{ "type": "genome", "identifier": "GCF_003350475.1", "organism": "Pseudacidovorax intermedius", "title": "Pseudacidovorax intermedius", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003350475.1", "bioproject": "PRJNA224116", "biosample": "SAMN09074867", "wgs_master": "QQAV00000000.1", "refseq_category": "reference genome", "taxid": "433924", "species_taxid": "433924", "organism_name": "Pseudacidovorax intermedius", "infraspecific_name": "strain=DSM 21352", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/07/31", "asm_name": "ASM335047v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003350475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/350/475/GCF_003350475.1_ASM335047v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5975233", "genome_size_ungapped": "5974239", "gc_percent": "69.500000", "replicon_count": "0", "scaffold_count": "29", "contig_count": "29", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003350475.1-RS_2024_04_27", "annotation_date": "2024-04-27", "total_gene_count": "5513", "protein_coding_gene_count": "5425", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-07-31", "dateModified": "2018-07-31", "datePublished": "2018-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudacidovorax intermedius" ], "sample_taxid": [ "433924" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Variovorax beijingensis", "strain": "strain=502", "accession": "GCA_003951285.1", "taxid": 2496117, "species_taxid": 2496117, "relation_to_type": "type", "validated": true, "ani": 81.9948, "matched_fragments": 1084, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Variovorax gossypii", "strain": "strain=DSM 100435", "accession": "GCA_003965815.1", "taxid": 1679495, "species_taxid": 1679495, "relation_to_type": "type", "validated": true, "ani": 81.945, "matched_fragments": 959, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudorhodoferax aquiterrae", "strain": "strain=KCTC 23314", "accession": "GCA_014652235.1", "taxid": 747304, "species_taxid": 747304, "relation_to_type": "type", "validated": true, "ani": 81.3486, "matched_fragments": 1039, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter tataouinensis", "strain": "strain=TTB310", "accession": "GCA_000215705.1", "taxid": 94132, "species_taxid": 94132, "relation_to_type": "type", "validated": true, "ani": 81.207, "matched_fragments": 741, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter aquaticus", "strain": "strain=LMG 30558", "accession": "GCA_015159745.1", "taxid": 2780094, "species_taxid": 2780094, "relation_to_type": "type", "validated": true, "ani": 80.9085, "matched_fragments": 712, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax anthurii", "strain": "strain=CFPB 3232", "accession": "GCA_003269065.1", "taxid": 78229, "species_taxid": 78229, "relation_to_type": "type", "validated": true, "ani": 80.6246, "matched_fragments": 793, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga crocea", "strain": 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