{ "type": "genome", "identifier": "GCF_003350505.1", "organism": "Falsibacillus pallidus", "title": "Falsibacillus pallidus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003350505.1", "bioproject": "PRJNA224116", "biosample": "SAMN09074767", "wgs_master": "QQAY00000000.1", "refseq_category": "reference genome", "taxid": "493781", "species_taxid": "493781", "organism_name": "Falsibacillus pallidus", "infraspecific_name": "strain=DSM 25281", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/07/31", "asm_name": "ASM335050v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003350505.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/350/505/GCF_003350505.1_ASM335050v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3865655", "genome_size_ungapped": "3865367", "gc_percent": "42.000000", "replicon_count": "0", "scaffold_count": "40", "contig_count": "40", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003350505.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "4008", "protein_coding_gene_count": "3883", "non_coding_gene_count": "94", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-07-31", "dateModified": "2018-07-31", "datePublished": "2018-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Falsibacillus pallidus" ], "sample_taxid": [ "493781" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.099 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3865655", "Number of Sequences": "40", "Longest Sequences (bp)": "685725", "N50 (bp)": "267891", "Gap Ratio (%)": "0.007450", "GCcontent (%)": "42.2", "Number of CDSs": "3964", "Average Protein Length": "280.6", "Coding Ratio (%)": "86.3", "Number of rRNAs": "3", "Number of tRNAs": "73", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Falsibacillus pallidus", "strain": "strain=DSM 25281", "accession": "GCA_003350505.1", "taxid": 493781, "species_taxid": 493781, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1265, "total_fragments": 1268, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Falsibacillus albus", "strain": "strain=GY 10110", "accession": "GCA_003668575.1", "taxid": 2478915, "species_taxid": 2478915, "relation_to_type": "type", "validated": true, "ani": 78.5975, "matched_fragments": 371, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus enclensis", "strain": "strain=SGD-1123", "accession": "GCA_001456935.1", "taxid": 1402860, "species_taxid": 1402860, "relation_to_type": "type", "validated": true, "ani": 77.5166, "matched_fragments": 141, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus enclensis", "strain": "strain=SGD-1123", "accession": "GCA_900094975.1", "taxid": 1402860, "species_taxid": 1402860, "relation_to_type": "type", "validated": true, "ani": 77.5117, "matched_fragments": 142, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { 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