# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_4	LOCUS_00030	sequence01:2645..3031(-)	internal_stop_codon	3068..3070(-)		WP_048096027.1	S8 family serine peptidase	94.5	9.0	38.0
MGA_5	LOCUS_00040	sequence01:3068..3883(-)	internal_stop_codon	3068..3070(-)		WP_003232562.1	serine protease Isp	60.5	49.2	43.0
MGA_15	LOCUS_00140	sequence01:11621..12169(-)	partial			WP_009966473.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	72.5	78.4	62.1
MGA_16	LOCUS_00150	sequence01:12424..13128(-)	partial			WP_009931622.1	SGNH/GDSL hydrolase family protein	86.8	74.4	31.1
MGA_21	LOCUS_00200	sequence01:17348..19297(+)	partial			WP_000745011.1	EAL domain-containing protein	87.7	62.6	37.3
MGA_35	LOCUS_00340	sequence01:36284..36850(-)	partial			WP_000521059.1	hypothetical protein	95.2	70.9	30.5
MGA_53	LOCUS_00520	sequence01:54213..56039(-)	partial			WP_005816048.1	sigma-54-dependent Fis family transcriptional regulator	81.2	68.3	42.1
MGA_66	LOCUS_00650	sequence01:67570..67785(-)	frameshift,internal_stop_codon	67488..67490(-),67455..67457(-)	67584,67514	WP_011102075.1	AAA family ATPase	95.8	27.1	43.5
MGA_85	LOCUS_00840	sequence01:83226..83660(-)	partial			WP_012583691.1	RidA family protein	70.8	76.8	36.9
MGA_102	LOCUS_01010	sequence01:102712..103518(-)	partial			WP_011729986.1	sugar phosphate isomerase/epimerase	51.1	56.4	30.7
MGA_116	LOCUS_01150	sequence01:117373..117675(-)	partial			WP_010963768.1	NUDIX domain-containing protein	91.0	44.2	45.1
MGA_125	LOCUS_01240	sequence01:124443..124892(-)	partial			WP_005812744.1	C40 family peptidase	89.9	51.8	44.0
MGA_146	LOCUS_01450	sequence01:154033..154467(-)	partial			WP_005764784.1	SDR family NAD(P)-dependent oxidoreductase	99.3	57.4	62.2
MGA_183	LOCUS_01820	sequence01:189566..190114(+)	partial			WP_003246313.1	YndM family protein	56.6	82.8	38.7
MGA_185	LOCUS_01840	sequence01:190779..192389(+)	partial			WP_000790944.1	S8 family peptidase	56.7	74.3	40.2
MGA_186	LOCUS_01850	sequence01:192593..195163(-)	partial			WP_011948968.1	helicase	50.9	74.3	40.1
MGA_189	LOCUS_01880	sequence01:197324..197611(-)	partial			WP_002289228.1	DUF2512 family protein	83.2	57.9	36.1
MGA_191	LOCUS_01900	sequence01:199044..199337(+)	partial			WP_003246542.1	glucose starvation-inducible protein GsiB	91.8	68.3	60.7
MGA_193	LOCUS_01920	sequence01:199893..200696(-)	partial			WP_010930196.1	inverse autotransporter beta-barrel domain-containing protein	68.2	15.3	30.0
MGA_194	LOCUS_01930	sequence01:200746..201729(-)	frameshift,internal_stop_codon	200781..200783(-),200817..200819(-)	200769,200778,200835,200772	WP_011962350.1	leucine-rich repeat domain-containing protein	79.8	58.2	43.0
MGA_203	LOCUS_02020	sequence01:207366..208472(+)	partial			WP_001012262.1	HAMP domain-containing sensor histidine kinase	72.0	62.1	41.4
MGA_205	LOCUS_02040	sequence01:209003..209524(+)	partial			WP_178940705.1	site-specific integrase	97.7	45.7	62.1
MGA_206	LOCUS_02050	sequence01:209995..210498(+)	internal_stop_codon	209923..209925(+)		WP_000216682.1	DsbA family oxidoreductase	99.4	77.3	47.3
MGA_217	LOCUS_02160	sequence01:216757..217029(-)	partial			WP_000584342.1	GNAT family N-acetyltransferase	92.2	46.1	51.8
MGA_260	LOCUS_02580	sequence02:6852..7076(-)	partial			WP_000052064.1	F0F1 ATP synthase subunit C	55.4	56.9	85.4
MGA_290	LOCUS_02880	sequence02:35039..35620(-)	partial			WP_000346278.1	DNA-directed RNA polymerase subunit delta	47.7	52.0	55.4
MGA_314	LOCUS_03120	sequence02:66071..66589(+)	partial			WP_003227448.1	spore coat protein GerQ	43.6	41.4	72.0
MGA_350	LOCUS_03480	sequence02:99536..100576(+)	partial			WP_010921318.1	serine hydrolase	76.9	45.9	35.1
MGA_357	LOCUS_03550	sequence02:106257..106439(+)	frameshift,internal_stop_codon	106609..106611(+)	106264,106571,106436	WP_000487192.1	NCS2 family permease	91.7	12.6	50.9
MGA_367	LOCUS_03650	sequence02:114412..114675(+)	partial			WP_004255008.1	zinc ribbon domain-containing protein	60.9	58.4	49.1
MGA_380	LOCUS_03780	sequence02:128193..128837(-)	frameshift,internal_stop_codon	128853..128855(-)	128904	WP_010963438.1	amino acid ABC transporter substrate-binding protein/permease	97.2	43.6	49.5
MGA_381	LOCUS_03790	sequence02:128899..129681(-)	frameshift,internal_stop_codon	128853..128855(-)	128904	WP_010963438.1	amino acid ABC transporter substrate-binding protein/permease	91.9	50.5	46.9
MGA_390	LOCUS_03880	sequence02:138100..138561(+)	partial			WP_000568128.1	YdeI/OmpD-associated family protein	84.3	56.4	31.0
MGA_404	LOCUS_04020	sequence02:151125..152822(-)	partial			WP_011861655.1	cell wall-binding protein Cwp22	38.9	34.2	45.4
MGA_405	LOCUS_04030	sequence02:153021..156965(-)	partial			WP_010886455.1	endonuclease YhcR	71.2	77.9	53.5
MGA_413	LOCUS_04110	sequence02:166822..167913(-)	partial			WP_064255467.1	polysaccharide pyruvyl transferase family protein	73.8	71.1	26.1
MGA_423	LOCUS_04210	sequence02:177040..177354(-)	partial			WP_235947677.1	XdhC/CoxI family protein	63.5	16.1	50.0
MGA_425	LOCUS_04230	sequence02:178030..178908(+)	frameshift		178012	WP_211254473.1	IS3 family transposase	96.6	61.5	37.1
MGA_426	LOCUS_04240	sequence02:179005..179877(-)	partial			WP_145017523.1	hypothetical protein	89.7	53.7	27.9
MGA_434	LOCUS_04320	sequence02:189990..190436(+)	partial			WP_011388668.1	heme-binding protein	86.5	74.0	43.8
MGA_525	LOCUS_05220	sequence03:44603..45250(+)	partial			WP_004080600.1	YgcG family protein	65.1	58.8	45.0
MGA_547	LOCUS_05440	sequence03:64151..64708(+)	partial			WP_000114302.1	copper resistance CopC/CopD family protein	61.1	21.7	29.4
MGA_553	LOCUS_05500	sequence03:69168..70496(+)	partial			WP_050761141.1	HAMP domain-containing sensor histidine kinase	64.7	67.6	31.6
MGA_575	LOCUS_05720	sequence03:89454..90047(+)	partial			WP_012583758.1	YitT family protein	91.9	65.5	25.8
MGA_595	LOCUS_05920	sequence03:110714..111352(+)	partial			WP_001832757.1	rhomboid family intramembrane serine protease	82.5	35.4	27.3
MGA_598	LOCUS_05950	sequence03:114609..117278(-)	partial			WP_003234295.1	phosphoserine phosphatase RsbU	26.9	70.7	39.3
MGA_649	LOCUS_06460	sequence03:163912..164766(-)	partial			WP_001233744.1	polysaccharide deacetylase family protein	75.4	60.6	44.0
MGA_704	LOCUS_06990	sequence04:3010..6666(-)	partial			WP_010941907.1	multicopper oxidase	63.9	57.6	28.1
MGA_723	LOCUS_07180	sequence04:20009..20227(-)	partial			WP_011815871.1	OFA family MFS transporter	86.1	15.0	77.4
MGA_743	LOCUS_07380	sequence04:41757..42359(-)	partial			WP_011016479.1	VWA domain-containing protein	89.5	73.8	53.3
MGA_746	LOCUS_07410	sequence04:43858..44190(+)	frameshift,internal_stop_codon	44414..44416(+)	43912,44173,44431	WP_010886483.1	thiazole synthase	80.0	34.4	80.7
MGA_747	LOCUS_07420	sequence04:44232..44414(+)	frameshift,internal_stop_codon	44413..44415(+)	44172,44430	WP_000931981.1	thiazole synthase	100.0	23.4	81.7
MGA_762	LOCUS_07570	sequence04:59495..61264(-)	partial			WP_011022493.1	PQQ-binding-like beta-propeller repeat protein	65.0	29.9	23.9
MGA_766	LOCUS_07610	sequence04:64958..66637(-)	partial			WP_010965588.1	M4 family metallopeptidase	99.3	66.1	37.9
MGA_783	LOCUS_07780	sequence04:87693..87941(+)	partial			WP_011108674.1	glycoside hydrolase family 95 protein	81.7	8.2	48.5
MGA_784	LOCUS_07790	sequence04:87960..88919(-)	partial			WP_011461003.1	aldolase catalytic domain-containing protein	89.0	51.4	34.0
MGA_790	LOCUS_07850	sequence04:94548..95468(-)	partial			WP_011459114.1	HD-GYP domain-containing protein	60.8	43.7	40.1
MGA_813	LOCUS_08080	sequence04:123526..123882(+)	partial			WP_000812350.1	DUF2892 domain-containing protein	51.7	48.8	49.2
MGA_835	LOCUS_08300	sequence05:5138..5341(+)	frameshift		5282,5278	WP_090887161.1	flagellar protein export ATPase FliI	80.6	12.3	48.1
MGA_836	LOCUS_08310	sequence05:5347..6456(+)	frameshift		5290	WP_003244825.1	flagellar protein export ATPase FliI	98.6	83.1	76.4
MGA_839	LOCUS_08340	sequence05:7571..8914(+)	partial			WP_003231973.1	flagellar hook-length control protein FliK	75.4	69.6	21.4
MGA_841	LOCUS_08360	sequence05:9579..9965(+)	partial			WP_010941086.1	TIGR02530 family flagellar biosynthesis protein	61.7	61.7	43.0
MGA_928	LOCUS_09230	sequence05:104409..105002(+)	partial			WP_010880658.1	TetR/AcrR family transcriptional regulator	49.2	58.7	34.9
MGA_938	LOCUS_09330	sequence05:112143..112337(-)	partial			WP_010963934.1	spore coat protein CotF	81.2	68.4	48.1
MGA_947	LOCUS_09420	sequence05:118575..119066(-)	partial			WP_005811530.1	NlpC/P60 family protein	73.0	50.4	54.2
MGA_952	LOCUS_09470	sequence05:124085..124342(-)	partial			WP_012775654.1	site-specific integrase	78.8	17.6	43.3
MGA_955	LOCUS_09500	sequence05:125625..125834(+)	internal_stop_codon	125601..125603(+)		WP_003722273.1	nucleoside triphosphate pyrophosphohydrolase family protein	89.9	59.0	51.6
MGA_974	LOCUS_09690	sequence05:135865..136161(-)	partial			WP_000499699.1	hypothetical protein	62.2	23.9	54.1
MGA_1058	LOCUS_10530	sequence07:54170..54781(-)	partial			WP_011476486.1	site-specific integrase	95.6	52.0	42.8
MGA_1063	LOCUS_10580	sequence07:59285..62932(+)	partial			WP_010941907.1	multicopper oxidase	63.3	57.7	27.9
MGA_1067	LOCUS_10620	sequence07:65255..65674(+)	partial			WP_001984077.1	FixH family protein	72.7	40.5	33.7
MGA_1073	LOCUS_10680	sequence07:69581..70108(+)	partial			WP_001034616.1	FtsW/RodA/SpoVE family cell cycle protein	85.1	35.4	50.3
MGA_1082	LOCUS_10760	sequence08:1359..1838(-)	partial			WP_000716775.1	restriction endonuclease	81.1	68.8	44.6
MGA_1088	LOCUS_10820	sequence08:5009..5488(+)	partial			WP_000625088.1	terminase large subunit	91.8	26.4	59.6
MGA_1091	LOCUS_10850	sequence08:7067..7441(+)	internal_stop_codon	7439..7441(+)		WP_011072868.1	Clp protease ClpP	83.9	37.7	43.0
MGA_1093	LOCUS_10870	sequence08:9180..10124(+)	partial			WP_003246092.1	transglycosylase SLT domain-containing protein	77.1	16.3	41.9
MGA_1095	LOCUS_10890	sequence08:11286..11669(+)	frameshift		11247	WP_012258217.1	DICT sensory domain-containing protein	92.1	32.9	38.5
MGA_1096	LOCUS_10900	sequence08:11826..12449(+)	partial			WP_011861172.1	N-acetylglucosaminidase	67.6	24.7	33.5
MGA_1097	LOCUS_10910	sequence08:12994..14787(+)	partial			WP_021391917.1	glycine rich domain-containing protein	41.5	44.7	33.0
MGA_1110	LOCUS_11040	sequence08:22899..23381(+)	partial			WP_011459554.1	YitT family protein	100.0	53.5	59.4
MGA_1132	LOCUS_11260	sequence08:42734..43807(+)	partial			WP_000994077.1	PAS domain-containing sensor histidine kinase	82.4	49.1	39.0
MGA_1140	LOCUS_11340	sequence08:50896..51705(-)	partial			WP_003232560.1	RsbT co-antagonist RsbRB	53.9	52.3	34.5
MGA_1149	LOCUS_11430	sequence08:58666..60591(+)	partial			WP_010942659.1	EAL domain-containing protein	67.9	54.9	44.1
MGA_1174	LOCUS_11680	sequence08:90681..91010(+)	frameshift		90673,90658,90865,90938,90908	WP_001062858.1	NAD(P)-dependent oxidoreductase	85.3	28.8	45.2
MGA_1180	LOCUS_11740	sequence08:97266..97532(+)	frameshift,internal_stop_codon	97191..97193(+)	97514	WP_000822525.1	HAMP domain-containing sensor histidine kinase	96.6	18.4	38.8
MGA_1182	LOCUS_11760	sequence08:98078..98434(+)	frameshift		98057,98066	WP_003242997.1	YdhK family protein	89.8	51.7	67.0
MGA_1194	LOCUS_11880	sequence08:105172..105978(+)	partial			WP_010989689.1	lmo1136 family class 1 internalin	94.4	46.9	32.5
MGA_1195	LOCUS_11890	sequence08:106016..106342(+)	partial			WP_078543626.1	RNA ligase family protein	64.8	25.2	46.6
MGA_1198	LOCUS_11920	sequence08:108994..110064(+)	partial			WP_011142460.1	colanic acid biosynthesis glycosyltransferase WcaL	80.3	66.5	40.1
MGA_1203	LOCUS_11970	sequence08:114447..115154(+)	partial			WP_010993592.1	galactosyltransferase-related protein	63.8	59.6	28.6
MGA_1208	LOCUS_12020	sequence08:119201..119374(+)	internal_stop_codon	119162..119164(+),119600..119602(+),119372..119374(+)		WP_014748808.1	IS1182-like element ISEfa7 family transposase	96.5	11.1	74.5
MGA_1209	LOCUS_12030	sequence08:119375..119602(+)	frameshift,internal_stop_codon	119162..119164(+),119600..119602(+),119372..119374(+)	119803	WP_207649719.1	IS1182 family transposase	100.0	15.3	60.0
MGA_1210	LOCUS_12040	sequence08:119848..120063(+)	frameshift,internal_stop_codon	119600..119602(+)	120016,119803	WP_181746991.1	IS1182 family transposase	78.9	11.8	58.9
MGA_1211	LOCUS_12050	sequence08:120204..120431(+)	frameshift		120015	WP_181746991.1	IS1182 family transposase	93.3	14.8	70.0
MGA_1215	LOCUS_12090	sequence08:123976..124206(+)	frameshift,internal_stop_codon	123936..123938(+),123942..123944(+)	123902,123791	WP_000037430.1	ATP-dependent RNA helicase DbpA	100.0	15.8	78.9
MGA_1217	LOCUS_12110	sequence08:126210..126602(+)	frameshift		126825,126581	WP_011393297.1	site-specific integrase	93.1	30.8	38.8
MGA_1218	LOCUS_12120	sequence08:126670..126852(+)	frameshift		126825,126581	WP_013531626.1	tyrosine-type recombinase/integrase	81.7	12.2	51.0
MGA_1228	LOCUS_12220	sequence09:6912..9779(-)	partial			WP_010964395.1	carboxypeptidase regulatory-like domain-containing protein	35.0	27.6	27.0
MGA_1230	LOCUS_12240	sequence09:10508..13534(-)	partial			WP_010989427.1	class 1 internalin InlI	63.8	33.5	27.3
MGA_1232	LOCUS_12260	sequence09:15162..16922(+)	partial			WP_137908656.1	pre-peptidase C-terminal domain-containing protein	84.3	20.9	21.7
MGA_1236	LOCUS_12300	sequence09:19497..23564(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	27.7	6.2	44.0
MGA_1241	LOCUS_12350	sequence09:30139..32316(+)	partial			WP_011964266.1	DUF262 domain-containing protein	66.2	68.2	33.1
MGA_1242	LOCUS_12360	sequence09:32419..33261(-)	partial			WP_011861706.1	zinc metalloprotease Zmp1	63.6	82.3	50.8
MGA_1251	LOCUS_12450	sequence09:43705..45132(+)	partial			WP_000666870.1	zinc ribbon domain-containing protein	67.4	69.3	25.2
MGA_1253	LOCUS_12470	sequence09:46677..47399(-)	partial			WP_011861172.1	N-acetylglucosaminidase	55.8	20.4	31.3
MGA_1255	LOCUS_12490	sequence09:49870..51963(-)	partial			WP_010941142.1	EAL domain-containing protein	84.2	74.5	37.7
MGA_1260	LOCUS_12540	sequence09:56840..58669(+)	partial			WP_011021765.1	DUF2341 domain-containing protein	62.7	8.0	29.1
MGA_1262	LOCUS_12560	sequence09:60012..60887(-)	partial			WP_000944673.1	M23 family metallopeptidase	48.5	44.0	52.4
MGA_1266	LOCUS_12600	sequence09:62348..63838(+)	partial			WP_003243594.1	beta-N-acetylglucosaminidase LytD	60.1	32.2	49.7
MGA_1270	LOCUS_12640	sequence09:68406..69071(-)	frameshift		69048	WP_027363870.1	methyl-accepting chemotaxis protein	94.1	75.5	31.9
MGA_1285	LOCUS_12790	sequence09:82660..83235(-)	partial			WP_003231283.1	lysozyme family protein	88.0	74.2	53.6
MGA_1286	LOCUS_12800	sequence09:83609..85717(+)	partial			WP_012257484.1	immune inhibitor A	39.7	38.4	28.3
MGA_1287	LOCUS_12810	sequence09:85780..87561(-)	partial			WP_011948973.1	M14 family metallopeptidase	48.9	69.5	37.3
MGA_1293	LOCUS_12870	sequence09:97953..98663(-)	partial			WP_011860957.1	N-acetylmuramoyl-L-alanine amidase	87.3	69.4	49.3
MGA_1297	LOCUS_12910	sequence09:102108..102656(+)	partial			WP_011387744.1	transposase	87.4	68.1	38.1
MGA_1313	LOCUS_13070	sequence10:12471..12653(+)	frameshift		12444	WP_000624926.1	ATP synthase subunit I	98.3	46.5	62.7
MGA_1321	LOCUS_13150	sequence10:18934..19128(+)	frameshift		19360,19282,19276	WP_074555177.1	alkaline phosphatase	98.4	11.3	77.8
MGA_1322	LOCUS_13160	sequence10:19118..19339(+)	frameshift		19360,19282,19276	WP_074555177.1	alkaline phosphatase	79.5	10.1	46.6
MGA_1333	LOCUS_13270	sequence10:25527..25709(+)	frameshift		25800,25897,25691	WP_003721374.1	ABC transporter substrate-binding protein	96.7	16.2	46.6
MGA_1346	LOCUS_13400	sequence10:38938..40203(-)	partial			WP_011087420.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	99.3	61.4	37.0
MGA_1350	LOCUS_13440	sequence11:529..1374(-)	partial			WP_003114345.1	tyrosine recombinase XerC	66.5	59.4	28.1
MGA_1363	LOCUS_13570	sequence11:11095..11436(+)	frameshift		11097,11031,10982,10831	WP_122014502.1	tyrosine-type recombinase/integrase	99.1	33.8	46.0
MGA_1370	LOCUS_13640	sequence11:15065..15202(+)	partial			WP_003231000.1	hypothetical protein	91.1	69.5	61.0
MGA_1381	LOCUS_13750	sequence12:4993..5562(-)	partial			WP_003229340.1	RDD family protein	70.4	82.9	52.6
MGA_1395	LOCUS_13890	sequence12:20881..22746(-)	partial			WP_003229309.1	diguanylate cyclase	74.6	80.1	45.6
MGA_1410	LOCUS_14040	sequence12:41749..42312(-)	partial			WP_004398549.1	YtxH domain-containing protein	62.0	78.8	38.7
MGA_1415	LOCUS_14090	sequence12:47536..50679(-)	partial			WP_000888064.1	DNA translocase FtsK	81.7	63.2	48.2
MGA_1434	LOCUS_14280	sequence12:65399..65593(-)	partial			WP_003245113.1	HNH nuclease-like protein HlpB	78.1	50.0	58.0
MGA_1489	LOCUS_14810	sequence14:12760..13239(-)	partial			WP_003246313.1	YndM family protein	64.2	82.0	41.9
MGA_1492	LOCUS_14840	sequence14:15016..15351(+)	partial			WP_010886500.1	L,D-transpeptidase family protein	96.4	65.2	63.6
MGA_1496	LOCUS_14880	sequence14:17776..17967(-)	partial			WP_003233793.1	DUF3900 domain-containing protein	73.0	14.3	70.6
MGA_1513	LOCUS_15050	sequence14:31280..31579(-)	internal_stop_codon	31580..31582(-)		WP_003245161.1	glycosyl transferase	98.0	25.5	43.3
MGA_1526	LOCUS_15180	sequence14:42493..42693(-)	partial			WP_003565456.1	GNAT family N-acetyltransferase	71.2	35.6	59.6
MGA_1549	LOCUS_15410	sequence14:66335..66613(-)	internal_stop_codon	66623..66625(-)		WP_015777078.1	FAD-dependent oxidoreductase	69.6	14.3	56.2
MGA_1550	LOCUS_15420	sequence14:66623..67072(-)	internal_stop_codon	66623..66625(-)		WP_193485197.1	NAD(P)-binding domain-containing protein	99.3	31.5	43.0
MGA_1553	LOCUS_15450	sequence14:68152..68646(+)	partial			WP_012259380.1	STAS domain-containing protein	74.4	33.2	31.1
MGA_1560	LOCUS_15520	sequence14:74446..74694(+)	partial			WP_010966015.1	hypothetical protein	82.9	37.6	40.5
MGA_1564	LOCUS_15560	sequence14:77185..77766(-)	internal_stop_codon	77185..77187(-)		WP_015366535.1	aspartate aminotransferase family protein	96.9	39.2	39.9
MGA_1569	LOCUS_15610	sequence14:82271..82429(-)	partial			WP_000565709.1	DUF1835 domain-containing protein	92.3	14.4	54.2
MGA_1570	LOCUS_15620	sequence14:82657..83298(-)	frameshift		82683	WP_000565687.1	DUF1835 domain-containing protein	93.4	59.0	37.7
MGA_1577	LOCUS_15690	sequence15:1..919(+)	partial			WP_212088642.1	NADH-quinone oxidoreductase subunit C	95.7	64.5	40.1
MGA_1600	LOCUS_15920	sequence15:22745..23215(+)	partial			WP_011013556.1	Panacea domain-containing protein	74.4	79.7	41.0
MGA_1604	LOCUS_15960	sequence15:25791..29039(+)	partial			WP_011962421.1	TaqI-like C-terminal specificity domain-containing protein	64.0	67.3	36.7
MGA_1605	LOCUS_15970	sequence15:30178..30381(-)	frameshift,internal_stop_codon	30160..30162(-)	30219,29907,30135	WP_085938409.1	IS256 family transposase	89.6	16.4	38.5
MGA_1608	LOCUS_16000	sequence15:31824..33902(+)	partial			WP_003465068.1	DDE-type integrase/transposase/recombinase	64.7	77.8	30.3
MGA_1612	LOCUS_16040	sequence15:38260..38616(+)	partial			WP_003227798.1	single-stranded DNA-binding protein SsbB	74.6	77.9	63.6
MGA_1628	LOCUS_16200	sequence15:56658..57533(-)	partial			WP_000379111.1	metal-dependent hydrolase	49.5	45.1	36.4
MGA_1630	LOCUS_16220	sequence15:58498..58782(+)	frameshift		58752	WP_002286865.1	DUF421 domain-containing protein	89.4	37.8	58.3
MGA_1631	LOCUS_16230	sequence15:58752..59072(+)	frameshift		58731	WP_010964829.1	DUF421 domain-containing protein	98.1	43.4	30.5
MGA_1633	LOCUS_16250	sequence15:60831..63260(+)	partial			WP_010941142.1	EAL domain-containing protein	67.9	69.8	47.0
MGA_1652	LOCUS_16440	sequence15:79620..80384(+)	partial			WP_010943024.1	PAS domain S-box protein	50.8	17.1	31.0
MGA_1653	LOCUS_16450	sequence15:80603..82084(-)	partial			WP_003245443.1	methyl-accepting chemotaxis protein McpC	59.8	45.0	31.2
MGA_1675	LOCUS_16670	sequence15:106134..106601(+)	internal_stop_codon	106116..106118(+)		WP_001830963.1	type 1 glutamine amidotransferase domain-containing protein	61.3	44.3	38.1
MGA_1678	LOCUS_16700	sequence15:109199..109609(+)	partial			WP_235045033.1	transposase	90.4	41.3	37.4
MGA_1680	LOCUS_16720	sequence15:110937..111803(+)	partial			WP_013098386.1	Ig-like domain-containing protein	27.8	2.3	45.1
MGA_1682	LOCUS_16730	sequence16:1353..1706(-)	partial			WP_003246525.1	SprT family protein	92.3	70.7	61.1
MGA_1689	LOCUS_16800	sequence16:7928..8188(-)	internal_stop_codon	7928..7930(-)		WP_003738506.1	anti-sigma regulatory factor	100.0	63.2	77.9
MGA_1723	LOCUS_17130	sequence17:6686..7180(-)	partial			WP_011249728.1	tyrosine recombinase XerA	59.8	31.6	35.7
MGA_1736	LOCUS_17260	sequence17:20305..20460(-)	partial			WP_000518056.1	small acid-soluble spore protein O	66.7	69.4	73.5
MGA_1738	LOCUS_17280	sequence17:23814..24344(+)	partial			WP_000269072.1	redoxin domain-containing protein	75.6	71.2	56.1
MGA_1742	LOCUS_17320	sequence17:25317..27722(+)	partial			WP_000214765.1	AAA family ATPase	80.9	67.7	34.9
MGA_1748	LOCUS_17380	sequence17:30687..30833(+)	partial			WP_000838169.1	carbonic anhydrase	79.2	20.3	60.5
MGA_1749	LOCUS_17390	sequence17:30992..32488(+)	frameshift		31012,30901	WP_003244488.1	SulP family inorganic anion transporter	91.2	84.0	54.0
MGA_1772	LOCUS_17620	sequence17:54801..55193(+)	partial			WP_000395634.1	PH domain-containing protein	64.6	64.1	48.8
MGA_1784	LOCUS_17740	sequence17:67578..68099(-)	frameshift		68323	WP_117288021.1	IS3 family transposase	99.4	43.2	56.4
MGA_1796	LOCUS_17840	sequence19:7571..8968(-)	partial			WP_011181491.1	FN3 and LamG domain-containing metallophosphoesterase family protein	84.3	47.7	53.6
MGA_1798	LOCUS_17860	sequence19:9775..10026(-)	frameshift		9768,9876	WP_000528002.1	flavin monoamine oxidase family protein	54.2	9.4	60.0
MGA_1805	LOCUS_17930	sequence19:16078..19365(+)	partial			WP_001033498.1	efflux RND transporter permease subunit	69.4	73.5	68.9
MGA_1809	LOCUS_17970	sequence19:23222..23644(+)	partial			WP_011013403.1	DUF1801 domain-containing protein	87.1	56.0	48.4
MGA_1826	LOCUS_18140	sequence19:38711..39769(-)	partial			WP_037392152.1	sulfite oxidase	97.4	74.6	35.4
MGA_1827	LOCUS_18150	sequence19:40027..42297(+)	partial			WP_011267333.1	ATP-binding protein	65.9	65.0	32.8
MGA_1831	LOCUS_18190	sequence19:46472..48100(+)	partial			WP_000584284.1	PAS domain S-box protein	87.6	60.2	33.5
MGA_1833	LOCUS_18210	sequence19:49534..49866(+)	internal_stop_codon	49864..49866(+)		WP_000846461.1	DNA starvation/stationary phase protection protein	72.7	55.6	38.8
MGA_1843	LOCUS_18310	sequence19:60967..62154(+)	partial			WP_012546449.1	D-alanine--D-alanine ligase	49.9	64.8	27.8
MGA_1855	LOCUS_18430	sequence19:75540..75926(-)	partial			WP_000486625.1	sporulation protein	98.4	53.0	28.6
MGA_1858	LOCUS_18460	sequence19:77885..79999(-)	partial			WP_012257484.1	immune inhibitor A	65.6	63.2	26.2
MGA_1861	LOCUS_18480	sequence20:341..1261(-)	frameshift		355	WP_001281642.1	ISL3 family transposase	97.7	67.1	29.2
MGA_1870	LOCUS_18560	sequence21:5929..6435(-)	partial			WP_211157632.1	Ltp family lipoprotein	60.1	52.6	60.4
MGA_1871	LOCUS_18570	sequence21:6718..6987(+)	partial			WP_003594462.1	GNAT family N-acetyltransferase	95.5	64.9	47.1
MGA_1884	LOCUS_18700	sequence21:13979..14167(+)	partial			WP_122014502.1	tyrosine-type recombinase/integrase	96.8	18.3	42.6
MGA_1890	LOCUS_18760	sequence21:18527..19378(+)	partial			WP_012259380.1	STAS domain-containing protein	43.1	33.2	32.0
MGA_1896	LOCUS_18820	sequence21:26171..27091(+)	partial			WP_017140137.1	peptidoglycan -binding protein	57.2	32.2	29.0
MGA_1899	LOCUS_18850	sequence21:28745..29056(-)	partial			WP_000999077.1	bacillithiol transferase BstA	100.0	59.5	64.1
MGA_1918	LOCUS_19040	sequence21:47944..48840(-)	partial			WP_010886495.1	DNA ligase D	96.3	47.0	34.4
MGA_1920	LOCUS_19060	sequence21:49401..50738(-)	partial			WP_004399426.1	peptidase G2 autoproteolytic cleavage domain-containing protein	96.0	52.7	50.0
MGA_1926	LOCUS_19120	sequence21:55145..55537(-)	partial			WP_003229843.1	zinc-dependent alcohol dehydrogenase	80.0	27.5	64.4
MGA_1941	LOCUS_19270	sequence21:72686..73543(-)	partial			WP_011391991.1	PIG-L family deacetylase	43.5	23.4	24.7
MGA_1947	LOCUS_19330	sequence21:79187..81019(-)	partial			WP_011392274.1	ATP-grasp domain-containing protein	41.0	69.9	25.2
MGA_1976	LOCUS_19620	sequence21:114239..114733(-)	partial			WP_003815484.1	PaaI family thioesterase	67.7	72.2	32.4
MGA_1986	LOCUS_19720	sequence21:125893..126342(-)	partial			WP_001274661.1	MaoC family dehydratase N-terminal domain-containing protein	59.1	63.3	31.6
MGA_2006	LOCUS_19920	sequence21:144110..144550(-)	partial			WP_052846972.1	enoyl-CoA hydratase-related protein	100.0	56.8	49.3
MGA_2010	LOCUS_19960	sequence21:147898..148497(-)	partial			WP_013230170.1	TetR/AcrR family transcriptional regulator	76.4	65.7	28.4
MGA_2013	LOCUS_19990	sequence21:152219..153205(-)	partial			WP_011181491.1	FN3 and LamG domain-containing metallophosphoesterase family protein	100.0	38.2	37.3
MGA_2041	LOCUS_20270	sequence21:184158..184649(-)	partial			WP_004550412.1	flavin reductase family protein	89.6	45.9	42.5
MGA_2052	LOCUS_20380	sequence21:196152..196895(+)	partial			WP_011861655.1	cell wall-binding protein Cwp22	66.8	25.3	55.2
MGA_2070	LOCUS_20560	sequence21:215731..216003(-)	partial			WP_000354127.1	phage holin	98.9	55.2	37.1
MGA_2075	LOCUS_20610	sequence21:219117..220928(-)	partial			WP_010942659.1	EAL domain-containing protein	88.9	65.5	38.5
MGA_2078	LOCUS_20640	sequence21:223127..223495(+)	partial			WP_001181837.1	CidA/LrgA family protein	86.1	71.9	37.1
MGA_2085	LOCUS_20710	sequence21:229597..230784(-)	partial			WP_167455006.1	bifunctional FO biosynthesis protein CofGH	85.3	40.1	46.1
MGA_2097	LOCUS_20830	sequence21:245757..246443(-)	partial			WP_062172213.1	LicD family protein	72.8	68.1	31.5
MGA_2109	LOCUS_20950	sequence21:258953..259135(-)	partial			WP_148335055.1	IS3 family transposase	100.0	18.3	66.7
MGA_2152	LOCUS_21380	sequence21:300373..302814(-)	partial			WP_000847511.1	S-layer homology domain-containing protein	21.4	26.2	37.1
MGA_2158	LOCUS_21440	sequence21:308210..309256(+)	partial			WP_003242502.1	potassium channel protein KbfO	63.8	65.2	29.1
MGA_2166	LOCUS_21520	sequence21:315405..315812(-)	frameshift,internal_stop_codon	315403..315405(-)	315351,315813,315903	WP_000850703.1	carbon-nitrogen hydrolase family protein	94.1	44.5	47.0
MGA_2168	LOCUS_21540	sequence21:316671..317126(+)	frameshift		316684	WP_011268747.1	GTP-binding protein	60.9	27.8	47.3
MGA_2176	LOCUS_21620	sequence21:326510..326836(-)	internal_stop_codon	326963..326965(-)		WP_003972568.1	hydrolase	93.5	36.1	52.9
MGA_2177	LOCUS_21630	sequence21:326963..327133(-)	frameshift,internal_stop_codon	327149..327151(-),326963..326965(-)	327218	WP_084641929.1	nitrilase-related carbon-nitrogen hydrolase	96.4	17.2	64.8
MGA_2238	LOCUS_22240	sequence21:392265..392669(-)	partial			WP_011023936.1	Zn-ribbon domain-containing OB-fold protein	53.7	56.1	35.1
MGA_2257	LOCUS_22430	sequence21:412997..413557(-)	partial			WP_011476379.1	NAD(P)H-dependent oxidoreductase	59.1	58.8	37.3
MGA_2265	LOCUS_22510	sequence21:423444..423644(-)	frameshift		423673,423469	WP_011729714.1	enoyl-CoA hydratase-related protein	86.4	21.8	64.9
MGA_2266	LOCUS_22520	sequence21:423668..423985(-)	frameshift		423673,423463	WP_000667365.1	enoyl-CoA hydratase	99.0	39.9	36.4
MGA_2275	LOCUS_22610	sequence21:435477..435716(-)	partial			WP_003245116.1	GNAT family protein	93.7	40.9	71.6
MGA_2314	LOCUS_23000	sequence21:479905..480231(-)	frameshift		480305,480011	WP_011089722.1	NAD(P)/FAD-dependent oxidoreductase	65.7	12.7	59.2
MGA_2315	LOCUS_23010	sequence21:480228..480602(-)	frameshift		480011,480302	WP_011728756.1	NAD(P)/FAD-dependent oxidoreductase	43.5	9.9	59.3
MGA_2316	LOCUS_23020	sequence21:480710..481273(-)	internal_stop_codon	481373..481375(-)		WP_010966717.1	DsbA family oxidoreductase	97.9	79.4	43.7
MGA_2322	LOCUS_23080	sequence21:486160..486837(-)	partial			WP_001079707.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	95.1	46.6	75.2
MGA_2323	LOCUS_23090	sequence21:487223..488044(+)	partial			WP_012259297.1	HAMP domain-containing protein	45.1	35.0	29.3
MGA_2324	LOCUS_23100	sequence21:488414..489310(+)	partial			WP_004398754.1	RsbT co-antagonist protein RsbRD	70.8	76.6	34.7
MGA_2331	LOCUS_23170	sequence21:493834..495519(-)	partial			WP_011461506.1	methyl-accepting chemotaxis protein	70.1	68.3	37.6
MGA_2335	LOCUS_23210	sequence21:497839..498333(-)	partial			WP_004398771.1	bifunctional GNAT family N-acetyltransferase/GrpB family protein	93.3	44.6	56.9
MGA_2340	LOCUS_23260	sequence21:503194..503757(-)	partial			WP_003242674.1	chromosomal replication initiator protein DnaA	44.9	19.1	41.2
MGA_2341	LOCUS_23270	sequence21:503810..504583(-)	partial			WP_002002352.1	sporulation sensor histidine kinase KinB	91.4	59.0	37.4
MGA_2342	LOCUS_23280	sequence21:505641..506645(-)	partial			WP_004399040.1	SH3 domain-containing protein	92.2	66.2	32.4
MGA_2352	LOCUS_23380	sequence21:519896..520378(-)	partial			WP_010974487.1	flavin reductase	98.8	48.9	45.6
MGA_2353	LOCUS_23390	sequence21:520486..520791(-)	frameshift		520835	WP_003229393.1	RNA-binding riboflavin kinase RibR	79.2	35.2	42.0
MGA_2354	LOCUS_23400	sequence21:520827..521201(-)	frameshift		520835	WP_003229393.1	RNA-binding riboflavin kinase RibR	96.0	50.4	46.2
MGA_2361	LOCUS_23470	sequence21:527469..530303(+)	partial			WP_076003404.1	LuxR C-terminal-related transcriptional regulator	43.8	46.3	28.0
MGA_2371	LOCUS_23570	sequence21:541725..544442(-)	partial			WP_011459236.1	DUF3578 domain-containing protein	43.2	46.0	45.1
MGA_2382	LOCUS_23680	sequence21:556733..558250(-)	partial			WP_000273909.1	AAA family ATPase	64.6	56.7	44.3
MGA_2388	LOCUS_23740	sequence21:563719..564000(-)	frameshift		564010	WP_003226923.1	replicative DNA helicase	100.0	20.5	67.7
MGA_2389	LOCUS_23750	sequence21:563909..564187(-)	frameshift		564249,564009	WP_000027355.1	replicative DNA helicase	66.3	14.0	57.4
MGA_2390	LOCUS_23760	sequence21:564199..564603(-)	frameshift		564249,564009	WP_000027306.1	replicative DNA helicase	76.1	24.0	48.5
MGA_2399	LOCUS_23850	sequence21:575111..576334(+)	partial			WP_015705510.1	putative FMN-dependent luciferase-like monooxygenase	33.7	37.4	30.7
MGA_2401	LOCUS_23870	sequence21:577442..577681(+)	frameshift		577654	WP_015039073.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	93.7	19.4	50.0
MGA_2404	LOCUS_23900	sequence21:578345..578764(+)	frameshift		578728	WP_011476379.1	NAD(P)H-dependent oxidoreductase	95.0	70.1	42.4
MGA_2406	LOCUS_23920	sequence21:578973..579404(+)	partial			WP_000766711.1	bifunctional riboflavin kinase/FAD synthetase	94.4	42.7	45.7
MGA_2409	LOCUS_23950	sequence21:580763..581332(+)	partial			WP_011459074.1	NUDIX domain-containing protein	78.3	74.4	48.0
MGA_2412	LOCUS_23980	sequence21:583362..583991(-)	partial			WP_011388726.1	molybdopterin-binding/glycosyltransferase family 2 protein	90.0	35.0	34.7
MGA_2416	LOCUS_24020	sequence21:586688..587299(-)	partial			WP_011023254.1	flavin reductase family protein	74.9	75.0	32.2
MGA_2436	LOCUS_24220	sequence21:607727..609334(+)	partial			WP_005816048.1	sigma-54-dependent Fis family transcriptional regulator	65.4	53.3	42.0
MGA_2446	LOCUS_24320	sequence21:620167..623175(-)	partial			WP_011105092.1	EAL domain-containing protein	68.4	54.5	36.6
MGA_2456	LOCUS_24420	sequence21:634999..635220(+)	frameshift		635193	WP_116631520.1	IS1595 family transposase	87.7	19.9	45.7
MGA_2457	LOCUS_24430	sequence21:635334..635639(+)	frameshift		635202	WP_012775606.1	IS1595-like element ISSsu9 family transposase	98.0	27.0	34.3
MGA_2477	LOCUS_24630	sequence21:657441..657941(-)	partial			WP_005458336.1	YkvA family protein	59.0	83.1	32.0
MGA_2482	LOCUS_24680	sequence21:662131..662634(-)	partial			WP_011030124.1	GNAT family N-acetyltransferase	68.3	68.5	40.8
MGA_2485	LOCUS_24710	sequence21:665809..666195(-)	partial			WP_000907369.1	chemotaxis protein CheW	78.9	9.4	36.6
MGA_2540	LOCUS_25260	sequence21:727495..728232(-)	partial			WP_001233744.1	polysaccharide deacetylase family protein	92.7	63.1	52.4
MGA_2542	LOCUS_25280	sequence21:729492..729644(-)	frameshift,internal_stop_codon	729710..729712(-)	729784,729881	WP_003233473.1	phosphomethylpyrimidine synthase ThiC	100.0	8.5	60.0
MGA_2543	LOCUS_25290	sequence21:729617..729937(-)	frameshift,internal_stop_codon	729709..729711(-)	729880,729988,729783	WP_005465061.1	phosphomethylpyrimidine synthase ThiC	45.3	7.1	52.1
MGA_2544	LOCUS_25300	sequence21:729938..730624(-)	frameshift,internal_stop_codon	729709..729711(-)	729880,729988,729789,730694	WP_000814482.1	phosphomethylpyrimidine synthase ThiC	94.7	36.9	86.6
MGA_2545	LOCUS_25310	sequence21:730557..731273(-)	frameshift		730694	WP_003233473.1	phosphomethylpyrimidine synthase ThiC	82.4	32.7	69.4
MGA_2572	LOCUS_25580	sequence21:757917..758081(-)	frameshift		757753,757915,757940,757798	WP_003809248.1	VOC family protein	75.9	29.9	58.5
MGA_2576	LOCUS_25620	sequence21:761379..762041(+)	partial			WP_003232504.1	sporulation two-component system sensor histidine kinase KinE	95.9	29.1	37.4
MGA_2587	LOCUS_25730	sequence21:777844..778140(-)	partial			WP_007329772.1	Dabb family protein	96.9	73.3	35.4
MGA_2592	LOCUS_25780	sequence21:782754..783008(-)	partial			WP_005165225.1	MmcQ/YjbR family DNA-binding protein	92.9	66.7	46.2
MGA_2612	LOCUS_25980	sequence21:806304..807176(-)	partial			WP_003245514.1	bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein	95.9	54.2	45.0
MGA_2626	LOCUS_26120	sequence21:820720..821082(-)	frameshift,internal_stop_codon	821094..821096(-)	821249	WP_003400106.1	methionine gamma-lyase	100.0	30.8	46.8
MGA_2627	LOCUS_26130	sequence21:821214..821381(-)	frameshift,internal_stop_codon	821433..821435(-),821094..821096(-)	821249	WP_004434058.1	PLP-dependent transferase	80.0	11.3	68.2
MGA_2628	LOCUS_26140	sequence21:821433..821792(-)	frameshift,internal_stop_codon	821823..821825(-),821433..821435(-)	821249	WP_002411310.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	98.3	28.6	51.3
MGA_2652	LOCUS_26380	sequence21:839027..839761(-)	partial			WP_009931622.1	SGNH/GDSL hydrolase family protein	82.4	73.3	47.3
MGA_2655	LOCUS_26410	sequence21:842736..844892(-)	partial			WP_000584284.1	PAS domain S-box protein	68.0	62.4	32.7
MGA_2672	LOCUS_26580	sequence21:860472..861023(-)	partial			WP_000172852.1	CalY family protein	57.9	51.3	39.6
MGA_2678	LOCUS_26640	sequence21:864730..866319(+)	partial			WP_012545054.1	HD domain-containing protein	41.6	60.1	44.6
MGA_2702	LOCUS_26880	sequence21:889942..890718(-)	partial			WP_011987059.1	polysaccharide deacetylase family protein	79.1	68.4	46.3
MGA_2730	LOCUS_27160	sequence21:919235..919987(-)	partial			WP_000747561.1	CAP domain-containing protein	55.6	51.5	75.5
MGA_2758	LOCUS_27440	sequence21:942546..943232(-)	frameshift		942379,942581	WP_000938071.1	LD-carboxypeptidase	96.1	66.8	57.5
MGA_2765	LOCUS_27510	sequence21:948608..949357(+)	partial			WP_012257289.1	DUF4397 domain-containing protein	70.7	67.9	32.6
MGA_2793	LOCUS_27790	sequence21:975842..977386(+)	partial			WP_012257792.1	LuxR C-terminal-related transcriptional regulator	17.1	10.0	34.8
MGA_2796	LOCUS_27820	sequence21:979953..980441(-)	partial			WP_011122652.1	aldehyde dehydrogenase family protein	88.9	29.4	50.7
MGA_2798	LOCUS_27840	sequence21:982843..983544(-)	partial			WP_000947707.1	NO-inducible flavohemoprotein	95.7	55.5	50.7
MGA_2799	LOCUS_27850	sequence21:983489..983947(+)	partial			WP_003245378.1	nitric oxide-sensing transcriptional repressor NsrR	71.1	74.0	64.8
MGA_2801	LOCUS_27870	sequence21:984096..985094(-)	partial			WP_010966912.1	HD-GYP domain-containing protein	67.2	62.8	40.8
MGA_2824	LOCUS_28100	sequence21:1003946..1004974(-)	frameshift		1004963	WP_003230718.1	ATP-dependent DNA helicase	99.1	52.9	52.3
MGA_2825	LOCUS_28110	sequence21:1004943..1005860(-)	frameshift		1004963	WP_000493712.1	ATP-dependent DNA helicase	96.7	45.7	66.4
MGA_2830	LOCUS_28160	sequence21:1010019..1010564(-)	partial			WP_010886551.1	spore coat protein CotD	19.9	48.0	61.1
MGA_2834	LOCUS_28200	sequence21:1015931..1016398(+)	partial			WP_010880818.1	Hsp20/alpha crystallin family protein	65.2	70.8	34.6
MGA_2915	LOCUS_29010	sequence21:1089246..1089740(-)	frameshift		1089425	WP_004399159.1	riboflavin transporter FmnP	63.4	54.7	64.4
MGA_2992	LOCUS_29780	sequence21:1168892..1169197(-)	frameshift,internal_stop_codon	1169304..1169306(-)	1169346,1168898,1169300,1168774,1168696,1169198	WP_000764677.1	phosphate butyryltransferase	98.0	34.4	66.0
MGA_3024	LOCUS_30100	sequence21:1199996..1200262(+)	partial			WP_003226367.1	SA1362 family protein	96.6	71.0	43.0
MGA_3029	LOCUS_30150	sequence21:1204257..1204763(+)	frameshift		1204697	WP_163262052.1	IS3 family transposase	98.8	37.7	48.2
MGA_3030	LOCUS_30160	sequence21:1205152..1205601(+)	frameshift		1205083	WP_085959128.1	IS3 family transposase	100.0	32.8	72.5
MGA_3031	LOCUS_30170	sequence21:1205669..1208227(-)	partial			WP_011391006.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	48.8	51.4	36.0
MGA_3090	LOCUS_30760	sequence21:1259158..1259775(+)	partial			WP_003246095.1	YqfQ family protein	59.0	46.2	39.2
MGA_3136	LOCUS_31220	sequence21:1305204..1306091(-)	partial			WP_001157831.1	DNA internalization-related competence protein ComEC/Rec2	89.8	34.3	45.7
MGA_3157	LOCUS_31430	sequence21:1322190..1322405(-)	frameshift		1322580,1322508	WP_000536320.1	class I SAM-dependent methyltransferase	98.6	33.0	48.6
MGA_3185	LOCUS_31710	sequence21:1350397..1351911(-)	partial			WP_012868996.1	glycosyl hydrolase family 18 protein	56.7	59.3	40.6
MGA_3204	LOCUS_31900	sequence21:1373294..1373698(-)	internal_stop_codon	1373294..1373296(-)		WP_003229745.1	adenine phosphoribosyltransferase	100.0	78.8	86.6
MGA_3206	LOCUS_31920	sequence21:1376113..1376427(-)	partial			WP_003723530.1	lipopolysaccharide assembly protein LapA domain-containing protein	77.9	71.1	49.4
MGA_3225	LOCUS_32110	sequence21:1392098..1392409(-)	partial			WP_000025295.1	quinolinate synthase NadA	97.1	27.2	65.0
MGA_3227	LOCUS_32130	sequence21:1393123..1393299(+)	frameshift		1392890,1393070	WP_000812272.1	transcription repressor NadR	91.4	29.4	60.4
MGA_3239	LOCUS_32250	sequence21:1402399..1405197(-)	partial			WP_012583115.1	ATP-binding protein	53.9	62.2	31.3
MGA_3240	LOCUS_32260	sequence21:1405253..1405624(-)	partial			WP_011837367.1	response regulator transcription factor	95.9	49.6	43.2
MGA_3244	LOCUS_32300	sequence21:1411320..1412939(-)	partial			WP_012257821.1	response regulator	82.4	47.3	29.4
MGA_3266	LOCUS_32520	sequence21:1435297..1437018(-)	partial			WP_010942515.1	sensor domain-containing diguanylate cyclase	40.7	63.9	33.5
MGA_3268	LOCUS_32540	sequence21:1438552..1439466(+)	partial			WP_011021379.1	RimK family alpha-L-glutamate ligase	72.4	71.8	35.8
MGA_3295	LOCUS_32810	sequence21:1473695..1473886(-)	frameshift,internal_stop_codon	1473938..1473940(-)	1473703	WP_000762140.1	peptidase E	96.8	26.3	50.8
MGA_3331	LOCUS_33170	sequence21:1510106..1510675(-)	partial			WP_001309538.1	TVP38/TMEM64 family protein	76.7	63.6	25.7
MGA_3332	LOCUS_33180	sequence21:1510749..1511012(-)	partial			WP_221875345.1	DUF1294 domain-containing protein	74.7	74.7	53.8
MGA_3350	LOCUS_33360	sequence21:1530190..1530426(-)	frameshift,internal_stop_codon	1530443..1530445(-)	1530433	WP_001065226.1	two-component system response regulator PhoP	100.0	32.6	88.5
MGA_3351	LOCUS_33370	sequence21:1530443..1530910(-)	frameshift		1530451	WP_003229442.1	two-component system response regulator PhoP	100.0	64.6	72.3
MGA_3372	LOCUS_33580	sequence21:1553615..1554001(-)	frameshift,internal_stop_codon	1554143..1554145(-),1554131..1554133(-)	1553617	WP_000237656.1	alpha/beta fold hydrolase	96.9	50.8	49.6
MGA_3404	LOCUS_33890	sequence22:13339..13536(-)	partial			WP_010930847.1	PLP-dependent aminotransferase family protein	87.7	11.1	50.9
MGA_3409	LOCUS_33940	sequence22:16052..16363(-)	partial			WP_000675556.1	sigma-70 family RNA polymerase sigma factor	96.1	51.6	57.6
MGA_3423	LOCUS_34080	sequence22:29216..29896(+)	partial			WP_010886480.1	transglycosylase SLT domain-containing protein	53.1	66.3	66.7
MGA_3433	LOCUS_34180	sequence22:40381..41586(-)	partial			WP_124797038.1	putative glycoside hydrolase	81.0	69.0	38.0
MGA_3465	LOCUS_34490	sequence23:1111..1449(-)	frameshift		986,932,1116	WP_141741171.1	IS3 family transposase	99.1	23.5	40.5
MGA_3466	LOCUS_34500	sequence23:1537..2118(-)	partial			WP_000841777.1	DMT family transporter	88.1	57.8	42.9
MGA_3474	LOCUS_34580	sequence23:10847..11587(-)	partial			WP_001023185.1	GGDEF domain-containing protein	71.1	40.9	44.1
MGA_3481	LOCUS_34650	sequence23:17093..19354(-)	partial			WP_011267333.1	ATP-binding protein	65.7	65.7	32.5
MGA_3499	LOCUS_34830	sequence23:40387..41640(-)	partial			WP_011461506.1	methyl-accepting chemotaxis protein	84.4	61.1	37.8
MGA_3500	LOCUS_34840	sequence23:42004..42309(-)	frameshift,internal_stop_codon	42002..42004(-)	42304,42259,42356	WP_003244819.1	serine/threonine exchanger	84.2	19.4	56.5
MGA_3520	LOCUS_35040	sequence23:61373..61588(+)	partial			WP_004399435.1	DUF817 domain-containing protein	85.9	23.1	67.2
MGA_3527	LOCUS_35110	sequence23:67320..69161(-)	partial			WP_012584100.1	diguanylate cyclase	67.7	38.7	38.3
MGA_3560	LOCUS_35440	sequence23:93933..94169(+)	partial			WP_010886606.1	NifU family protein	83.3	58.6	92.3
MGA_3564	LOCUS_35480	sequence23:97984..98901(-)	partial			WP_011038889.1	hypothetical protein	59.0	77.9	33.0
MGA_3629	LOCUS_36130	sequence23:162513..164075(+)	partial			WP_003232504.1	sporulation two-component system sensor histidine kinase KinE	45.2	32.0	52.5
MGA_3665	LOCUS_36490	sequence23:207343..208113(+)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	75.0	70.3	49.5
MGA_3692	LOCUS_36760	sequence23:234944..235576(+)	partial			WP_012047728.1	class D sortase	66.2	68.1	56.1
MGA_3699	LOCUS_36830	sequence23:240214..240762(+)	partial			WP_011125196.1	N-acetylmuramoyl-L-alanine amidase	96.2	47.4	38.6
MGA_3722	LOCUS_37060	sequence23:267254..267706(-)	partial			WP_004082082.1	chemotaxis protein CheX	60.0	60.6	31.9
MGA_3748	LOCUS_37320	sequence23:292915..293121(-)	partial			WP_041272513.1	flagellin	58.8	10.1	75.0
MGA_3750	LOCUS_37340	sequence23:294680..296524(-)	partial			WP_041272513.1	flagellin	22.3	34.7	79.6
MGA_3751	LOCUS_37350	sequence23:296607..298532(-)	partial			WP_041272513.1	flagellin	22.0	35.7	79.4
MGA_3760	LOCUS_37440	sequence23:304356..304733(-)	partial			WP_003722644.1	ComF family protein	96.0	52.8	44.2
MGA_3775	LOCUS_37590	sequence23:320757..321938(-)	partial			WP_010989657.1	CDP-glycerol glycerophosphotransferase family protein	91.6	50.6	39.6
MGA_3782	LOCUS_37660	sequence23:330384..332393(-)	partial			WP_000680977.1	S-layer homology domain-containing protein	43.2	62.5	27.3
MGA_3789	LOCUS_37730	sequence23:341871..342362(+)	partial			WP_003244816.1	peptidoglycan endopeptidase LytE	85.9	41.0	50.7
MGA_3799	LOCUS_37830	sequence23:352547..353200(+)	partial			WP_004399265.1	D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS	52.5	26.8	61.4
MGA_3841	LOCUS_38250	sequence24:42730..43326(-)	frameshift		42738	WP_000648703.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	99.0	78.4	58.7
MGA_3898	LOCUS_38820	sequence24:106475..106888(-)	internal_stop_codon	106475..106477(-)		WP_010969826.1	crotonase/enoyl-CoA hydratase family protein	95.6	50.6	42.5
MGA_3951	LOCUS_39350	sequence24:153072..154034(-)	partial			WP_000291199.1	polysaccharide deacetylase family protein	58.1	68.4	33.7
MGA_3983	LOCUS_39670	sequence24:186432..187139(-)	partial			WP_000420370.1	sporulation sensor histidine kinase KinB	97.0	53.8	48.7
MGA_4025	LOCUS_40090	sequence24:232563..233726(-)	partial			WP_003244727.1	anti-sigma-I factor RsgI	69.3	73.2	32.0
MGA_4034	LOCUS_40180	sequence24:241242..241676(-)	partial			WP_003974078.1	sigma-70 family RNA polymerase sigma factor	59.7	25.4	37.9
MGA_4038	LOCUS_40220	sequence24:245516..246043(-)	partial			WP_010965795.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	69.1	62.1	33.9
MGA_4044	LOCUS_40280	sequence24:250937..252046(-)	frameshift		251014	WP_226986777.1	MFS transporter	80.2	69.3	29.7
MGA_4058	LOCUS_40420	sequence25:12228..15032(-)	partial			WP_003244105.1	type VII secretion protein EsaA	72.7	61.2	29.6
MGA_4075	LOCUS_40590	sequence25:37901..38287(-)	frameshift,internal_stop_codon	38287..38289(-)	38559	WP_001195924.1	decarboxylating 6-phosphogluconate dehydrogenase	98.4	42.4	89.7
MGA_4076	LOCUS_40600	sequence25:38288..38533(-)	frameshift,internal_stop_codon	38287..38289(-)	38559	WP_001195924.1	decarboxylating 6-phosphogluconate dehydrogenase	98.8	26.9	82.5
MGA_4077	LOCUS_40610	sequence25:38548..38796(-)	frameshift,internal_stop_codon	38287..38289(-)	38559	WP_001195906.1	decarboxylating 6-phosphogluconate dehydrogenase	95.1	26.3	67.9
MGA_4090	LOCUS_40740	sequence25:50888..51166(+)	frameshift		51259,51133	WP_003118743.1	AraC family transcriptional regulator CmrA	81.5	22.8	50.7
MGA_4105	LOCUS_40880	sequence26:3015..3746(-)	partial			WP_011476317.1	ABC transporter permease	72.8	74.8	29.9
MGA_4124	LOCUS_41070	sequence26:19040..19525(+)	internal_stop_codon	19523..19525(+)		WP_003731865.1	GNAT family N-acetyltransferase	98.8	54.6	47.2
MGA_4129	LOCUS_41120	sequence26:25651..26028(+)	frameshift		25634	WP_001049726.1	GNAT family protein	95.2	74.4	71.4
MGA_4134	LOCUS_41170	sequence26:31741..32313(-)	partial			WP_010963767.1	DUF2087 domain-containing protein	88.9	67.9	30.3
MGA_4142	LOCUS_41250	sequence26:39072..39695(+)	partial			WP_011090806.1	3'-5' exonuclease	91.3	61.2	31.9
MGA_4143	LOCUS_41260	sequence26:39749..39976(-)	frameshift,internal_stop_codon	40166..40168(-)	39985,40114	WP_226990853.1	flavodoxin family protein	89.3	31.3	55.2
MGA_4157	LOCUS_41400	sequence26:56518..57276(+)	internal_stop_codon	57513..57515(+)		WP_002485759.1	heavy metal translocating P-type ATPase	93.3	29.2	68.9
MGA_4158	LOCUS_41410	sequence26:57273..57515(+)	internal_stop_codon	57513..57515(+)		WP_002485759.1	heavy metal translocating P-type ATPase	100.0	10.0	73.8
MGA_4186	LOCUS_41690	sequence26:81554..82126(+)	partial			WP_003975467.1	TetR family transcriptional regulator	33.7	32.8	39.1
MGA_4202	LOCUS_41850	sequence26:97093..97665(-)	partial			WP_003226754.1	ubiquitin-like domain-containing protein	48.9	21.3	71.0
MGA_4257	LOCUS_42400	sequence26:156941..157198(+)	frameshift		157186	WP_003893442.1	CoA transferase	90.6	21.0	42.9
MGA_4258	LOCUS_42410	sequence26:157200..157946(+)	frameshift		157760,157685,157192,157913,157565	WP_003129868.1	CaiB/BaiF CoA-transferase family protein	94.8	58.4	28.9
MGA_4264	LOCUS_42470	sequence26:163586..163780(+)	frameshift		163859,163796,164075,163772,163535	WP_000390637.1	acetyl-CoA C-acetyltransferase	85.9	14.0	58.2
MGA_4265	LOCUS_42480	sequence26:163856..164158(+)	frameshift,internal_stop_codon	163859..163861(+)	163867,163762,163795,164071	WP_011392774.1	thiolase family protein	68.0	23.4	51.1
MGA_4272	LOCUS_42550	sequence26:172194..173993(+)	partial			WP_011267928.1	sigma-54-dependent Fis family transcriptional regulator	31.6	32.4	34.0
MGA_4274	LOCUS_42570	sequence26:176071..176616(+)	partial			WP_010887651.1	riboflavin biosynthesis protein RibF	89.0	54.2	44.1
MGA_4278	LOCUS_42610	sequence26:178966..179805(+)	partial			WP_000787928.1	alpha/beta fold hydrolase	59.9	51.1	34.3
MGA_4281	LOCUS_42640	sequence26:181275..181916(+)	frameshift		181239	WP_027479724.1	3-oxoacid CoA-transferase subunit B	93.0	44.7	57.5
MGA_4285	LOCUS_42680	sequence26:185721..186338(-)	partial			WP_001854799.1	polysaccharide deacetylase family protein	91.7	38.7	40.2
MGA_4289	LOCUS_42720	sequence26:188896..189105(-)	partial			WP_000793731.1	metallophosphoesterase	69.6	13.0	58.3
MGA_4290	LOCUS_42730	sequence26:189282..189617(+)	frameshift		189640	WP_014206889.1	NAD(P)-dependent alcohol dehydrogenase	75.7	22.6	44.0
MGA_4296	LOCUS_42790	sequence26:191967..193640(+)	partial			WP_015040466.1	acyl-CoA dehydrogenase family protein	81.3	73.2	34.5
MGA_4300	LOCUS_42830	sequence26:197060..197968(+)	partial			WP_012582489.1	HD domain-containing protein	57.6	38.5	51.4
MGA_4332	LOCUS_43150	sequence26:227709..228128(+)	partial			WP_000964343.1	potassium channel family protein	74.1	76.9	48.5