{ "type": "genome", "identifier": "GCF_003429285.1", "organism": "Salinimonas sediminis", "title": "Salinimonas sediminis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shanghai Ocean University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003429285.1", "bioproject": "PRJNA224116", "biosample": "SAMN09858433", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2303538", "species_taxid": "2303538", "organism_name": "Salinimonas sediminis", "infraspecific_name": "strain=N102", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/28", "asm_name": "ASM342928v1", "asm_submitter": "Shanghai Ocean University", "gbrs_paired_asm": "GCA_003429285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/429/285/GCF_003429285.1_ASM342928v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4440293", "genome_size_ungapped": "4440293", "gc_percent": "48.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003429285.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "3866", "protein_coding_gene_count": "3735", "non_coding_gene_count": "88", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-28", "dateModified": "2018-08-28", "datePublished": "2018-08-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Salinimonas sediminis" ], "sample_taxid": [ "2303538" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: New 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"organism_name": "Alteromonas oceani", "strain": "strain=S35", "accession": "GCA_003731635.1", "taxid": 2071609, "species_taxid": 2071609, "relation_to_type": "type", "validated": true, "ani": 79.8647, "matched_fragments": 164, "total_fragments": 1480, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas alba", "strain": "strain=190", "accession": "GCA_002993365.1", "taxid": 2079529, "species_taxid": 2079529, "relation_to_type": "type", "validated": true, "ani": 79.6286, "matched_fragments": 175, "total_fragments": 1480, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinimonas lutimaris", "strain": "strain=DPSR-4", "accession": "GCA_005222225.1", "taxid": 914153, "species_taxid": 914153, "relation_to_type": "type", "validated": true, "ani": 79.3969, "matched_fragments": 355, "total_fragments": 1480, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteromonas naphthalenivorans", "strain": "strain=SN2", 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