# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_24	LOCUS_00240	sequence1:28727..29605(-)	frameshift		29604	WP_085976170.1	IS3 family transposase	99.7	74.9	73.2
MGA_28	LOCUS_00280	sequence1:31229..32464(-)	partial			WP_003899159.1	hypothetical protein	56.7	68.7	54.3
MGA_44	LOCUS_00440	sequence1:45667..46920(+)	frameshift		45437	WP_015287743.1	DUF4226 domain-containing protein	88.5	79.4	50.5
MGA_79	LOCUS_00790	sequence1:79428..80177(+)	frameshift		79371	WP_131337810.1	LuxR family transcriptional regulator	87.1	23.5	45.2
MGA_87	LOCUS_00870	sequence1:89516..92686(+)	partial			WP_139131626.1	beta-ketoacyl synthase N-terminal-like domain-containing protein	85.6	63.7	44.0
MGA_88	LOCUS_00880	sequence1:92683..107553(+)	frameshift		92524	WP_005112588.1	non-ribosomal peptide synthetase	94.9	57.2	54.5
MGA_92	LOCUS_00920	sequence1:110984..115684(+)	partial			WP_041180293.1	type I polyketide synthase	70.7	52.4	62.2
MGA_95	LOCUS_00950	sequence1:123435..124811(+)	partial			WP_012257994.1	AMP-binding protein	36.2	36.0	29.6
MGA_101	LOCUS_01010	sequence1:131275..132249(-)	partial			WP_010886125.1	PE domain-containing protein	74.4	30.2	26.3
MGA_107	LOCUS_01070	sequence1:135982..137154(+)	partial			WP_041272317.1	nitroreductase family protein	56.4	74.2	24.2
MGA_108	LOCUS_01080	sequence1:137287..138675(+)	partial			WP_004191694.1	ATP-dependent zinc metalloprotease FtsH	49.6	36.6	32.9
MGA_125	LOCUS_01250	sequence1:158329..159783(-)	partial			WP_011728237.1	amidohydrolase family protein	65.9	77.4	39.4
MGA_170	LOCUS_01700	sequence1:207201..209753(+)	partial			WP_010950597.1	PE family protein	14.8	19.1	49.2
MGA_182	LOCUS_01820	sequence1:218731..220791(+)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	48.1	44.6	51.2
MGA_194	LOCUS_01940	sequence1:235693..237063(-)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	44.3	52.5	36.6
MGA_201	LOCUS_02010	sequence1:244197..244406(-)	partial			WP_003400629.1	hypothetical protein	91.3	48.8	58.7
MGA_212	LOCUS_02120	sequence1:253260..254483(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	37.8	38.6	33.3
MGA_216	LOCUS_02160	sequence1:258193..258666(+)	partial			WP_003400664.1	SRPBCC family protein	98.7	69.2	82.6
MGA_218	LOCUS_02180	sequence1:259293..260303(-)	partial			WP_126863657.1	LLM class flavin-dependent oxidoreductase	63.1	57.1	32.1
MGA_225	LOCUS_02250	sequence1:266508..268223(+)	partial			WP_011140563.1	hypothetical protein	43.1	83.1	33.5
MGA_268	LOCUS_02680	sequence1:317864..319537(+)	partial			WP_010886066.1	PE family protein	24.1	27.0	62.7
MGA_313	LOCUS_03130	sequence1:370610..370822(-)	partial			WP_003977449.1	TOBE domain-containing protein	92.9	45.3	47.7
MGA_324	LOCUS_03240	sequence1:379664..380302(+)	frameshift		379629	WP_003400961.1	TetR/AcrR family transcriptional regulator	98.6	74.6	70.3
MGA_333	LOCUS_03330	sequence1:390835..392583(-)	partial			WP_003901256.1	PPE family protein	77.8	67.3	50.1
MGA_384	LOCUS_03840	sequence1:443372..444187(+)	partial			WP_045843938.1	hypothetical protein	60.9	73.3	77.0
MGA_394	LOCUS_03940	sequence1:454927..458331(-)	partial			WP_009939865.1	PE family protein	10.2	21.8	53.4
MGA_399	LOCUS_03990	sequence1:462247..463200(+)	frameshift,internal_stop_codon	462288..462290(+)	462169,462314	WP_003916225.1	L,D-transpeptidase LdtMt4	79.5	68.9	88.1
MGA_418	LOCUS_04180	sequence1:488665..489066(-)	partial			WP_013228395.1	CD225/dispanin family protein	49.6	53.5	46.4
MGA_432	LOCUS_04320	sequence1:504775..509388(+)	partial			WP_027084589.1	non-ribosomal peptide synthetase	41.9	19.5	33.8
MGA_442	LOCUS_04420	sequence1:519232..521259(-)	partial			WP_010950597.1	PE family protein	19.6	21.6	48.9
MGA_444	LOCUS_04440	sequence1:522137..523657(-)	partial			WP_003911027.1	PE family protein	23.3	26.9	58.5
MGA_450	LOCUS_04500	sequence1:530935..533409(+)	partial			WP_010886090.1	PE family protein	15.0	14.1	59.7
MGA_520	LOCUS_05200	sequence1:612850..614286(+)	partial			WP_011727115.1	hypothetical protein	68.2	59.4	38.1
MGA_530	LOCUS_05300	sequence1:623501..625108(+)	partial			WP_003911027.1	PE family protein	18.9	23.0	57.4
MGA_539	LOCUS_05390	sequence1:635485..636486(+)	partial			WP_012804460.1	ROK family protein	61.0	63.2	30.2
MGA_540	LOCUS_05400	sequence1:636483..637592(+)	partial			WP_013223306.1	glucose 1-dehydrogenase	19.2	21.7	38.2
MGA_550	LOCUS_05500	sequence1:646335..646751(+)	partial			WP_012640167.1	DUF1330 domain-containing protein	88.4	74.2	34.7
MGA_554	LOCUS_05540	sequence1:649118..650680(+)	frameshift,internal_stop_codon	649266..649268(+)	649003,649093,649111	WP_011727115.1	hypothetical protein	61.0	61.2	40.0
MGA_555	LOCUS_05550	sequence1:650836..652350(+)	frameshift		652481,652499,652309,652391,652267	WP_011727115.1	hypothetical protein	65.3	59.4	43.8
MGA_560	LOCUS_05600	sequence1:655920..657353(-)	partial			WP_003911027.1	PE family protein	24.3	26.4	53.4
MGA_561	LOCUS_05610	sequence1:657537..658967(-)	partial			WP_010886128.1	PE family protein	26.9	14.0	50.8
MGA_562	LOCUS_05620	sequence1:659359..662565(+)	partial			WP_010950544.1	PE family protein	11.4	24.8	45.9
MGA_580	LOCUS_05800	sequence1:685281..685658(-)	partial			WP_010886091.1	PE family protein	73.6	15.2	45.7
MGA_586	LOCUS_05860	sequence1:691842..699053(-)	partial			WP_122524938.1	PPE domain-containing protein	68.3	47.0	39.0
MGA_590	LOCUS_05900	sequence1:713413..716298(-)	partial			WP_010886105.1	PE family protein	18.2	25.3	41.7
MGA_628	LOCUS_06280	sequence1:753695..754027(-)	partial			WP_003900268.1	alpha/beta hydrolase	92.7	40.1	38.8
MGA_636	LOCUS_06360	sequence1:762069..763259(+)	partial			WP_015706067.1	MFS transporter	40.9	34.8	34.8
MGA_640	LOCUS_06400	sequence1:766857..768371(-)	partial			WP_011336871.1	class I SAM-dependent methyltransferase	29.6	70.8	43.6
MGA_653	LOCUS_06530	sequence1:783179..790447(+)	partial			WP_011030787.1	type I polyketide synthase	78.0	41.2	50.2
MGA_684	LOCUS_06840	sequence1:824019..827888(+)	partial			WP_164929092.1	ATP-binding protein	56.4	60.5	41.0
MGA_702	LOCUS_07020	sequence1:845620..848796(-)	partial			WP_010950597.1	PE family protein	10.8	19.1	58.0
MGA_734	LOCUS_07340	sequence1:883494..884684(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	43.9	33.9	61.5
MGA_777	LOCUS_07760	sequence1:928717..929391(+)	partial			WP_003898486.1	lysophospholipid acyltransferase family protein	100.0	62.6	91.1
MGA_780	LOCUS_07790	sequence1:930924..931835(-)	frameshift		931848	WP_003402684.1	HAD-IB family hydrolase	93.1	76.7	85.3
MGA_782	LOCUS_07810	sequence1:932159..932626(+)	partial			WP_157890372.1	(2Fe-2S)-binding protein	98.1	71.2	77.0
MGA_785	LOCUS_07840	sequence1:935821..937566(-)	partial			WP_010950544.1	PE family protein	20.8	24.6	55.4
MGA_790	LOCUS_07890	sequence1:942957..943232(+)	frameshift,internal_stop_codon	943230..943232(+)	943247	WP_003402695.1	glutaredoxin family protein	90.1	84.5	78.0
MGA_797	LOCUS_07960	sequence1:949705..969495(-)	partial			WP_147443659.1	non-ribosomal peptide synthetase	98.2	60.3	35.0
MGA_798	LOCUS_07970	sequence1:970367..970579(+)	partial			WP_003403439.1	siderophore transporter accessory protein MmpS5	98.6	48.6	49.3
MGA_799	LOCUS_07980	sequence1:970749..971780(-)	partial			WP_011727218.1	cytochrome P450	95.0	71.6	55.2
MGA_830	LOCUS_08290	sequence1:1006577..1008499(+)	partial			WP_003900169.1	hypothetical protein	65.8	74.5	57.1
MGA_842	LOCUS_08410	sequence1:1017304..1018005(-)	partial			WP_010908794.1	hypothetical protein	65.7	73.9	56.2
MGA_865	LOCUS_08640	sequence1:1044720..1047107(-)	partial			WP_003721622.1	ABC transporter permease	67.8	48.5	18.2
MGA_871	LOCUS_08700	sequence1:1053442..1053639(+)	partial			WP_003894957.1	hypothetical protein	93.8	73.5	54.1
MGA_872	LOCUS_08710	sequence1:1053656..1054096(-)	partial			WP_011729266.1	cytochrome P450	99.3	35.6	81.4
MGA_873	LOCUS_08720	sequence1:1054058..1054303(+)	frameshift		1054285,1054342	WP_011730811.1	TetR/AcrR family transcriptional regulator	70.4	27.4	64.9
MGA_874	LOCUS_08730	sequence1:1054353..1054625(+)	frameshift,internal_stop_codon	1054625..1054627(+)	1054285,1054342	WP_011730811.1	TetR/AcrR family transcriptional regulator	98.9	42.8	57.3
MGA_875	LOCUS_08740	sequence1:1054696..1055526(-)	partial			WP_003417299.1	BTAD domain-containing putative transcriptional regulator	97.5	70.3	60.2
MGA_886	LOCUS_08850	sequence1:1072054..1073076(+)	partial			WP_003900174.1	TIGR03086 family metal-binding protein	95.3	74.7	72.2
MGA_887	LOCUS_08860	sequence1:1073073..1077350(-)	partial			WP_010950415.1	PE family protein	8.3	9.0	64.4
MGA_970	LOCUS_09690	sequence1:1175689..1176252(+)	partial			WP_003403497.1	mycofactocin biosynthesis peptidyl-dipeptidase MftE	95.7	71.3	77.7
MGA_1087	LOCUS_10860	sequence1:1290430..1291476(+)	partial			WP_003418011.1	anti-sigma D factor RsdA	67.0	75.9	64.4
MGA_1114	LOCUS_11130	sequence1:1323713..1325530(-)	frameshift,internal_stop_codon	1325330..1325332(-),1324415..1324417(-),1324817..1324819(-),1324457..1324459(-)	1323715	WP_010950544.1	PE family protein	20.2	24.8	53.3
MGA_1123	LOCUS_11220	sequence1:1334403..1336850(+)	partial			WP_010974382.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	43.2	84.5	30.7
MGA_1134	LOCUS_11330	sequence1:1358726..1359154(-)	partial			WP_005084922.1	heme-binding protein	62.7	80.9	62.9
MGA_1147	LOCUS_11460	sequence1:1374053..1376698(-)	partial			WP_010886084.1	PE family protein	14.3	16.1	50.8
MGA_1149	LOCUS_11480	sequence1:1378028..1378627(-)	partial			WP_003905037.1	IS110 family transposase	97.5	34.0	82.0
MGA_1160	LOCUS_11590	sequence1:1390722..1393562(-)	partial			WP_010950524.1	PE family protein	12.5	19.6	63.6
MGA_1162	LOCUS_11610	sequence1:1395370..1396695(-)	frameshift,internal_stop_codon	1396107..1396109(-)	1395542,1395546,1395531,1395917,1395519	WP_010950524.1	PE family protein	24.5	17.9	63.9
MGA_1191	LOCUS_11900	sequence1:1431958..1433049(+)	partial			WP_003404747.1	PPE family protein	59.8	54.4	37.7
MGA_1201	LOCUS_12000	sequence1:1445498..1445809(+)	frameshift		1445495	WP_003417162.1	protein UsfY	99.0	74.5	81.4
MGA_1205	LOCUS_12040	sequence1:1448782..1458255(+)	partial			WP_011267345.1	non-ribosomal peptide synthetase	56.2	65.5	30.9
MGA_1210	LOCUS_12090	sequence1:1462189..1462500(-)	partial			WP_003900000.1	acyl-CoA carboxylase subunit epsilon	99.0	71.2	53.2
MGA_1214	LOCUS_12130	sequence1:1465654..1466337(-)	frameshift,internal_stop_codon	1466343..1466345(-)	1466393	WP_003899998.1	GtrA family protein	100.0	82.0	82.3
MGA_1218	LOCUS_12170	sequence1:1469769..1469978(+)	frameshift		1469709	WP_011731060.1	response regulator	98.6	45.9	85.3
MGA_1249	LOCUS_12480	sequence1:1504014..1505702(+)	partial			WP_010950732.1	PecA family PE domain-processing aspartic protease	60.3	68.1	47.1
MGA_1310	LOCUS_13080	sequence1:1571629..1571862(-)	partial			WP_003907005.1	hypothetical protein	74.0	84.1	58.6
MGA_1339	LOCUS_13370	sequence1:1607792..1608169(+)	partial			WP_003900651.1	hypothetical protein	87.2	74.4	55.5
MGA_1345	LOCUS_13430	sequence1:1613691..1616285(-)	partial			WP_010886133.1	PE family protein	13.7	23.7	44.9
MGA_1355	LOCUS_13530	sequence1:1624765..1626663(+)	partial			WP_010950840.1	PPE family protein	32.4	34.3	63.3
MGA_1359	LOCUS_13570	sequence1:1632641..1633879(-)	frameshift		1633937	WP_003900642.1	NADH-quinone oxidoreductase subunit L	94.9	61.8	87.2
MGA_1371	LOCUS_13690	sequence1:1645406..1646758(+)	partial			WP_003913805.1	PPE family protein	38.4	42.3	70.5
MGA_1372	LOCUS_13700	sequence1:1646940..1647836(+)	frameshift		1647566	WP_003900400.1	phospholipase C	73.8	42.2	71.8
MGA_1373	LOCUS_13710	sequence1:1647736..1648527(+)	frameshift		1647569	WP_003899285.1	phospholipase C	99.2	49.2	73.6
MGA_1396	LOCUS_13940	sequence1:1670186..1670389(+)	partial			WP_001830666.1	acetolactate synthase AlsS	70.1	8.5	48.9
MGA_1398	LOCUS_13960	sequence1:1672720..1673028(+)	partial			WP_003401485.1	type VII secretion system ESX-3 target PE5	73.5	73.5	49.3
MGA_1406	LOCUS_14040	sequence1:1680051..1681643(+)	partial			WP_005110647.1	non-ribosomal peptide synthetase	91.5	30.3	38.4
MGA_1422	LOCUS_14200	sequence1:1698474..1698788(+)	frameshift		1698734	WP_003906521.1	HNH endonuclease signature motif containing protein	80.8	18.6	58.3
MGA_1423	LOCUS_14210	sequence1:1698785..1699846(+)	frameshift		1698734	WP_003405897.1	HNH endonuclease signature motif containing protein	99.2	76.9	66.6
MGA_1429	LOCUS_14270	sequence1:1705280..1705780(+)	partial			WP_003416124.1	hypothetical protein	39.2	44.1	66.2
MGA_1450	LOCUS_14480	sequence1:1725590..1726036(+)	partial			WP_030862061.1	pyridoxamine 5'-phosphate oxidase family protein	86.5	41.7	35.7
MGA_1454	LOCUS_14520	sequence1:1729934..1730422(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	88.3	62.7	42.8
MGA_1493	LOCUS_14910	sequence1:1771956..1772108(-)	frameshift,internal_stop_codon	1772218..1772220(-)	1772136,1772124,1772118	WP_010950476.1	PE domain-containing protein	100.0	14.3	62.7
MGA_1494	LOCUS_14920	sequence1:1772218..1786296(-)	frameshift,internal_stop_codon	1785565..1785567(-)	1785408,1784331	WP_010886173.1	PE family protein	2.1	13.9	67.7
MGA_1500	LOCUS_14980	sequence1:1791862..1792551(+)	frameshift		1791709	WP_085976166.1	IS3 family transposase	98.7	59.3	44.9
MGA_1502	LOCUS_15000	sequence1:1793179..1793751(-)	partial			WP_010886090.1	PE family protein	45.8	9.9	42.5
MGA_1512	LOCUS_15100	sequence1:1806200..1806574(-)	partial			WP_003416005.1	TetR/AcrR family transcriptional regulator	92.7	56.9	61.7
MGA_1516	LOCUS_15140	sequence1:1810719..1811660(-)	partial			WP_010957831.1	Gfo/Idh/MocA family oxidoreductase	56.5	34.8	33.3
MGA_1519	LOCUS_15170	sequence1:1814999..1815322(-)	partial			WP_011015077.1	Hsp70 family protein	92.5	21.5	40.6
MGA_1523	LOCUS_15210	sequence1:1820660..1821244(+)	partial			WP_014877829.1	hypothetical protein	61.3	72.0	38.6
MGA_1532	LOCUS_15300	sequence1:1830153..1830509(-)	partial			WP_011730106.1	OB-fold domain-containing protein	77.1	16.7	41.3
MGA_1533	LOCUS_15310	sequence1:1830560..1831753(+)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.5
MGA_1549	LOCUS_15470	sequence1:1855042..1855488(-)	partial			WP_013229702.1	SRPBCC family protein	75.0	69.6	37.5
MGA_1583	LOCUS_15810	sequence1:1889414..1890391(+)	partial			WP_003114566.1	oxidoreductase	68.9	76.1	36.0
MGA_1600	LOCUS_15980	sequence1:1908028..1909677(+)	frameshift		1909629	WP_003407779.1	MMPL family transporter	96.9	55.0	73.3
MGA_1601	LOCUS_15990	sequence1:1909674..1910924(+)	frameshift		1909629	WP_003407779.1	MMPL family transporter	100.0	43.1	75.5
MGA_1629	LOCUS_16270	sequence1:1942273..1942935(+)	partial			WP_003415107.1	DNA-binding protein HupB	49.5	50.9	97.2
MGA_1663	LOCUS_16610	sequence1:1978463..1978972(+)	frameshift		1978951	WP_010907552.1	chorismate pyruvate-lyase family protein	97.0	78.1	57.3
MGA_1667	LOCUS_16650	sequence1:1988792..1988956(+)	partial			WP_011731392.1	IS481-like element ISMsm9 family transposase	100.0	16.4	77.8
MGA_1728	LOCUS_17260	sequence1:2082778..2083107(-)	internal_stop_codon	2083303..2083305(-)		WP_003414678.1	M23 family metallopeptidase	99.1	43.4	74.1
MGA_1734	LOCUS_17320	sequence1:2087448..2087930(+)	frameshift,internal_stop_codon	2087928..2087930(+)	2087945	WP_011727224.1	MPT63 family protein	81.9	36.5	42.7
MGA_1736	LOCUS_17340	sequence1:2089000..2089617(-)	frameshift		2089762	WP_003414666.1	response regulator transcription factor	90.2	73.4	58.4
MGA_1746	LOCUS_17440	sequence1:2101142..2101396(-)	partial			WP_003899522.1	DUF2631 domain-containing protein	81.0	69.2	73.6
MGA_1757	LOCUS_17550	sequence1:2113075..2113830(+)	partial			WP_003900586.1	gamma-glutamyl-gamma-aminobutyrate hydrolase	88.8	72.4	75.3
MGA_1758	LOCUS_17560	sequence1:2113888..2114856(-)	partial			WP_003899026.1	PPE family protein	66.5	51.5	35.3
MGA_1761	LOCUS_17590	sequence1:2119746..2122325(-)	partial			WP_010886133.1	PE family protein	13.9	23.7	52.1
MGA_1762	LOCUS_17600	sequence1:2122662..2125247(-)	partial			WP_010886084.1	PE family protein	15.1	17.5	49.6
MGA_1786	LOCUS_17840	sequence1:2147780..2150803(+)	partial			WP_013228023.1	non-ribosomal peptide synthetase	68.6	37.9	37.8
MGA_1803	LOCUS_18010	sequence1:2171794..2174643(+)	partial			WP_003899505.1	translation initiation factor IF-2	65.8	69.3	92.1
MGA_1811	LOCUS_18090	sequence1:2181746..2182426(-)	partial			WP_189232996.1	NAD(P)/FAD-dependent oxidoreductase	96.9	64.2	47.7
MGA_1839	LOCUS_18370	sequence1:2210433..2210870(+)	internal_stop_codon	2210343..2210345(+)		WP_003899476.1	Lrp/AsnC family transcriptional regulator	100.0	81.0	88.3
MGA_1881	LOCUS_18790	sequence1:2253184..2253831(-)	frameshift,internal_stop_codon	2253184..2253186(-)	2253108	WP_011027474.1	(2Fe-2S)-binding protein	99.1	81.8	36.0
MGA_1887	LOCUS_18850	sequence1:2259397..2261202(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.0	66.8	52.6
MGA_1915	LOCUS_19130	sequence1:2287121..2289085(-)	partial			WP_004193152.1	T2SS-translocated chitinase	47.6	68.4	38.8
MGA_1923	LOCUS_19210	sequence1:2294627..2294986(+)	partial			WP_003413930.1	dUTP diphosphatase	87.4	67.5	84.6
MGA_1940	LOCUS_19380	sequence1:2310389..2314258(-)	partial			WP_003910308.1	PE family protein	9.3	21.4	50.0
MGA_1941	LOCUS_19390	sequence1:2314959..2315366(+)	frameshift,internal_stop_codon	2315364..2315366(+)	2315426	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	21.2	88.9
MGA_1942	LOCUS_19400	sequence1:2315425..2315799(+)	frameshift,internal_stop_codon	2315364..2315366(+)	2315399	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	19.6	84.0
MGA_1962	LOCUS_19600	sequence1:2335035..2337248(-)	partial			WP_010950544.1	PE family protein	16.6	24.8	63.9
MGA_1964	LOCUS_19620	sequence1:2338731..2339162(-)	frameshift		2339167	WP_003413686.1	ACR3 family arsenite efflux transporter	90.2	25.9	84.5
MGA_1965	LOCUS_19630	sequence1:2339159..2340253(-)	frameshift		2339167	WP_010950755.1	ACR3 family arsenite efflux transporter	98.6	72.1	88.9
MGA_1977	LOCUS_19750	sequence1:2349063..2351381(+)	partial			WP_009938544.1	PE family protein	15.3	15.2	64.4
MGA_1984	LOCUS_19820	sequence1:2359269..2359949(+)	partial			WP_013225629.1	hypothetical protein	41.2	75.2	33.3
MGA_2013	LOCUS_20110	sequence1:2387356..2388066(+)	partial			WP_010886117.1	PE family protein	56.8	10.1	61.2
MGA_2022	LOCUS_20200	sequence1:2394174..2395907(-)	partial			WP_010886152.1	PE family protein	26.3	27.8	60.5
MGA_2023	LOCUS_20210	sequence1:2396128..2397768(-)	partial			WP_010886152.1	PE family protein	27.5	27.4	61.3
MGA_2026	LOCUS_20240	sequence1:2399178..2401310(-)	partial			WP_010886165.1	PE family protein	16.8	7.7	55.5
MGA_2057	LOCUS_20550	sequence1:2440892..2441998(-)	partial			WP_003899377.1	DUF2189 domain-containing protein	66.0	78.5	61.2
MGA_2092	LOCUS_20900	sequence1:2480471..2480788(+)	internal_stop_codon	2480414..2480416(+),2480309..2480311(+)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	85.7
MGA_2129	LOCUS_21270	sequence1:2521627..2522352(-)	partial			WP_010950543.1	hypothetical protein	39.8	41.1	46.9
MGA_2139	LOCUS_21370	sequence1:2534761..2536077(-)	partial			WP_010950544.1	PE family protein	33.1	29.5	51.7
MGA_2163	LOCUS_21610	sequence1:2564307..2565812(+)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	52.9	27.6	45.9
MGA_2165	LOCUS_21630	sequence1:2567759..2568856(-)	partial			WP_003407494.1	PE family protein	38.9	38.4	52.8
MGA_2187	LOCUS_21850	sequence1:2590588..2591055(-)	partial			WP_011728059.1	nitroreductase family deazaflavin-dependent oxidoreductase	69.7	66.7	48.6
MGA_2190	LOCUS_21880	sequence1:2593320..2594840(+)	partial			WP_013225439.1	HAMP domain-containing sensor histidine kinase	65.6	72.6	45.9
MGA_2191	LOCUS_21890	sequence1:2594845..2595816(-)	partial			WP_061481638.1	hypothetical protein	51.7	60.7	31.2
MGA_2202	LOCUS_22000	sequence1:2608820..2610313(+)	partial			WP_010941286.1	glycosyltransferase family 2 protein	42.7	64.9	31.3
MGA_2215	LOCUS_22130	sequence1:2624214..2624351(+)	internal_stop_codon	2624163..2624165(+)		WP_084050946.1	antibiotic biosynthesis monooxygenase	82.2	38.1	70.3
MGA_2221	LOCUS_22190	sequence1:2630450..2631250(-)	partial			WP_001977544.1	aldolase/citrate lyase family protein	66.9	64.8	27.5
MGA_2229	LOCUS_22270	sequence1:2639928..2640584(-)	partial			WP_001087865.1	class I SAM-dependent methyltransferase	77.1	72.5	38.1
MGA_2251	LOCUS_22490	sequence1:2680495..2681028(+)	partial			WP_003407722.1	signal peptidase II	81.9	71.8	95.9
MGA_2279	LOCUS_22770	sequence1:2713764..2714462(+)	partial			WP_003914321.1	DUF2567 domain-containing protein	70.3	84.5	60.7
MGA_2296	LOCUS_22940	sequence1:2729018..2731222(-)	partial			WP_010918464.1	cyanophycinase	36.5	66.7	29.5
MGA_2299	LOCUS_22970	sequence1:2736353..2737867(-)	partial			WP_011727267.1	serine/threonine-protein kinase	56.5	57.7	64.3
MGA_2307	LOCUS_23050	sequence1:2744985..2747210(+)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	44.8	71.4	73.4
MGA_2308	LOCUS_23060	sequence1:2747274..2747669(+)	partial			WP_003408004.1	TM2 domain-containing protein	76.3	68.5	86.0
MGA_2319	LOCUS_23170	sequence1:2759213..2759656(-)	partial			WP_003408030.1	HdeD family acid-resistance protein	99.3	74.9	84.2
MGA_2327	LOCUS_23250	sequence1:2769787..2770323(-)	partial			WP_010970164.1	DNA ligase D	83.7	17.3	48.0
MGA_2336	LOCUS_23340	sequence1:2781672..2783354(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	51.4	46.0	67.1
MGA_2350	LOCUS_23480	sequence1:2799332..2801281(+)	partial			WP_003420809.1	PE family protein	55.9	76.6	37.7
MGA_2351	LOCUS_23490	sequence1:2801576..2803246(+)	partial			WP_010950570.1	PE domain-containing protein	64.2	33.8	40.6
MGA_2352	LOCUS_23500	sequence1:2803504..2805348(+)	partial			WP_003420809.1	PE family protein	61.1	77.2	39.5
MGA_2387	LOCUS_23850	sequence1:2859210..2861072(-)	partial			WP_099318959.1	PE family protein	20.6	27.7	53.1
MGA_2389	LOCUS_23870	sequence1:2863783..2865696(-)	frameshift		2863793,2865149	WP_010886091.1	PE family protein	18.5	19.5	53.4
MGA_2415	LOCUS_24130	sequence1:2894992..2903409(-)	partial			WP_005112588.1	non-ribosomal peptide synthetase	93.0	32.2	50.7
MGA_2428	LOCUS_24260	sequence1:2915005..2915448(-)	partial			WP_209912946.1	IS481 family transposase	44.2	16.3	41.5
MGA_2430	LOCUS_24280	sequence1:2916600..2918543(+)	partial			WP_010886118.1	PE family protein	20.2	17.7	56.5
MGA_2435	LOCUS_24330	sequence1:2921920..2922090(-)	internal_stop_codon	2921920..2921922(-)		WP_003404002.1	transglutaminase-like domain-containing protein	91.1	21.1	76.5
MGA_2436	LOCUS_24340	sequence1:2922081..2922275(-)	internal_stop_codon	2921920..2921922(-)		WP_003404002.1	transglutaminase-like domain-containing protein	75.0	19.4	58.3
MGA_2439	LOCUS_24370	sequence1:2925061..2925759(+)	partial			WP_003900678.1	polyprenyl synthetase family protein	99.6	71.1	55.0
MGA_2441	LOCUS_24390	sequence1:2926050..2926928(-)	frameshift		2926927	WP_085976170.1	IS3 family transposase	99.7	74.9	73.2
MGA_2447	LOCUS_24450	sequence1:2932130..2932930(+)	partial			WP_011727499.1	glycosyl transferase	95.1	73.3	58.9
MGA_2460	LOCUS_24580	sequence1:2949459..2950514(-)	partial			WP_013226661.1	VWA domain-containing protein	82.6	18.8	26.6
MGA_2462	LOCUS_24600	sequence1:2952072..2953583(+)	frameshift		2953604,2953565	WP_011729139.1	MFS transporter	99.0	79.0	68.3
MGA_2467	LOCUS_24650	sequence1:2961779..2963146(+)	partial			WP_010879270.1	amino acid permease	88.1	74.6	41.5
MGA_2479	LOCUS_24770	sequence1:2978843..2985118(+)	partial			WP_003916655.1	PPE domain-containing protein	98.7	62.0	25.6
MGA_2481	LOCUS_24790	sequence1:2986201..2987442(+)	partial			WP_005114807.1	divalent metal cation transporter	81.4	60.6	35.7
MGA_2484	LOCUS_24820	sequence1:2989745..2991265(+)	partial			WP_010886116.1	PE family protein	26.1	26.9	62.9
MGA_2488	LOCUS_24860	sequence1:2995686..2996486(-)	partial			WP_011029339.1	SDR family oxidoreductase	95.9	44.1	44.6
MGA_2490	LOCUS_24880	sequence1:2998047..2998514(+)	partial			WP_005479856.1	2,4'-dihydroxyacetophenone dioxygenase family protein	57.4	54.7	36.6
MGA_2492	LOCUS_24900	sequence1:2999058..3000581(+)	partial			WP_004552892.1	MFS transporter	33.3	41.3	28.7
MGA_2506	LOCUS_25040	sequence1:3019206..3020177(+)	internal_stop_codon	3020175..3020177(+)		WP_003896236.1	amidohydrolase family protein	87.6	65.2	45.1
MGA_2507	LOCUS_25050	sequence1:3020184..3020474(+)	internal_stop_codon	3020175..3020177(+)		WP_011731350.1	amidohydrolase family protein	78.1	18.3	40.3
MGA_2521	LOCUS_25190	sequence1:3035228..3035551(-)	partial			WP_011726965.1	DUF4344 domain-containing metallopeptidase	97.2	36.5	45.2
MGA_2524	LOCUS_25220	sequence1:3037246..3037620(-)	partial			WP_003897321.1	hypothetical protein	96.8	57.6	48.8
MGA_2538	LOCUS_25360	sequence1:3046893..3048770(+)	partial			WP_010950464.1	PE family protein	20.5	21.1	63.3
MGA_2554	LOCUS_25520	sequence1:3071287..3071781(-)	internal_stop_codon	3071287..3071289(-)		WP_005081171.1	cysteine hydrolase	100.0	72.9	76.2
MGA_2587	LOCUS_25850	sequence1:3111536..3111859(-)	partial			WP_013531164.1	alpha/beta hydrolase	84.1	28.6	37.8
MGA_2592	LOCUS_25900	sequence1:3116076..3118757(-)	partial			WP_010886091.1	PE family protein	13.7	19.5	52.5
MGA_2606	LOCUS_26040	sequence1:3135135..3136700(-)	frameshift		3135140,3136332,3135098	WP_010950491.1	PE family protein	24.6	15.5	61.4
MGA_2611	LOCUS_26090	sequence1:3143470..3145134(-)	internal_stop_codon	3143470..3143472(-)		WP_010950464.1	PE family protein	21.3	19.4	53.4
MGA_2634	LOCUS_26320	sequence1:3166816..3167850(+)	partial			WP_003409337.1	adhesin Apa	53.8	56.9	80.5
MGA_2658	LOCUS_26560	sequence1:3192477..3192653(-)	partial			WP_003895017.1	(2Fe-2S)-binding protein	79.3	66.7	67.4
MGA_2664	LOCUS_26620	sequence1:3198961..3203427(+)	partial			WP_163682492.1	non-ribosomal peptide synthetase	98.2	26.7	51.5
MGA_2670	LOCUS_26680	sequence1:3207314..3207727(-)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	95.6	73.9	62.4
MGA_2688	LOCUS_26860	sequence1:3221314..3221808(+)	frameshift		3221745,3221736,3222076,3221757	WP_010950791.1	PE family protein	71.3	19.2	66.1
MGA_2697	LOCUS_26950	sequence1:3229164..3229658(-)	frameshift,internal_stop_codon	3229858..3229860(-)	3229683	WP_003905677.1	macro domain-containing protein	92.7	44.3	87.5
MGA_2708	LOCUS_27060	sequence1:3238659..3239900(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	46.0	37.8	52.3
MGA_2710	LOCUS_27080	sequence1:3240948..3241265(+)	partial			WP_003899716.1	NAD(P)/FAD-dependent oxidoreductase	96.2	18.8	67.3
MGA_2733	LOCUS_27310	sequence1:3267852..3268664(+)	frameshift		3267778,3268655	WP_141270575.1	ISL3-like element ISAar39 family transposase	93.3	56.4	54.8
MGA_2734	LOCUS_27320	sequence1:3268661..3268996(+)	frameshift		3268655	WP_011726739.1	ISL3-like element IS1096 family transposase	96.4	24.5	58.3
MGA_2735	LOCUS_27330	sequence1:3269278..3269547(+)	frameshift		3269254	WP_001299612.1	IS3 family transposase	98.9	27.4	47.7
MGA_2738	LOCUS_27360	sequence1:3271259..3272053(+)	partial			WP_085976166.1	IS3 family transposase	98.9	68.5	56.1
MGA_2739	LOCUS_27370	sequence1:3272054..3272260(+)	internal_stop_codon	3272258..3272260(+)		WP_167470730.1	integrase core domain-containing protein	75.0	51.0	55.8
MGA_2740	LOCUS_27380	sequence1:3272353..3273231(-)	frameshift		3273230	WP_085976170.1	IS3 family transposase	99.7	74.9	73.2
MGA_2742	LOCUS_27400	sequence1:3273917..3275821(-)	frameshift		3275984,3275822,3275790	WP_003400794.1	non-ribosomal peptide synthetase Nrp	68.0	17.1	57.2
MGA_2743	LOCUS_27410	sequence1:3275925..3280292(-)	frameshift		3275971,3275972,3280387,3280393,3275819,3277196,3275821,3275822,3275984,3275860,3277112,3275996,3275998,3275999	WP_005112588.1	non-ribosomal peptide synthetase	96.9	17.2	49.3
MGA_2744	LOCUS_27420	sequence1:3280340..3284221(-)	frameshift		3280426,3280396,3280375	WP_163682492.1	non-ribosomal peptide synthetase	97.8	22.5	49.9
MGA_2745	LOCUS_27430	sequence1:3284930..3285292(+)	frameshift,internal_stop_codon	3285291..3285293(+)	3284761,3284893	WP_011014093.1	ISL3-like element IS31831 family transposase	92.5	25.2	51.8
MGA_2747	LOCUS_27450	sequence1:3287123..3287434(+)	frameshift,internal_stop_codon	3287444..3287446(+),3287598..3287600(+)	3287578,3287359	WP_141270575.1	ISL3-like element ISAar39 family transposase	73.8	17.4	72.4
MGA_2748	LOCUS_27460	sequence1:3288003..3288815(+)	frameshift		3287929,3288806	WP_141270575.1	ISL3-like element ISAar39 family transposase	93.3	56.4	54.8
MGA_2749	LOCUS_27470	sequence1:3288812..3289147(+)	frameshift		3288806	WP_011726739.1	ISL3-like element IS1096 family transposase	96.4	24.5	58.3
MGA_2755	LOCUS_27530	sequence1:3294782..3296644(-)	partial			WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	49.5	64.6	68.6
MGA_2794	LOCUS_27920	sequence1:3336105..3337301(-)	partial			WP_011726850.1	LuxR C-terminal-related transcriptional regulator	74.1	74.7	36.4
MGA_2815	LOCUS_28130	sequence1:3354711..3355931(+)	partial			WP_011727070.1	PPE family protein	85.5	69.8	32.9
MGA_2820	LOCUS_28180	sequence1:3359683..3359952(-)	partial			WP_001040568.1	elongation factor Tu	95.5	22.3	50.0
MGA_2823	LOCUS_28210	sequence1:3361319..3362332(-)	partial			WP_162496169.1	NADP-dependent oxidoreductase	97.9	74.4	50.9
MGA_2829	LOCUS_28270	sequence1:3366958..3367377(+)	partial			WP_012257279.1	LLM class F420-dependent oxidoreductase	91.4	51.6	39.7
MGA_2846	LOCUS_28440	sequence1:3383481..3384581(-)	partial			WP_066877136.1	FAD-binding oxidoreductase	20.8	17.1	40.8
MGA_2853	LOCUS_28510	sequence1:3390692..3392344(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	47.6	46.8	63.7
MGA_2855	LOCUS_28530	sequence1:3393130..3394398(-)	partial			WP_011087309.1	TOMM precursor leader peptide-binding protein	35.5	19.9	26.5
MGA_2860	LOCUS_28580	sequence1:3400264..3401430(+)	partial			WP_223294576.1	DUF3179 domain-containing protein	71.9	80.2	23.2
MGA_2861	LOCUS_28590	sequence1:3401571..3403535(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	52.3	56.5	55.4
MGA_2868	LOCUS_28660	sequence1:3413353..3415944(+)	partial			WP_099318959.1	PE family protein	13.7	25.8	55.1
MGA_2870	LOCUS_28680	sequence1:3416673..3416987(-)	partial			WP_005089627.1	hypothetical protein	67.3	68.2	44.0
MGA_2883	LOCUS_28810	sequence1:3427028..3427699(+)	partial			WP_158894136.1	hypothetical protein	95.5	67.5	33.2
MGA_2887	LOCUS_28850	sequence1:3431668..3435024(+)	partial			WP_013221973.1	HEAT repeat domain-containing protein	32.4	31.6	23.5
MGA_2893	LOCUS_28910	sequence1:3440142..3442052(-)	partial			WP_014000955.1	PE family protein	18.9	18.8	65.8
MGA_2905	LOCUS_29030	sequence1:3454149..3454592(+)	partial			WP_003899146.1	hypothetical protein	99.3	67.0	71.2
MGA_2913	LOCUS_29110	sequence1:3472647..3473453(-)	frameshift		3472664,3473481	WP_003902238.1	apolipoprotein N-acyltransferase	95.5	29.3	82.4
MGA_2914	LOCUS_29120	sequence1:3473479..3475575(-)	frameshift		3473481	WP_003902238.1	apolipoprotein N-acyltransferase	85.4	66.1	74.5
MGA_2918	LOCUS_29160	sequence1:3478836..3480461(+)	partial			WP_011057303.1	DUF389 domain-containing protein	37.9	59.5	30.7
MGA_2946	LOCUS_29440	sequence1:3512028..3514370(-)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	67.6	67.0	39.3
MGA_2947	LOCUS_29450	sequence1:3514991..3515245(+)	frameshift		3515193,3515147,3514940	WP_225580817.1	IS3 family transposase	94.0	20.5	62.0
MGA_2949	LOCUS_29470	sequence1:3517491..3518189(+)	partial			WP_010950655.1	DUF5631 domain-containing protein	99.1	31.9	64.3
MGA_2954	LOCUS_29520	sequence1:3525714..3528308(-)	partial			WP_011727967.1	hypothetical protein	62.6	41.9	28.2
MGA_2957	LOCUS_29550	sequence1:3532072..3532992(+)	frameshift,internal_stop_codon	3532028..3532030(+)	3532033	WP_010886139.1	5'-3' exonuclease	99.7	77.6	84.3
MGA_2978	LOCUS_29760	sequence1:3554291..3565075(-)	frameshift		3561445,3558229,3564622	WP_005112588.1	non-ribosomal peptide synthetase	88.5	38.6	53.4
MGA_2987	LOCUS_29850	sequence1:3592982..3595318(-)	partial			WP_099318959.1	PE family protein	15.4	26.2	52.5
MGA_2989	LOCUS_29870	sequence1:3597163..3597288(-)	partial			WP_003411056.1	methionine synthase	100.0	3.4	92.7
MGA_2990	LOCUS_29880	sequence1:3597285..3597599(-)	partial			WP_003411056.1	methionine synthase	55.8	4.9	93.1
MGA_3001	LOCUS_29990	sequence1:3608071..3608373(-)	partial			WP_003411107.1	hypothetical protein	99.0	73.7	80.2
MGA_3010	LOCUS_30070	sequence1:3616291..3616644(-)	internal_stop_codon	3616795..3616797(-)		WP_005110629.1	plasmid replication initiator protein	99.1	23.2	56.9
MGA_3012	LOCUS_30090	sequence1:3616795..3617889(-)	internal_stop_codon	3616795..3616797(-)		WP_005110629.1	plasmid replication initiator protein	98.4	66.3	54.9
MGA_3013	LOCUS_30100	sequence1:3617886..3618122(-)	frameshift		3618124	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	96.2	17.3	62.7
MGA_3014	LOCUS_30110	sequence1:3618119..3618886(-)	frameshift		3618123,3618891	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	99.6	52.8	75.2
MGA_3015	LOCUS_30120	sequence1:3618808..3619323(-)	frameshift		3618891	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	81.9	28.9	42.6
MGA_3017	LOCUS_30140	sequence1:3620039..3620530(+)	frameshift		3620552,3620509	WP_005110620.1	hypothetical protein	95.1	58.6	58.3
MGA_3018	LOCUS_30150	sequence1:3620527..3620820(+)	frameshift		3620552,3620509	WP_005110620.1	hypothetical protein	86.6	31.6	65.5
MGA_3025	LOCUS_30220	sequence1:3627206..3627910(+)	partial			WP_023004240.1	AAA family ATPase	91.5	56.5	40.0
MGA_3030	LOCUS_30270	sequence1:3631410..3631745(-)	frameshift		3631749	WP_012296512.1	recombinase family protein	87.4	17.7	82.5
MGA_3031	LOCUS_30280	sequence1:3631672..3631977(-)	frameshift		3631749	WP_012296512.1	recombinase family protein	59.4	10.9	85.0
MGA_3035	LOCUS_30320	sequence1:3633737..3634111(-)	frameshift,internal_stop_codon	3634145..3634147(-)	3633964	WP_145162746.1	IS3-like element ISSme1 family transposase	36.3	11.8	54.3
MGA_3038	LOCUS_30350	sequence1:3635845..3636225(-)	partial			WP_003411130.1	hypothetical protein	57.9	67.8	45.0
MGA_3040	LOCUS_30370	sequence1:3637617..3638210(+)	partial			WP_003419329.1	TetR family transcriptional regulator KstR2	51.3	50.5	34.7
MGA_3042	LOCUS_30390	sequence1:3640110..3640328(+)	frameshift		3640274	WP_011727856.1	IS256 family transposase	73.6	12.3	74.1
MGA_3043	LOCUS_30400	sequence1:3640289..3640492(+)	frameshift		3640274	WP_011727856.1	IS256 family transposase	47.8	7.3	81.2
MGA_3047	LOCUS_30440	sequence1:3644388..3652922(-)	frameshift		3651059,3650980,3650995,3651062,3652349	WP_011028842.1	non-ribosomal peptide synthetase	72.2	27.7	44.7
MGA_3052	LOCUS_30490	sequence1:3659462..3664003(-)	frameshift		3659710	WP_013226861.1	non-ribosomal peptide synthetase	91.3	21.8	41.9
MGA_3054	LOCUS_30510	sequence1:3665973..3666566(-)	frameshift		3665889,3666370,3666028	WP_121576702.1	IS3 family transposase	58.9	31.2	36.2
MGA_3055	LOCUS_30520	sequence1:3667181..3667408(+)	frameshift		3667154	WP_003416786.1	IS30 family transposase	100.0	22.7	57.7
MGA_3072	LOCUS_30690	sequence1:3686414..3688207(-)	partial			WP_010950491.1	PE family protein	24.6	17.2	59.9
MGA_3136	LOCUS_31330	sequence1:3756421..3758187(+)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	55.1	55.4	80.0
MGA_3143	LOCUS_31400	sequence1:3769631..3805705(+)	partial			WP_147443659.1	non-ribosomal peptide synthetase	62.2	68.7	35.3
MGA_3145	LOCUS_31420	sequence1:3808754..3825475(+)	partial			WP_005112588.1	non-ribosomal peptide synthetase	58.5	39.6	46.0
MGA_3148	LOCUS_31450	sequence1:3828443..3828799(+)	partial			WP_003411454.1	TIGR01777 family oxidoreductase	52.5	20.6	69.4
MGA_3175	LOCUS_31710	sequence1:3860534..3860962(-)	partial			WP_005084922.1	heme-binding protein	57.7	74.5	56.1
MGA_3178	LOCUS_31740	sequence1:3864177..3866525(-)	partial			WP_010886133.1	PE family protein	10.1	14.5	46.8
MGA_3183	LOCUS_31790	sequence1:3871870..3872592(+)	frameshift		3871832	WP_003411507.1	HAD family hydrolase	99.2	81.8	68.9
MGA_3190	LOCUS_31860	sequence1:3878058..3879278(+)	frameshift		3879077	WP_011726768.1	IS1380-like element ISMsm3 family transposase	85.2	74.1	75.8
MGA_3191	LOCUS_31870	sequence1:3879311..3879463(+)	frameshift		3879077	WP_011726768.1	IS1380-like element ISMsm3 family transposase	98.0	10.5	87.8
MGA_3192	LOCUS_31880	sequence1:3879745..3882624(+)	partial			WP_010950524.1	PE family protein	12.3	19.6	63.6
MGA_3193	LOCUS_31890	sequence1:3882797..3883963(+)	frameshift		3882794,3883763	WP_011726768.1	IS1380-like element ISMsm3 family transposase	84.5	70.3	75.7
MGA_3194	LOCUS_31900	sequence1:3883996..3884148(+)	frameshift		3883762	WP_011726768.1	IS1380-like element ISMsm3 family transposase	98.0	10.5	87.8
MGA_3200	LOCUS_31960	sequence1:3889322..3890383(-)	partial			WP_003112998.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	66.3	72.8	39.8
MGA_3204	LOCUS_32000	sequence1:3892794..3895418(+)	partial			WP_010886084.1	PE family protein	14.4	16.1	44.4
MGA_3225	LOCUS_32210	sequence1:3918128..3918373(+)	partial			WP_003411608.1	hypothetical protein	93.8	45.5	77.6
MGA_3235	LOCUS_32310	sequence1:3927331..3927687(+)	partial			WP_223495338.1	hypothetical protein	33.1	57.1	60.0
MGA_3236	LOCUS_32320	sequence1:3927711..3929645(-)	partial			WP_003899240.1	Hsp70 family protein	73.8	77.0	65.6
MGA_3241	LOCUS_32370	sequence1:3934238..3934864(-)	partial			WP_010940624.1	class I SAM-dependent methyltransferase	51.9	43.1	34.5
MGA_3251	LOCUS_32470	sequence1:3941030..3942037(-)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	58.2	58.4	31.7
MGA_3253	LOCUS_32490	sequence1:3943884..3944195(-)	frameshift,internal_stop_codon	3943832..3943834(-)	3943666	WP_156439539.1	IS3 family transposase	72.8	17.9	45.3
MGA_3269	LOCUS_32650	sequence1:3962941..3963504(+)	partial			WP_003894961.1	alpha/beta hydrolase	82.9	50.2	48.4
MGA_3273	LOCUS_32690	sequence1:3965899..3966552(+)	partial			WP_013225120.1	class I SAM-dependent methyltransferase	71.9	78.0	36.4
MGA_3280	LOCUS_32760	sequence1:3973865..3974281(+)	frameshift		3973862	WP_013225434.1	M15 family metallopeptidase	68.1	43.5	40.0
MGA_3281	LOCUS_32770	sequence1:3974374..3976863(+)	partial			WP_010886108.1	PE family protein	14.8	14.3	48.0
MGA_3283	LOCUS_32790	sequence1:3977822..3979297(-)	partial			WP_010886177.1	PE family protein	30.8	26.7	40.1
MGA_3285	LOCUS_32810	sequence1:3981372..3986084(+)	partial			WP_011029283.1	hypothetical protein	71.7	64.4	37.2
MGA_3290	LOCUS_32860	sequence1:3995198..3996370(+)	partial			WP_003899159.1	hypothetical protein	55.1	67.2	50.9
MGA_3314	LOCUS_33100	sequence1:4026324..4026896(-)	partial			WP_011014460.1	IS1380-like element IS1677 family transposase	58.4	23.6	47.7
MGA_3315	LOCUS_33110	sequence1:4027703..4030411(+)	partial			WP_010950464.1	PE family protein	12.7	18.9	47.0
MGA_3316	LOCUS_33120	sequence1:4030462..4030920(+)	frameshift,internal_stop_codon	4030918..4030920(+),4031017..4031019(+)	4031052	WP_169733975.1	IS256 family transposase	74.3	27.0	44.2
MGA_3327	LOCUS_33230	sequence1:4041570..4042025(-)	frameshift,internal_stop_codon	4042145..4042147(-),4042169..4042171(-)	4042066	WP_011728521.1	IS30-like element ISMsm8 family transposase	99.3	32.2	72.0
MGA_3328	LOCUS_33240	sequence1:4042169..4042594(-)	frameshift,internal_stop_codon	4042768..4042770(-),4042144..4042146(-),4042168..4042170(-)	4042692,4042068	WP_011728521.1	IS30-like element ISMsm8 family transposase	98.6	29.8	60.4
MGA_3331	LOCUS_33270	sequence1:4045119..4045607(+)	partial			WP_011970928.1	IS110 family transposase	74.7	32.5	44.6
MGA_3332	LOCUS_33280	sequence1:4045912..4046250(+)	internal_stop_codon	4046266..4046268(+),4046248..4046250(+)		WP_011727590.1	IS1380-like element ISMsm11 family transposase	100.0	24.0	78.6
MGA_3335	LOCUS_33310	sequence1:4049889..4050326(+)	internal_stop_codon	4050324..4050326(+)		WP_003401488.1	type VII secretion system ESX-3 target PPE4	100.0	28.5	61.6
MGA_3338	LOCUS_33340	sequence1:4050931..4051191(+)	frameshift,internal_stop_codon	4051189..4051191(+)	4051058	WP_225580817.1	IS3 family transposase	59.3	13.2	74.5
MGA_3377	LOCUS_33730	sequence1:4092198..4092755(-)	frameshift		4092283,4092790	WP_003418263.1	IS3 family transposase	84.9	40.6	70.1
MGA_3378	LOCUS_33740	sequence1:4092758..4093153(-)	frameshift,internal_stop_codon	4093143..4093145(-)	4093136,4092790	WP_003418263.1	IS3 family transposase	73.3	24.8	66.7
MGA_3379	LOCUS_33750	sequence1:4093217..4093693(-)	partial			WP_085100849.1	hypothetical protein	73.4	81.2	41.0
MGA_3392	LOCUS_33880	sequence1:4104378..4104692(-)	frameshift		4104663	WP_011731328.1	glycogen debranching protein GlgX	85.6	12.3	48.3
MGA_3400	LOCUS_33960	sequence1:4112283..4115030(+)	partial			WP_003914906.1	LuxR family transcriptional regulator	68.9	55.8	37.9
MGA_3403	LOCUS_33990	sequence1:4117237..4117986(-)	partial			WP_011816256.1	class I SAM-dependent methyltransferase	49.8	48.8	32.8
MGA_3417	LOCUS_34130	sequence1:4130793..4131575(+)	partial			WP_013530922.1	ribonuclease T(2)	89.2	69.6	29.5
MGA_3421	LOCUS_34170	sequence1:4134799..4137750(-)	partial			WP_011122418.1	VIT domain-containing protein	63.7	84.3	29.3
MGA_3424	LOCUS_34200	sequence1:4139911..4143207(-)	partial			WP_003916655.1	PPE domain-containing protein	99.5	28.5	31.7
MGA_3426	LOCUS_34220	sequence1:4144154..4147270(+)	partial			WP_043790679.1	NB-ARC domain-containing protein	65.2	76.4	34.7
MGA_3448	LOCUS_34440	sequence1:4172328..4172603(-)	partial			WP_003419334.1	PPE family protein	96.7	15.2	52.3
MGA_3449	LOCUS_34450	sequence1:4172842..4175616(+)	partial			WP_010886125.1	PE domain-containing protein	33.3	30.3	52.1
MGA_3451	LOCUS_34470	sequence1:4176057..4176938(+)	partial			WP_003899159.1	hypothetical protein	56.7	51.4	47.0
MGA_3455	LOCUS_34510	sequence1:4179595..4180263(-)	partial			WP_015943650.1	hypothetical protein	34.2	70.4	47.4
MGA_3456	LOCUS_34520	sequence1:4180738..4181613(-)	partial			WP_010950935.1	glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX	42.3	38.4	44.7
MGA_3461	LOCUS_34570	sequence1:4184779..4185681(+)	partial			WP_010950832.1	PPE family protein	78.3	66.0	34.5
MGA_3464	LOCUS_34600	sequence1:4186720..4188771(+)	frameshift		4188744,4188726,4188735	WP_010886173.1	PE family protein	22.3	19.7	42.8
MGA_3467	LOCUS_34630	sequence1:4190541..4190969(+)	partial			WP_005110336.1	site-specific integrase	81.7	29.8	63.8
MGA_3468	LOCUS_34640	sequence1:4190982..4191194(+)	partial			WP_005110336.1	site-specific integrase	100.0	18.0	77.1
MGA_3483	LOCUS_34790	sequence1:4208349..4209131(-)	partial			WP_066567687.1	hypothetical protein	36.2	48.8	38.5
MGA_3498	LOCUS_34940	sequence1:4224708..4227272(+)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	62.3	61.8	45.4
MGA_3503	LOCUS_34990	sequence1:4233917..4243120(+)	partial			WP_013226599.1	non-ribosomal peptide synthetase	81.3	48.8	29.4
MGA_3504	LOCUS_35000	sequence1:4243140..4243697(+)	partial			WP_010974487.1	flavin reductase	91.4	49.2	35.9
MGA_3505	LOCUS_35010	sequence1:4243771..4245066(+)	partial			WP_011142384.1	cation:proton antiporter	95.6	54.6	37.4
MGA_3527	LOCUS_35230	sequence1:4268955..4270334(-)	partial			WP_005110323.1	chitinase	63.4	64.1	57.1
MGA_3533	LOCUS_35290	sequence1:4277275..4280844(-)	partial			WP_010921965.1	LysM domain-containing protein	8.7	28.0	40.5
MGA_3545	LOCUS_35410	sequence1:4286597..4287868(-)	partial			WP_063017182.1	Clp protease ClpP	63.6	54.6	47.4
MGA_3587	LOCUS_35830	sequence1:4312613..4313455(-)	partial			WP_015039654.1	pentapeptide repeat-containing protein	60.7	55.3	34.6
MGA_3591	LOCUS_35870	sequence1:4314391..4315248(-)	partial			WP_001002036.1	DNA damage-inducible protein D	38.9	40.5	51.4
MGA_3621	LOCUS_36170	sequence1:4344771..4344977(-)	partial			WP_003412226.1	hypothetical protein	64.7	43.4	61.2
MGA_3638	LOCUS_36340	sequence1:4369670..4370236(+)	partial			WP_003973221.1	GNAT family N-acetyltransferase	90.4	74.0	48.0
MGA_3675	LOCUS_36710	sequence1:4412312..4413916(+)	partial			WP_003911027.1	PE family protein	22.8	27.8	60.7
MGA_3676	LOCUS_36720	sequence1:4414020..4415450(+)	partial			WP_003911027.1	PE family protein	30.0	31.9	47.6
MGA_3705	LOCUS_37010	sequence1:4450218..4452800(+)	frameshift,internal_stop_codon	4452916..4452918(+),4452847..4452849(+)	4452441,4452798	WP_010950464.1	PE family protein	13.7	19.4	44.9
MGA_3712	LOCUS_37080	sequence1:4462927..4463112(-)	internal_stop_codon	4462927..4462929(-)		WP_010886118.1	PE family protein	100.0	8.2	67.2
MGA_3727	LOCUS_37230	sequence1:4483900..4489287(+)	partial			WP_206334115.1	type I polyketide synthase	99.6	35.2	47.3
MGA_3728	LOCUS_37240	sequence1:4489303..4494906(+)	partial			WP_206334115.1	type I polyketide synthase	95.2	33.5	51.4
MGA_3729	LOCUS_37250	sequence1:4494944..4509745(+)	partial			WP_206334115.1	type I polyketide synthase	76.2	73.5	41.4
MGA_3730	LOCUS_37260	sequence1:4509865..4515867(+)	partial			WP_206334115.1	type I polyketide synthase	87.2	34.1	46.1
MGA_3732	LOCUS_37280	sequence1:4516896..4517951(+)	partial			WP_010950651.1	type I polyketide synthase	91.5	7.7	51.7
MGA_3733	LOCUS_37290	sequence1:4518059..4521274(+)	frameshift		4521238,4521199	WP_067456433.1	type I polyketide synthase	97.9	27.3	51.7
MGA_3734	LOCUS_37300	sequence1:4521286..4534506(+)	frameshift		4521205,4521238	WP_206334115.1	type I polyketide synthase	83.5	71.8	42.7
MGA_3750	LOCUS_37460	sequence1:4552661..4554379(-)	internal_stop_codon	4552661..4552663(-)		WP_010950904.1	PE family protein	22.7	9.6	49.6
MGA_3758	LOCUS_37540	sequence1:4562673..4564412(-)	partial			WP_000615086.1	alpha/beta fold hydrolase	97.6	49.9	31.7
MGA_3759	LOCUS_37550	sequence1:4564496..4565794(-)	internal_stop_codon	4565816..4565818(-),4564496..4564498(-)		WP_011730278.1	MFS transporter	100.0	75.9	55.9
MGA_3760	LOCUS_37560	sequence1:4565816..4566031(-)	internal_stop_codon	4565816..4565818(-)		WP_003406326.1	MFS transporter	66.2	8.1	70.2
MGA_3777	LOCUS_37730	sequence1:4590084..4590476(+)	partial			WP_003899794.1	hypothetical protein	65.4	75.9	76.5
MGA_3778	LOCUS_37740	sequence1:4590816..4591121(+)	partial			WP_003899794.1	hypothetical protein	65.3	58.9	80.3
MGA_3798	LOCUS_37940	sequence1:4612655..4613254(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	42.2	40.0	46.4
MGA_3813	LOCUS_38090	sequence1:4626606..4627457(+)	partial			WP_010886067.1	PE family protein	99.3	54.0	39.0
MGA_3825	LOCUS_38210	sequence1:4638648..4643714(-)	partial			WP_002382239.1	membrane protein	26.2	46.2	22.1
MGA_3853	LOCUS_38490	sequence1:4661057..4661620(-)	partial			WP_014300514.1	WhiB family transcriptional regulator	39.0	74.7	51.4
MGA_3901	LOCUS_38970	sequence1:4686230..4686790(+)	partial			WP_003405912.1	DUF3556 domain-containing protein	88.2	28.3	63.4
MGA_3902	LOCUS_38980	sequence1:4686902..4687129(-)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	72.5
MGA_3912	LOCUS_39080	sequence1:4705133..4706284(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	57.4	54.0	29.4
MGA_3914	LOCUS_39100	sequence1:4707873..4708319(-)	partial			WP_005064825.1	MaoC family dehydratase	53.4	60.8	41.8
MGA_3918	LOCUS_39140	sequence1:4711250..4712938(+)	partial			WP_011729162.1	MDR family MFS transporter	90.0	73.5	64.3
MGA_3936	LOCUS_39320	sequence1:4734957..4736771(-)	partial			WP_005113275.1	PPE family protein	46.5	55.7	40.0
MGA_3941	LOCUS_39370	sequence1:4742847..4743617(+)	partial			WP_003407157.1	membrane protein	71.5	69.3	67.8
MGA_3968	LOCUS_39640	sequence1:4770888..4771517(+)	frameshift		4770904	WP_011728230.1	enoyl-CoA hydratase-related protein	97.6	74.7	65.2
MGA_3973	LOCUS_39690	sequence1:4776201..4776980(+)	frameshift		4776782	WP_011728227.1	class I adenylate-forming enzyme family protein	73.7	36.6	49.7
MGA_3974	LOCUS_39700	sequence1:4776898..4777728(+)	frameshift		4776782	WP_011728227.1	class I adenylate-forming enzyme family protein	97.1	52.8	66.8
MGA_3995	LOCUS_39910	sequence1:4799940..4800440(+)	internal_stop_codon	4800438..4800440(+)		WP_003899112.1	CAP domain-containing protein	85.5	64.3	75.4
MGA_4008	LOCUS_40040	sequence1:4813707..4814717(+)	partial			WP_003899159.1	hypothetical protein	72.6	72.1	55.5
MGA_4057	LOCUS_40530	sequence1:4876157..4876675(-)	partial			WP_010886117.1	PE family protein	68.6	8.6	45.8
MGA_4060	LOCUS_40560	sequence1:4880299..4880658(-)	partial			WP_011123284.1	YciI family protein	84.0	45.5	44.6
MGA_4075	LOCUS_40710	sequence1:4895673..4897076(-)	partial			WP_010950464.1	PE family protein	26.1	19.4	59.0
MGA_4097	LOCUS_40930	sequence1:4921842..4923644(-)	internal_stop_codon	4921842..4921844(-)		WP_010950464.1	PE family protein	21.8	21.5	55.7
MGA_4098	LOCUS_40940	sequence1:4924365..4924697(+)	partial			WP_003406566.1	DUF732 domain-containing protein	71.8	69.9	73.4
MGA_4105	LOCUS_41010	sequence1:4929396..4931186(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	69.6	66.1	77.3
MGA_4118	LOCUS_41140	sequence1:4943109..4944962(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.7	67.9	63.4
MGA_4120	LOCUS_41160	sequence1:4947815..4949818(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	44.4	49.7	87.5
MGA_4124	LOCUS_41200	sequence1:4953469..4954002(+)	partial			WP_003407152.1	membrane protein	87.0	66.4	40.9
MGA_4135	LOCUS_41310	sequence1:4964757..4966817(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	22.2	27.2	52.6
MGA_4137	LOCUS_41330	sequence1:4967457..4968230(+)	partial			WP_003900088.1	PPE family protein	69.6	30.2	50.3
MGA_4159	LOCUS_41550	sequence1:4996679..4997347(+)	partial			WP_003406288.1	DUF4190 domain-containing protein	37.4	41.9	68.7
MGA_4166	LOCUS_41620	sequence1:5004112..5004516(-)	partial			WP_003406258.1	anti-sigma E factor RseA	84.3	73.4	84.1
MGA_4174	LOCUS_41700	sequence1:5012913..5014730(+)	partial			WP_010950464.1	PE family protein	20.2	19.4	65.6
MGA_4175	LOCUS_41710	sequence1:5014975..5016771(+)	partial			WP_010886177.1	PE family protein	20.4	20.9	53.3
MGA_4199	LOCUS_41950	sequence1:5042156..5042704(+)	frameshift,internal_stop_codon	5042702..5042704(+)	5042722	WP_013224382.1	OB-fold domain-containing protein	87.4	50.3	47.2
MGA_4200	LOCUS_41960	sequence1:5042704..5043132(+)	frameshift		5042695	WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	85.2	37.9	47.9
MGA_4221	LOCUS_42170	sequence1:5068401..5070413(+)	partial			WP_010886177.1	PE family protein	18.2	20.9	56.6
MGA_4232	LOCUS_42280	sequence1:5087102..5087461(-)	internal_stop_codon	5087543..5087545(-)		WP_003406163.1	hypothetical protein	99.2	80.8	72.9
MGA_4235	LOCUS_42310	sequence1:5089393..5090409(-)	internal_stop_codon	5090497..5090499(-)		WP_003910446.1	PE family protein	22.5	12.2	51.3
MGA_4244	LOCUS_42400	sequence1:5100349..5101548(+)	frameshift,internal_stop_codon	5100297..5100299(+)	5100320,5100660,5100621	WP_003406066.1	hypothetical protein	35.6	38.3	86.6
MGA_4249	LOCUS_42450	sequence1:5103078..5103629(+)	frameshift		5103080,5103113,5103061	WP_009936776.1	DUF1697 domain-containing protein	93.4	82.6	72.7
MGA_4283	LOCUS_42790	sequence1:5133916..5137236(+)	partial			WP_003405919.1	PPE family protein	40.3	72.2	59.4
MGA_4285	LOCUS_42810	sequence1:5139538..5139867(-)	frameshift		5139920	WP_011728836.1	cytochrome P450	98.2	28.0	44.9
MGA_4286	LOCUS_42820	sequence1:5139840..5140565(-)	frameshift		5139911	WP_011728246.1	cytochrome P450	88.4	53.7	40.6
MGA_4292	LOCUS_42880	sequence1:5145529..5146707(+)	frameshift		5145476	WP_013229637.1	TetR/AcrR family transcriptional regulator	64.8	58.7	27.3
MGA_4303	LOCUS_42990	sequence1:5158460..5159047(+)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	45.6	61.3	59.6
MGA_4310	LOCUS_43060	sequence1:5164144..5164845(+)	frameshift		5164138	WP_003898734.1	hypothetical protein	98.7	80.8	77.9
MGA_4313	LOCUS_43090	sequence1:5166174..5166677(-)	partial			WP_003898733.1	hypothetical protein	82.0	59.1	78.8
MGA_4314	LOCUS_43100	sequence1:5167105..5167521(-)	frameshift		5167513,5167580	WP_003399879.1	type VII secretion system ESX-1 target PPE68	83.3	31.8	50.4
MGA_4315	LOCUS_43110	sequence1:5167482..5168027(-)	frameshift		5167513,5167580	WP_003399879.1	type VII secretion system ESX-1 target PPE68	83.4	41.0	51.7
MGA_4332	LOCUS_43280	sequence1:5183036..5184601(+)	partial			WP_003911027.1	PE family protein	22.6	26.9	61.0
MGA_4336	LOCUS_43320	sequence1:5188612..5189193(-)	frameshift		5189275	WP_003405815.1	DUF4245 domain-containing protein	99.5	82.4	76.0
MGA_4347	LOCUS_43430	sequence1:5200369..5201868(-)	partial			WP_010886091.1	PE family protein	21.6	17.8	61.1
MGA_4359	LOCUS_43550	sequence1:5212226..5213026(-)	frameshift		5213042,5213045	WP_003405732.1	RDD family protein	62.4	69.2	83.1
MGA_4368	LOCUS_43640	sequence1:5223359..5226097(+)	partial			WP_099318959.1	PE family protein	12.9	25.8	59.3
MGA_4369	LOCUS_43650	sequence1:5226318..5229056(+)	partial			WP_010886090.1	PE family protein	12.9	13.8	54.9
MGA_4377	LOCUS_43730	sequence1:5234228..5236741(-)	partial			WP_010886090.1	PE family protein	14.2	13.5	48.7
MGA_4378	LOCUS_43740	sequence1:5237248..5237691(-)	partial			WP_026311868.1	formylglycine-generating enzyme family protein	54.4	24.8	58.5
MGA_4379	LOCUS_43750	sequence1:5237828..5238013(-)	partial			WP_003405636.1	class II glutamine amidotransferase	100.0	21.3	60.7
MGA_4407	LOCUS_44030	sequence1:5266442..5267896(-)	partial			WP_011731079.1	adenylate/guanylate cyclase domain-containing protein	74.2	64.3	32.0
MGA_4411	LOCUS_44070	sequence1:5270287..5270760(+)	frameshift		5270287	WP_085976170.1	IS3 family transposase	84.1	33.9	71.2
MGA_4413	LOCUS_44090	sequence1:5272698..5273024(+)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	38.9	10.9	66.7
MGA_4416	LOCUS_44120	sequence1:5275644..5275889(+)	partial			WP_225580817.1	IS3 family transposase	100.0	21.0	81.5
MGA_4417	LOCUS_44130	sequence1:5275906..5276259(+)	partial			WP_011228388.1	site-specific integrase	55.6	16.6	43.1
MGA_4427	LOCUS_44230	sequence1:5285985..5286278(-)	partial			WP_005110193.1	hypothetical protein	78.4	74.0	55.8
MGA_4444	LOCUS_44400	sequence1:5304144..5305664(+)	partial			WP_010886177.1	PE family protein	25.5	20.9	48.1
MGA_4463	LOCUS_44590	sequence1:5329131..5329712(-)	internal_stop_codon	5329812..5329814(-)		WP_003405165.1	DUF5642 family protein	99.0	75.8	72.3
MGA_4472	LOCUS_44680	sequence1:5335996..5336862(+)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	57.6	32.9	39.8
MGA_4475	LOCUS_44710	sequence1:5339871..5341862(+)	partial			WP_005094336.1	glycosyltransferase family 2 protein	29.3	66.6	32.2
MGA_4477	LOCUS_44730	sequence1:5342929..5343885(-)	partial			WP_082769289.1	class I SAM-dependent methyltransferase	78.3	74.6	51.0
MGA_4483	LOCUS_44790	sequence1:5349716..5350477(-)	partial			WP_033448326.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	45.1	45.2	42.2
MGA_4484	LOCUS_44800	sequence1:5350571..5351692(-)	partial			WP_011027473.1	glycogen synthase	70.2	74.4	30.7
MGA_4487	LOCUS_44830	sequence1:5354840..5355664(+)	partial			WP_164921539.1	FkbM family methyltransferase	59.9	74.3	35.2
MGA_4493	LOCUS_44890	sequence1:5360970..5361305(+)	partial			WP_010907580.1	zinc ribbon domain-containing protein	52.3	58.6	89.7
MGA_4515	LOCUS_45110	sequence1:5388023..5389354(+)	partial			WP_010886108.1	PE family protein	30.0	15.6	60.9
MGA_4520	LOCUS_45160	sequence1:5393154..5393456(+)	frameshift		5393093,5393045	WP_011730597.1	hypothetical protein	97.0	42.7	56.7
MGA_4522	LOCUS_45180	sequence1:5395925..5397931(-)	partial			WP_010950839.1	PPE family protein	61.1	58.4	39.0
MGA_4523	LOCUS_45190	sequence1:5398364..5398636(+)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	74.4
MGA_4528	LOCUS_45240	sequence1:5403226..5404287(-)	partial			WP_099318959.1	PE family protein	37.1	28.6	56.5
MGA_4529	LOCUS_45250	sequence1:5404406..5406115(-)	partial			WP_003911027.1	PE family protein	21.6	27.6	60.2
MGA_4530	LOCUS_45260	sequence1:5406191..5407897(-)	partial			WP_010950464.1	PE family protein	20.2	18.9	57.4
MGA_4532	LOCUS_45280	sequence1:5408958..5409881(+)	partial			WP_011730613.1	diiron oxygenase	98.0	73.1	72.8
MGA_4539	LOCUS_45350	sequence1:5415502..5417262(+)	partial			WP_010950791.1	PE family protein	21.3	20.3	52.8
MGA_4557	LOCUS_45530	sequence1:5438848..5442621(-)	frameshift,internal_stop_codon	5438848..5438850(-)	5442760	WP_010886165.1	PE family protein	9.1	7.4	57.9
MGA_4559	LOCUS_45550	sequence1:5443614..5444102(-)	partial			WP_005086416.1	hypothetical protein	67.9	76.4	43.2
MGA_4560	LOCUS_45560	sequence1:5444383..5445693(-)	partial			WP_003401347.1	PPE family protein	47.7	36.9	50.0
MGA_4562	LOCUS_45580	sequence1:5447772..5448002(+)	partial			WP_003414184.1	hypothetical protein	53.9	65.1	68.3
MGA_4565	LOCUS_45610	sequence1:5449446..5450081(+)	partial			WP_005110186.1	hypothetical protein	94.8	73.7	29.6
MGA_4576	LOCUS_45720	sequence1:5459027..5467909(-)	partial			WP_122524938.1	PPE domain-containing protein	66.3	58.9	38.6
MGA_4583	LOCUS_45790	sequence1:5477021..5478466(+)	partial			WP_010950932.1	MFS transporter	96.5	43.8	35.0
MGA_4607	LOCUS_46030	sequence1:5504428..5504715(-)	partial			WP_003404614.1	DUF2537 domain-containing protein	74.7	75.5	60.6
MGA_4609	LOCUS_46050	sequence1:5505548..5505835(-)	partial			WP_003404606.1	MarR family transcriptional regulator	100.0	66.4	87.4
MGA_4622	LOCUS_46180	sequence1:5516986..5518077(+)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	47.7	41.0	70.1
MGA_4637	LOCUS_46330	sequence1:5532745..5533131(-)	frameshift		5533255	WP_003404418.1	SRPBCC family protein	97.7	79.6	80.8
MGA_4643	LOCUS_46390	sequence1:5537934..5538515(-)	partial			WP_003407152.1	membrane protein	74.1	65.0	62.9
MGA_4657	LOCUS_46530	sequence1:5549541..5549897(+)	partial			WP_003417257.1	pilin structural subunit Mtp	54.2	60.2	60.9
MGA_4659	LOCUS_46550	sequence1:5550492..5551226(+)	partial			WP_003407157.1	membrane protein	75.0	70.1	41.5
MGA_4663	LOCUS_46590	sequence1:5554026..5555198(-)	internal_stop_codon	5555255..5555257(-)		WP_011730084.1	MCE family protein	87.9	73.6	66.2
MGA_4678	LOCUS_46740	sequence1:5570381..5571289(+)	frameshift		5571091	WP_011730401.1	NAD(P)-dependent oxidoreductase	79.5	65.7	42.8
MGA_4681	LOCUS_46770	sequence1:5574122..5574589(+)	partial			WP_003409199.1	DUF4189 domain-containing protein	59.4	63.6	51.1
MGA_4693	LOCUS_46890	sequence1:5585057..5586739(+)	partial			WP_010950544.1	PE family protein	21.8	24.8	52.5
MGA_4761	LOCUS_47570	sequence1:5658791..5659444(-)	frameshift		5659467	WP_003898609.1	M15 family metallopeptidase	90.3	76.6	78.1
MGA_4763	LOCUS_47590	sequence1:5660293..5661111(+)	partial			WP_005082057.1	cellulose-binding domain-containing protein	37.1	71.1	52.5
MGA_4779	LOCUS_47750	sequence1:5674632..5675594(+)	partial			WP_013530979.1	SDR family NAD(P)-dependent oxidoreductase	62.2	66.7	39.4
MGA_4780	LOCUS_47760	sequence1:5675591..5676406(+)	partial			WP_013529311.1	acetoacetate decarboxylase	35.8	39.1	35.0
MGA_4781	LOCUS_47770	sequence1:5676409..5677623(+)	partial			WP_013225697.1	amidohydrolase family protein	71.8	72.9	30.4
MGA_4783	LOCUS_47790	sequence1:5679210..5681084(+)	frameshift,internal_stop_codon	5679583..5679585(+),5679349..5679351(+),5679346..5679348(+),5679196..5679198(+),5679148..5679150(+)	5679162,5679615,5679063	WP_010886175.1	PE family protein	18.1	7.4	36.3
MGA_4796	LOCUS_47920	sequence1:5696839..5697594(+)	partial			WP_011022091.1	restriction endonuclease subunit S	81.3	69.0	37.6
MGA_4800	LOCUS_47960	sequence1:5701031..5701732(-)	partial			WP_013528694.1	AAA family ATPase	99.6	68.3	34.5
MGA_4824	LOCUS_48200	sequence1:5723028..5723579(-)	partial			WP_003903189.1	response regulator transcription factor	99.5	71.4	87.9
MGA_4837	LOCUS_48330	sequence1:5736603..5736782(+)	partial			WP_003404135.1	DUF3073 domain-containing protein	66.1	65.0	92.3
MGA_4848	LOCUS_48440	sequence1:5749118..5749276(-)	frameshift		5749286	WP_003898592.1	VOC family protein	100.0	45.2	71.2
MGA_4849	LOCUS_48450	sequence1:5749239..5749466(-)	frameshift		5749286	WP_003898592.1	VOC family protein	81.3	53.0	78.7
MGA_4856	LOCUS_48520	sequence1:5755279..5755743(+)	frameshift		5755235	WP_003403998.1	hypothetical protein	98.7	75.9	61.0
MGA_4859	LOCUS_48550	sequence1:5756994..5758061(+)	partial			WP_003401347.1	PPE family protein	56.1	36.0	53.0
MGA_4864	LOCUS_48600	sequence1:5760679..5761557(+)	partial			WP_011027928.1	DMT family transporter	75.3	67.9	45.3
MGA_4875	LOCUS_48710	sequence1:5773006..5774259(-)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	42.2	34.5	57.1
MGA_4884	LOCUS_48800	sequence1:5785152..5786702(+)	partial			WP_011729255.1	serine/threonine-protein kinase	59.9	62.3	64.4
MGA_4897	LOCUS_48930	sequence1:5797990..5798274(+)	partial			WP_004190520.1	NADPH-dependent 2,4-dienoyl-CoA reductase	91.5	12.6	41.9
MGA_4900	LOCUS_48960	sequence1:5800568..5801959(+)	partial			WP_003900090.1	PPE family protein	65.0	59.3	53.8
MGA_4914	LOCUS_49100	sequence1:5818002..5819735(-)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	56.2	55.5	66.8
MGA_4925	LOCUS_49210	sequence1:5829708..5830286(-)	partial			WP_003418925.1	DUF2510 domain-containing protein	99.5	73.5	56.5
MGA_4926	LOCUS_49220	sequence1:5830520..5830903(-)	partial			WP_003418931.1	LppP/LprE family lipoprotein	90.6	52.3	77.4
MGA_4957	LOCUS_49530	sequence1:5863332..5867558(+)	partial			WP_010886177.1	PE family protein	8.4	20.9	46.7
MGA_4961	LOCUS_49570	sequence1:5870921..5875879(+)	frameshift,internal_stop_codon	5875991..5875993(+)	5872458,5871882,5872010,5871884,5871054,5871888,5871057,5871762,5871064,5871066,5875746,5875747,5874916,5876134,5874919,5874922,5875755,5871663,5872113,5875767,5871417,5875966	WP_010886173.1	PE family protein	7.0	16.2	54.3
MGA_4978	LOCUS_49740	sequence1:5903258..5903584(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	97.2	19.5	48.6
MGA_4980	LOCUS_49760	sequence1:5904133..5904558(+)	partial			WP_003898701.1	IS5 family transposase	100.0	49.1	82.3
MGA_5006	LOCUS_50020	sequence1:5930613..5932514(-)	frameshift,internal_stop_codon	5932526..5932528(-),5932574..5932576(-),5932138..5932140(-)	5932371,5932549,5932119,5932477,5932639	WP_010950546.1	PE family protein	22.6	15.3	35.0
MGA_5031	LOCUS_50270	sequence1:5956344..5956889(+)	partial			WP_003408271.1	protein disulfide oxidoreductase	74.6	74.2	57.8
MGA_5070	LOCUS_50660	sequence1:5993256..5994305(+)	internal_stop_codon	5994303..5994305(+)		WP_057003513.1	ISNCY family transposase	100.0	76.2	56.4
MGA_5072	LOCUS_50680	sequence1:5994594..5994776(-)	partial			WP_013225051.1	MarR family transcriptional regulator	95.0	59.4	64.9
MGA_5082	LOCUS_50780	sequence1:6002986..6004281(-)	partial			WP_003911027.1	PE family protein	56.4	58.8	36.2
MGA_5116	LOCUS_51120	sequence1:6037159..6037845(-)	partial			WP_003419610.1	UDP-glucose 4-epimerase	99.1	72.0	83.2
MGA_5119	LOCUS_51150	sequence1:6040052..6042097(+)	partial			WP_010886177.1	PE family protein	19.4	22.6	56.8
MGA_5172	LOCUS_51680	sequence1:6090971..6093199(+)	partial			WP_013227688.1	SpoIIE family protein phosphatase	93.3	51.8	38.9
MGA_5185	LOCUS_51800	sequence1:6107560..6108804(+)	frameshift		6107483	WP_003419768.1	membrane protein	80.2	74.7	65.6
MGA_5192	LOCUS_51870	sequence1:6115051..6115755(+)	partial			WP_050039320.1	PadR family transcriptional regulator	61.5	76.6	76.4
MGA_5193	LOCUS_51880	sequence1:6115915..6118491(+)	partial			WP_010886074.1	PE family protein	14.6	21.5	43.3
MGA_5204	LOCUS_51990	sequence1:6130234..6130602(-)	partial			WP_003419814.1	hypothetical protein	36.1	34.1	54.5
MGA_5219	LOCUS_52140	sequence1:6147841..6148284(-)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	65.3	72.2	77.1
MGA_5227	LOCUS_52220	sequence1:6156299..6157120(+)	partial			WP_003420421.1	lipid uptake coordinator LucA	59.0	63.4	83.2
MGA_5229	LOCUS_52240	sequence1:6158146..6158484(+)	partial			WP_003895248.1	lipoprotein LpqH	97.3	69.0	67.0
MGA_5244	LOCUS_52390	sequence1:6176030..6176284(+)	partial			WP_003401485.1	type VII secretion system ESX-3 target PE5	79.8	65.7	58.2
MGA_5257	LOCUS_52520	sequence1:6187874..6189385(-)	frameshift		6189402	WP_010907996.1	long-chain fatty acid--CoA ligase	99.8	83.7	72.5
MGA_5258	LOCUS_52530	sequence1:6189283..6189678(-)	frameshift		6189402	WP_011729678.1	long-chain fatty acid--CoA ligase	70.2	15.4	75.0
MGA_5289	LOCUS_52840	sequence1:6218809..6222069(+)	partial			WP_010950666.1	PE family protein	10.6	22.9	37.4
MGA_5298	LOCUS_52910	sequence1:6235979..6236278(+)	partial			WP_003420544.1	lipoprotein LpqH	99.0	61.6	80.6
MGA_5304	LOCUS_52970	sequence1:6239710..6242115(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	19.0	27.2	49.3
MGA_5306	LOCUS_52990	sequence1:6243256..6243774(-)	frameshift		6243282	WP_010950639.1	PecA family PE domain-processing aspartic protease	88.4	27.2	52.0
MGA_5315	LOCUS_53080	sequence1:6251069..6253258(-)	partial			WP_010950556.1	PPE family protein	42.8	42.9	49.2
MGA_5323	LOCUS_53160	sequence1:6261412..6263214(+)	partial			WP_010886177.1	PE family protein	20.7	21.2	62.1
MGA_5324	LOCUS_53170	sequence1:6263335..6264561(-)	partial			WP_003113577.1	alpha/beta fold hydrolase	60.8	76.5	32.3
MGA_5325	LOCUS_53180	sequence1:6264986..6268030(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	9.0	16.3	59.3
MGA_5340	LOCUS_53320	sequence1:6284655..6285011(+)	frameshift		6284904,6284589	WP_003901726.1	arabinosyltransferase EmbC	71.2	7.7	89.3
MGA_5341	LOCUS_53330	sequence1:6285493..6286038(+)	frameshift		6285938,6285491,6285284	WP_003899696.1	arabinosyltransferase EmbA	82.3	13.5	72.5
MGA_5342	LOCUS_53340	sequence1:6286035..6288311(+)	frameshift		6287745,6285939,6287508	WP_003899696.1	arabinosyltransferase EmbA	65.2	45.0	82.2
MGA_5343	LOCUS_53350	sequence1:6288217..6288567(+)	partial			WP_003899696.1	arabinosyltransferase EmbA	100.0	10.6	92.2
MGA_5344	LOCUS_53360	sequence1:6288564..6289133(+)	frameshift		6289095,6288591	WP_003901728.1	arabinosyltransferase EmbB	82.5	14.2	86.5
MGA_5345	LOCUS_53370	sequence1:6289211..6291790(+)	frameshift		6289094	WP_010950939.1	arabinosyltransferase EmbB	100.0	80.1	84.5
MGA_5351	LOCUS_53430	sequence1:6296272..6296937(+)	frameshift		6296706,6296691,6297029,6296709,6297048,6296703	WP_010950451.1	PE family protein	65.6	17.4	59.3
MGA_5379	LOCUS_53710	sequence1:6336028..6336378(+)	frameshift		6336372	WP_003899719.1	metallopeptidase family protein	99.1	83.9	84.3
MGA_5383	LOCUS_53750	sequence1:6339574..6340494(+)	partial			WP_235624060.1	LCP family protein	96.1	68.7	69.4
MGA_5386	LOCUS_53780	sequence1:6342080..6342868(-)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	72.2	58.0
MGA_5389	LOCUS_53810	sequence1:6345552..6346256(+)	internal_stop_codon	6346254..6346256(+)		WP_003399745.1	TMEM165/GDT1 family protein	96.2	75.2	64.2
MGA_5408	LOCUS_54000	sequence1:6367993..6369078(+)	partial			WP_003899736.1	type VII secretion system ESX-1 associated protein EspE	75.9	68.4	32.9
MGA_5410	LOCUS_54020	sequence1:6370859..6372199(+)	partial			WP_003399995.1	type VII secretion system ESX-1 target EspB	61.2	58.9	47.1
MGA_5417	LOCUS_54090	sequence1:6378472..6379236(+)	partial			WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	78.7	27.6	57.7
MGA_5423	LOCUS_54150	sequence1:6384791..6385993(+)	partial			WP_003399828.1	type VII secretion system ESX-1 associated protein EspE	61.8	58.1	31.2
MGA_5427	LOCUS_54190	sequence1:6387502..6388842(-)	partial			WP_003399995.1	type VII secretion system ESX-1 target EspB	60.8	58.9	46.4
MGA_5443	LOCUS_54350	sequence1:6407435..6408229(+)	partial			WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	100.0	39.6	65.5
MGA_5445	LOCUS_54370	sequence1:6409888..6410715(+)	partial			WP_003901751.1	type VII secretion system ESX-1 associated protein EspJ	81.8	72.5	47.0
MGA_5447	LOCUS_54390	sequence1:6412021..6414360(-)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	62.5	65.7	49.2
MGA_5452	LOCUS_54440	sequence1:6419607..6420260(-)	partial			WP_003907154.1	type VII secretion system ESX-2 AAA family ATPase EccA2	84.3	29.6	88.0
MGA_5460	LOCUS_54520	sequence1:6426766..6427593(-)	frameshift,internal_stop_codon	6427687..6427689(-)	6427813	WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	92.7	27.5	42.0
MGA_5461	LOCUS_54530	sequence1:6427802..6428689(-)	frameshift,internal_stop_codon	6427687..6427689(-)	6427813	WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	93.2	32.5	67.6
MGA_5464	LOCUS_54560	sequence1:6429399..6429887(-)	partial			WP_003410707.1	hypothetical protein	87.7	70.6	45.1