{ "type": "genome", "identifier": "GCF_003412455.1", "organism": "Deminuibacter soli", "title": "Deminuibacter soli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "guangdong institute of microbiology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003412455.1", "bioproject": "PRJNA224116", "biosample": "SAMN09748250", "wgs_master": "QTJU00000000.1", "refseq_category": "reference genome", "taxid": "2291815", "species_taxid": "2291815", "organism_name": "Deminuibacter soli", "infraspecific_name": "strain=K23C18032701", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/21", "asm_name": "ASM341245v1", "asm_submitter": "guangdong institute of microbiology", "gbrs_paired_asm": "GCA_003412455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/412/455/GCF_003412455.1_ASM341245v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5834569", "genome_size_ungapped": "5834569", "gc_percent": "47.000000", "replicon_count": "0", "scaffold_count": "24", "contig_count": "24", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003412455.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "4850", "protein_coding_gene_count": "4784", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-21", "dateModified": "2018-08-21", "datePublished": "2018-08-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Deminuibacter soli" ], "sample_taxid": [ "2291815" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Dinghushan Biosphere Reserve" ], "sample_host_location_id": [], "data_size": "1.646 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5834569", "Number of Sequences": "24", "Longest Sequences (bp)": "1448020", "N50 (bp)": "481709", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "47.2", "Number of CDSs": "4766", "Average Protein Length": "356.4", "Coding Ratio (%)": "87.3", "Number of rRNAs": "3", "Number of tRNAs": "48", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Deminuibacter soli", "strain": "strain=K23C18032701", "accession": "GCA_003412455.1", "taxid": 2291815, "species_taxid": 2291815, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1932, 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null, "spiral_cell_shape": null }, "_genome_taxon": [ "Deminuibacter", "soli" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }