{ "type": "genome", "identifier": "GCF_003363015.1", "organism": "Enterobacillus tribolii", "title": "Enterobacillus tribolii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003363015.1", "bioproject": "PRJNA224116", "biosample": "SAMN08776296", "wgs_master": "QRAP00000000.1", "refseq_category": "reference genome", "taxid": "1487935", "species_taxid": "1487935", "organism_name": "Enterobacillus tribolii", "infraspecific_name": "strain=DSM 103736", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/02", "asm_name": "ASM336301v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003363015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/363/015/GCF_003363015.1_ASM336301v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4931017", "genome_size_ungapped": "4929967", "gc_percent": "56.000000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003363015.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "4365", "protein_coding_gene_count": "4220", "non_coding_gene_count": "86", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-02", "dateModified": "2018-08-02", "datePublished": "2018-08-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterobacillus tribolii" ], "sample_taxid": [ "1487935" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.391 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 98.96, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4931017", "Number of Sequences": "39", "Longest Sequences (bp)": "1060498", "N50 (bp)": "428000", "Gap Ratio (%)": "0.021294", "GCcontent (%)": "56.0", "Number of CDSs": "4260", "Average Protein Length": "328.8", "Coding Ratio (%)": "85.2", "Number of rRNAs": "6", "Number of tRNAs": "76", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Enterobacillus tribolii", "strain": "strain=DSM 103736", "accession": "GCA_003363015.1", "taxid": 1487935, "species_taxid": 1487935, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1621, "total_fragments": 1623, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterobacillus tribolii", "strain": "strain=IG-V01", "accession": "GCA_019739135.1", "taxid": 1487935, "species_taxid": 1487935, "relation_to_type": "type", "validated": true, "ani": 99.9945, "matched_fragments": 1612, "total_fragments": 1623, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Serratia nevei", "strain": "strain=S15", "accession": "GCA_008364245.1", "taxid": 2703794, "species_taxid": 2703794, "relation_to_type": "type", "validated": true, "ani": 80.0014, "matched_fragments": 655, "total_fragments": 1623, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Serratia ficaria", "strain": "strain=NCTC12148", "accession": "GCA_900187015.1", "taxid": 61651, "species_taxid": 61651, "relation_to_type": "type", "validated": true, "ani": 79.9573, "matched_fragments": 674, "total_fragments": 1623, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Serratia ficaria", "strain": "strain=NBRC 102596", "accession": "GCA_001590885.1", "taxid": 61651, "species_taxid": 61651, "relation_to_type": "type", "validated": true, "ani": 79.9179, "matched_fragments": 663, "total_fragments": 1623, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Serratia marcescens", "strain": "strain=ATCC 13880 substr. 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