductase	95.1	15.9	83.1
MGA_3214	LOCUS_31920	sequence52:4080..4526(+)	partial			WP_002210415.1	EnvZ/OmpR regulon moderator MzrA	59.5	69.8	47.8
MGA_3238	LOCUS_32160	sequence53:3328..4041(-)	frameshift		4015	WP_005173037.1	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	95.8	56.9	83.3
MGA_3239	LOCUS_32170	sequence53:3986..4555(-)	frameshift		4042	WP_005173037.1	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	95.2	45.1	82.8
MGA_3259	LOCUS_32370	sequence53:22973..23335(+)	frameshift		23329	WP_002209806.1	Hcp family type VI secretion system effector	100.0	75.5	48.3
MGA_3266	LOCUS_32440	sequence54:7793..8095(+)	frameshift		7836	WP_005168189.1	glutamine ABC transporter permease GlnP	87.0	39.9	88.5
MGA_3272	LOCUS_32500	sequence54:14628..14957(-)	frameshift		14684,14717	WP_011963899.1	isopentenyl-diphosphate Delta-isomerase	68.8	42.9	56.0
MGA_3276	LOCUS_32540	sequence54:19637..20011(-)	partial			WP_011460688.1	FMN-binding protein	78.2	67.6	40.8
MGA_3306	LOCUS_32830	sequence56:8154..9146(-)	partial			WP_010938366.1	BMP family ABC transporter substrate-binding protein	86.1	73.8	27.4
MGA_3314	LOCUS_32910	sequence56:15738..16907(+)	partial			WP_002209560.1	biofilm formation regulator HmsP	96.7	58.4	43.8
MGA_3320	LOCUS_32970	sequence56:21773..21931(+)	partial			WP_002213866.1	SymE family type I addiction module toxin	98.1	68.9	64.7
MGA_3322	LOCUS_32990	sequence57:60..680(-)	partial			WP_010877290.1	alanine--tRNA ligase	77.2	17.1	29.2
MGA_3323	LOCUS_33000	sequence57:936..1631(-)	internal_stop_codon	936..938(-)		WP_000491136.1	L-lysine exporter LysO	97.8	73.2	26.4
MGA_3325	LOCUS_33020	sequence57:2828..3796(-)	partial			WP_003100955.1	pyridoxal-phosphate dependent enzyme	94.4	67.2	40.9
MGA_3329	LOCUS_33060	sequence57:6527..7306(-)	partial			WP_010931011.1	metal-dependent hydrolase	92.3	68.9	58.2
MGA_3331	LOCUS_33080	sequence57:14266..14742(-)	frameshift		14336,14753	WP_001118645.1	IS5 family transposase	85.4	44.0	74.1
MGA_3334	LOCUS_33110	sequence57:16314..16682(-)	partial			WP_010926674.1	aldo/keto reductase	91.0	37.6	63.1
MGA_3335	LOCUS_33120	sequence57:16755..17426(-)	partial			WP_033448174.1	metal-dependent hydrolase	91.0	58.4	53.7
MGA_3341	LOCUS_33160	sequence58:105..578(-)	partial			WP_000342247.1	ABC transporter permease	97.5	69.9	78.4
MGA_3378	LOCUS_33520	sequence60:2584..3777(+)	partial			WP_011028856.1	beta-ketoacyl synthase N-terminal-like domain-containing protein	61.2	61.8	32.7
MGA_3392	LOCUS_33660	sequence60:15925..16170(-)	internal_stop_codon	15925..15927(-)		WP_122974027.1	IS3 family transposase	96.3	17.3	79.5
MGA_3410	LOCUS_33840	sequence61:16522..17265(-)	partial			WP_015706015.1	shikimate transporter	99.2	55.6	71.8
MGA_3411	LOCUS_33850	sequence62:209..1036(+)	partial			WP_000214431.1	ATP-binding protein	97.8	42.0	38.7
MGA_3417	LOCUS_33910	sequence62:4639..5391(-)	partial			WP_226858412.1	LuxR family transcriptional regulator	98.8	74.6	65.9
MGA_3422	LOCUS_33960	sequence62:9132..9593(+)	frameshift		9518	WP_015039736.1	P-type conjugative transfer protein TrbJ	66.7	39.1	64.7
MGA_3423	LOCUS_33970	sequence62:9544..9978(+)	frameshift		9518	WP_015039736.1	P-type conjugative transfer protein TrbJ	98.6	54.4	65.5
MGA_3425	LOCUS_33990	sequence62:10218..11444(+)	partial			WP_015039738.1	P-type conjugative transfer protein TrbL	66.7	51.3	65.4
MGA_3428	LOCUS_34020	sequence62:12113..12412(-)	partial			WP_010378959.1	XRE family transcriptional regulator	81.8	64.8	46.9
MGA_3436	LOCUS_34100	sequence62:15148..16503(+)	internal_stop_codon	15145..15147(+)		WP_000350638.1	AAA family ATPase	99.6	63.2	40.4
MGA_3450	LOCUS_34220	sequence64:143..367(+)	frameshift		358	WP_154235330.1	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	97.3	20.1	73.6
MGA_3451	LOCUS_34230	sequence64:382..591(+)	frameshift		358	WP_154235330.1	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	66.7	12.8	84.8
MGA_3454	LOCUS_34260	sequence64:1669..2022(-)	partial			WP_005809520.1	FAD-binding protein	97.4	17.0	40.7
MGA_3485	LOCUS_34560	sequence66:12109..12885(+)	partial			WP_015064676.1	ATP-binding cassette domain-containing protein	87.2	70.3	47.1
MGA_3495	LOCUS_34660	sequence67:12942..13316(+)	partial			WP_000378590.1	shikimate transporter	98.4	28.1	83.7
MGA_3499	LOCUS_34700	sequence68:2872..3432(+)	internal_stop_codon	3430..3432(+)		WP_013098428.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	100.0	47.2	68.8
MGA_3500	LOCUS_34710	sequence68:3436..4050(+)	internal_stop_codon	3430..3432(+)		WP_002208745.1	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	99.5	52.1	75.4
MGA_3501	LOCUS_34720	sequence68:4068..4277(+)	frameshift		4274	WP_011816951.1	multidrug efflux MFS transporter permease subunit EmrB	100.0	13.5	87.0
MGA_3502	LOCUS_34730	sequence68:4370..5599(+)	frameshift		4274	WP_001296316.1	multidrug efflux MFS transporter permease subunit EmrB	100.0	79.9	82.9
MGA_3508	LOCUS_34790	sequence69:115..420(-)	frameshift		439	WP_000212822.1	phage tail tape measure protein	94.1	9.4	44.1
MGA_3509	LOCUS_34800	sequence69:398..2995(-)	frameshift		439	WP_000212822.1	phage tail tape measure protein	98.4	78.0	45.0
MGA_3511	LOCUS_34820	sequence69:3788..4660(+)	partial			WP_000211990.1	ORF6N domain-containing protein	48.6	63.7	62.0
MGA_3514	LOCUS_34850	sequence69:5364..5819(-)	partial			WP_001275507.1	major tail subunit	96.7	61.3	73.3
MGA_3523	LOCUS_34940	sequence69:11041..11553(-)	partial			WP_165443313.1	terminase large subunit	84.7	24.8	66.7
MGA_3537	LOCUS_35070	sequence71:226..849(+)	partial			WP_011267847.1	alpha/beta fold hydrolase	98.6	57.3	63.7
MGA_3539	LOCUS_35090	sequence71:1349..2422(+)	frameshift,internal_stop_codon	1340..1342(+)	2410	WP_011205290.1	methyl-accepting chemotaxis protein	98.9	52.6	46.6
MGA_3555	LOCUS_35250	sequence72:9259..9639(+)	partial			WP_013087117.1	DUF305 domain-containing protein	67.5	69.7	63.5
MGA_3556	LOCUS_35260	sequence73:459..1094(+)	partial			WP_002209547.1	cyclic-guanylate-specific phosphodiesterase	99.1	74.4	46.4
MGA_3557	LOCUS_35270	sequence73:1876..3390(+)	partial			WP_011974776.1	EAL domain-containing protein	75.2	48.2	40.0
MGA_3563	LOCUS_35320	sequence74:1858..2298(+)	partial			WP_085304998.1	retron St85 family RNA-directed DNA polymerase	100.0	46.7	47.6
MGA_3564	LOCUS_35330	sequence74:2434..3813(-)	partial			WP_195816456.1	relaxase/mobilization nuclease domain-containing protein	56.6	64.6	35.1
MGA_3572	LOCUS_35410	sequence75:229..672(-)	partial			WP_012546645.1	DNA methyltransferase	72.8	24.9	35.4
MGA_3578	LOCUS_35470	sequence75:6275..7474(-)	partial			WP_005763919.1	type III secretion system effector HopM1	94.2	54.9	30.3
MGA_3581	LOCUS_35490	sequence76:1227..1916(-)	frameshift		1927	WP_002212079.1	bifunctional isocitrate dehydrogenase kinase/phosphatase	95.6	38.1	84.9
MGA_3582	LOCUS_35500	sequence76:1916..3004(-)	frameshift		1927	WP_005174579.1	bifunctional isocitrate dehydrogenase kinase/phosphatase	96.4	60.7	75.1
MGA_3583	LOCUS_35510	sequence76:3094..3300(-)	frameshift		3344,3158	WP_000857886.1	isocitrate lyase	72.1	11.3	95.9
MGA_3584	LOCUS_35520	sequence76:3201..4337(-)	frameshift		3344,3158	WP_000857856.1	isocitrate lyase	87.8	76.5	82.8
MGA_3585	LOCUS_35530	sequence76:4370..4528(-)	internal_stop_codon	4529..4531(-)		WP_013095022.1	malate synthase A	98.1	9.6	82.4
MGA_3591	LOCUS_35570	sequence77:1295..1822(-)	frameshift		1893	WP_002212046.1	SAM-dependent methyltransferase TehB	93.7	55.6	70.7
MGA_3592	LOCUS_35580	sequence77:1852..2163(-)	frameshift		1893	WP_002212046.1	SAM-dependent methyltransferase TehB	94.2	32.9	54.6
MGA_3596	LOCUS_35610	sequence78:1..809(+)	partial			WP_174847485.1	tyrosine-type recombinase/integrase	84.3	66.9	71.7
MGA_3605	LOCUS_35680	sequence80:637..1116(-)	frameshift		1169	WP_145933944.1	IS3 family transposase	100.0	43.0	81.1
MGA_3606	LOCUS_35690	sequence80:1140..1406(-)	partial			WP_000059623.1	tyrosine-type recombinase/integrase	87.5	18.1	67.5
MGA_3607	LOCUS_35700	sequence80:2023..2298(+)	partial			WP_010432103.1	nitrogen assimilation transcriptional regulator NAC	98.9	29.5	80.0
MGA_3616	LOCUS_35780	sequence82:176..424(-)	partial			WP_013096686.1	CsbD family protein	64.6	58.9	52.8
MGA_3619	LOCUS_35810	sequence83:926..1786(-)	partial			WP_015704253.1	diguanylate cyclase	98.6	61.2	43.3
MGA_3628	LOCUS_35900	sequence85:1257..1502(-)	partial			WP_028008831.1	integrase core domain-containing protein	100.0	73.0	60.5
MGA_3632	LOCUS_35930	sequence86:530..1006(-)	partial			WP_002210945.1	C40 family peptidase	99.4	55.5	76.4
MGA_3638	LOCUS_35970	sequence87:2342..2761(+)	partial			WP_000420980.1	ISAs1-like element ISEc1 family transposase	89.9	33.6	36.2
MGA_3641	LOCUS_35980	sequence88:204..566(+)	partial			WP_000954536.1	integrase arm-type DNA-binding domain-containing protein	95.0	27.7	70.7
MGA_3645	LOCUS_36020	sequence89:1161..1565(-)	partial			WP_015703733.1	LysR family transcriptional regulator	95.5	44.8	55.5
MGA_3647	LOCUS_36030	sequence90:433..1458(+)	frameshift		385	WP_086016636.1	IS3 family transposase	98.2	66.5	68.4