{
    "type": "genome",
    "identifier": "GCF_003352835.1",
    "organism": "Ornithinimicrobium murale",
    "title": "Ornithinimicrobium murale",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Sun Yat-sen University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003352835.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN09464003",
        "wgs_master": "QLVD00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1050153",
        "species_taxid": "1050153",
        "organism_name": "Ornithinimicrobium murale",
        "infraspecific_name": "strain=DSM 22056",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/08/01",
        "asm_name": "ASM335283v1",
        "asm_submitter": "Sun Yat-sen University",
        "gbrs_paired_asm": "GCA_003352835.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/352/835/GCF_003352835.1_ASM335283v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3285756",
        "genome_size_ungapped": "3285756",
        "gc_percent": "69.000000",
        "replicon_count": "0",
        "scaffold_count": "33",
        "contig_count": "33",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003352835.1-RS_2024_03_21",
        "annotation_date": "2024-03-21",
        "total_gene_count": "3088",
        "protein_coding_gene_count": "2981",
        "non_coding_gene_count": "69",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-08-01",
    "dateModified": "2018-08-01",
    "datePublished": "2018-08-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Ornithinimicrobium murale"
        ],
        "sample_taxid": [
            "1050153"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany"
        ],
        "sample_host_location_id": [],
        "data_size": "0.895 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 45.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3285756",
        "Number of Sequences": "33",
        "Longest Sequences (bp)": "514099",
        "N50 (bp)": "201890",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.2",
        "Number of CDSs": "3079",
        "Average Protein Length": "321.6",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "66",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Ornithinimicrobium murale",
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                "validated": true,
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                "matched_fragments": 1077,
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                "status": "conclusive"
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            {
                "organism_name": "Ornithinimicrobium cavernae",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
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            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Ornithinicoccus hortensis",
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                "relation_to_type": "type",
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                "ani": 79.842,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serinicoccus hydrothermalis",
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                "accession": "GCA_001685415.1",
                "taxid": 1758689,
                "species_taxid": 1758689,
                "relation_to_type": "type",
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                "ani": 79.1569,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serinicoccus profundi",
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                "accession": "GCA_008001015.1",
                "taxid": 1078471,
                "species_taxid": 1078471,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0262,
                "matched_fragments": 328,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ornithinimicrobium kibberense",
                "strain": "strain=DSM 17687",
                "accession": "GCA_006519705.1",
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                "relation_to_type": "type",
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                "ani": 79.0055,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ornithinimicrobium sediminis",
                "strain": "strain=EGI L100131",
                "accession": "GCA_021272345.1",
                "taxid": 2904603,
                "species_taxid": 2904603,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9983,
                "matched_fragments": 365,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serinicoccus marinus",
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                "accession": "GCA_008386315.1",
                "taxid": 247333,
                "species_taxid": 247333,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8075,
                "matched_fragments": 327,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arsenicicoccus piscis",
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                "accession": "GCA_022568835.1",
                "taxid": 673954,
                "species_taxid": 673954,
                "relation_to_type": "type",
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                "total_fragments": 1078,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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        "gtdb_result": [
            {
                "accession": "GCF_003352835.1",
                "gtdb_species": "s__Ornithinicoccus muralis",
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                "matched_fragments": 1077,
                "total_fragments": 1078,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Dermatophilaceae;g__Ornithinicoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_003121625.1",
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                "matched_fragments": 642,
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
                "accession": "GCF_007197575.1",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_012515595.1",
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            {
                "accession": "GCF_000421185.1",
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            },
            {
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                "ani": 79.1902,
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": 0.0,
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    "_genome_taxon": [
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        "murale"
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    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}