# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00020	sequence001:1070..1591(+)	frameshift		1564	WP_083452801.1	non-ribosomal peptide synthetase	95.4	4.8	58.4
MGA_4	LOCUS_00030	sequence001:1575..2165(+)	frameshift		1567,1558,2087	WP_011267789.1	non-ribosomal peptide synthetase	79.6	2.1	47.4
MGA_8	LOCUS_00060	sequence002:823..1725(-)	partial			WP_010950832.1	PPE family protein	78.3	66.0	34.5
MGA_13	LOCUS_00110	sequence002:4891..5766(+)	partial			WP_010950935.1	glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX	42.3	38.4	44.7
MGA_14	LOCUS_00120	sequence002:6175..6909(+)	partial			WP_015943650.1	hypothetical protein	31.1	70.4	47.4
MGA_18	LOCUS_00160	sequence002:9566..10447(-)	partial			WP_003899159.1	hypothetical protein	56.7	51.4	47.0
MGA_20	LOCUS_00180	sequence002:10888..13662(-)	partial			WP_010886125.1	PE domain-containing protein	33.3	30.3	52.1
MGA_21	LOCUS_00190	sequence002:13901..14176(+)	partial			WP_003419334.1	PPE family protein	96.7	15.2	52.3
MGA_42	LOCUS_00400	sequence002:37864..38337(-)	partial			WP_003408366.1	TetR family transcriptional regulator	97.5	73.9	72.5
MGA_43	LOCUS_00410	sequence002:39234..42350(-)	partial			WP_043790679.1	NB-ARC domain-containing protein	65.2	76.4	34.7
MGA_55	LOCUS_00480	sequence005:9367..11718(-)	partial			WP_099318959.1	PE family protein	16.0	27.3	52.0
MGA_57	LOCUS_00500	sequence005:13548..13673(-)	partial			WP_003411056.1	methionine synthase	100.0	3.4	92.7
MGA_58	LOCUS_00510	sequence005:13670..13984(-)	partial			WP_003411056.1	methionine synthase	55.8	4.9	93.1
MGA_69	LOCUS_00620	sequence005:24397..24699(-)	partial			WP_003411107.1	hypothetical protein	99.0	73.7	80.2
MGA_78	LOCUS_00700	sequence005:32617..32970(-)	internal_stop_codon	33121..33123(-)		WP_005110629.1	plasmid replication initiator protein	99.1	23.2	56.9
MGA_80	LOCUS_00720	sequence005:33121..34215(-)	internal_stop_codon	33121..33123(-)		WP_005110629.1	plasmid replication initiator protein	98.4	66.3	54.9
MGA_81	LOCUS_00730	sequence005:34212..34448(-)	frameshift		34450	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	96.2	17.3	62.7
MGA_82	LOCUS_00740	sequence005:34445..35212(-)	frameshift		35217,34449	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	99.6	52.8	74.8
MGA_83	LOCUS_00750	sequence005:35134..35649(-)	frameshift		35217	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	81.9	28.9	42.6
MGA_85	LOCUS_00770	sequence005:36365..36856(+)	frameshift		36835,36878	WP_005110620.1	hypothetical protein	95.1	58.6	58.3
MGA_86	LOCUS_00780	sequence005:36853..37146(+)	frameshift		36835,36878	WP_005110620.1	hypothetical protein	86.6	31.6	65.5
MGA_98	LOCUS_00900	sequence005:47736..48071(-)	frameshift		48075	WP_012296512.1	recombinase family protein	87.4	17.7	82.5
MGA_99	LOCUS_00910	sequence005:47998..48303(-)	frameshift		48075	WP_012296512.1	recombinase family protein	59.4	10.9	85.0
MGA_103	LOCUS_00950	sequence005:51210..51428(+)	frameshift		51374	WP_011727856.1	IS256 family transposase	73.6	12.3	74.1
MGA_104	LOCUS_00960	sequence005:51389..51592(+)	frameshift		51374	WP_011727856.1	IS256 family transposase	47.8	7.3	81.2
MGA_108	LOCUS_01000	sequence005:55488..56549(-)	frameshift		56554	WP_009968094.1	non-ribosomal peptide synthetase DhbF	98.3	15.1	38.8
MGA_109	LOCUS_01010	sequence005:56546..>57709(-)	frameshift		56554,56551	WP_013226861.1	non-ribosomal peptide synthetase	99.2	6.1	38.3
MGA_110	LOCUS_01020	sequence006:1..1134(+)	frameshift		1002	WP_011726917.1	non-ribosomal peptide synthetase	69.2	10.2	57.1
MGA_148	LOCUS_01380	sequence007:36931..37554(-)	frameshift		37016,37523	WP_003418263.1	IS3 family transposase	81.6	43.7	72.8
MGA_149	LOCUS_01390	sequence007:37491..37886(-)	frameshift,internal_stop_codon	37876..37878(-)	37523,37869	WP_003418263.1	IS3 family transposase	73.3	24.8	66.7
MGA_150	LOCUS_01400	sequence007:37950..38426(-)	partial			WP_085100849.1	hypothetical protein	73.4	81.2	41.0
MGA_162	LOCUS_01520	sequence007:49111..49425(-)	frameshift		49396	WP_011731328.1	glycogen debranching protein GlgX	85.6	12.3	48.3
MGA_170	LOCUS_01600	sequence007:57016..59763(+)	partial			WP_003914906.1	LuxR family transcriptional regulator	68.9	55.8	37.9
MGA_173	LOCUS_01630	sequence007:61970..62719(-)	partial			WP_011816256.1	class I SAM-dependent methyltransferase	49.8	48.8	32.8
MGA_186	LOCUS_01760	sequence007:75526..76308(+)	partial			WP_013530922.1	ribonuclease T(2)	89.2	69.6	29.5
MGA_190	LOCUS_01800	sequence007:79532..82483(-)	partial			WP_011122418.1	VIT domain-containing protein	63.7	84.3	29.2
MGA_193	LOCUS_01830	sequence007:84644..>85533(-)	partial			WP_014000186.1	PPE domain-containing protein	95.9	6.0	33.8
MGA_220	LOCUS_02090	sequence008:27138..27563(-)	partial			WP_003898701.1	IS5 family transposase	100.0	49.1	82.3
MGA_236	LOCUS_02250	sequence008:42306..46346(-)	partial			WP_010886173.1	PE family protein	8.6	16.2	54.3
MGA_243	LOCUS_02310	sequence009:2706..3158(+)	frameshift		3101	WP_010886112.1	PE family protein	65.3	16.3	56.1
MGA_256	LOCUS_02440	sequence009:17839..18438(+)	partial			WP_003905037.1	IS110 family transposase	97.5	34.0	82.0
MGA_258	LOCUS_02460	sequence009:19738..22413(+)	partial			WP_010886084.1	PE family protein	14.1	16.1	50.8
MGA_282	LOCUS_02700	sequence009:59616..62063(-)	partial			WP_010974382.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	43.2	84.5	30.7
MGA_291	LOCUS_02790	sequence009:70945..72753(+)	frameshift		72750	WP_010886116.1	PE family protein	18.4	22.6	56.8
MGA_318	LOCUS_03060	sequence009:104990..106036(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	67.0	75.9	64.4
MGA_429	LOCUS_04170	sequence009:209987..210442(-)	frameshift		210675,210495	WP_010886126.1	PPE family protein	96.7	13.9	64.4
MGA_431	LOCUS_04180	sequence009:211499..213124(-)	frameshift,internal_stop_codon	211825..211827(-),211795..211797(-)	211560,211570,211746,212020	WP_010950590.1	PPE family protein	96.1	49.1	55.2
MGA_482	LOCUS_04680	sequence009:271049..271372(-)	partial			WP_011726965.1	DUF4344 domain-containing metallopeptidase	97.2	36.5	45.2
MGA_485	LOCUS_04710	sequence009:273067..273441(-)	partial			WP_003897321.1	hypothetical protein	96.8	57.6	48.8
MGA_499	LOCUS_04850	sequence009:282714..284591(+)	partial			WP_010886091.1	PE family protein	20.2	20.8	62.7
MGA_514	LOCUS_04980	sequence010:581..1795(-)	frameshift		1779	WP_010950704.1	mycobactin non-ribosomal peptide synthetase MbtF	79.0	21.7	52.0
MGA_515	LOCUS_04990	sequence010:1714..>6888(-)	partial			WP_003900387.1	type I polyketide synthase	90.5	71.8	57.3
MGA_517	LOCUS_05000	sequence011:71..385(-)	partial			WP_085976166.1	IS3 family transposase	82.7	23.6	45.6
MGA_528	LOCUS_05110	sequence011:14064..14627(+)	partial			WP_003894961.1	alpha/beta hydrolase	82.9	50.2	48.4
MGA_532	LOCUS_05150	sequence011:17022..17675(+)	partial			WP_013225120.1	class I SAM-dependent methyltransferase	71.9	78.0	36.4
MGA_539	LOCUS_05220	sequence011:24988..25404(+)	frameshift		24985	WP_013225434.1	M15 family metallopeptidase	68.1	43.5	40.0
MGA_540	LOCUS_05230	sequence011:25497..27986(+)	partial			WP_010886108.1	PE family protein	14.8	14.3	48.0
MGA_542	LOCUS_05250	sequence011:28945..30393(-)	partial			WP_010886177.1	PE family protein	31.3	26.7	40.1
MGA_543	LOCUS_05260	sequence011:30765..32474(+)	partial			WP_003416079.1	wax ester/triacylglycerol synthase family O-acyltransferase	55.5	68.6	33.4
MGA_544	LOCUS_05270	sequence011:32508..37310(+)	partial			WP_011029283.1	hypothetical protein	70.3	64.4	37.2
MGA_549	LOCUS_05320	sequence011:46421..47593(+)	partial			WP_003899159.1	hypothetical protein	55.1	67.2	50.9
MGA_568	LOCUS_05510	sequence011:72631..73209(+)	frameshift		73083	WP_003419226.1	PPE family protein	92.2	43.8	55.1
MGA_585	LOCUS_05640	sequence014:14949..19589(+)	partial			WP_027084589.1	non-ribosomal peptide synthetase	41.7	19.5	33.8
MGA_595	LOCUS_05740	sequence014:29433..31460(-)	partial			WP_010950597.1	PE family protein	19.6	21.6	48.9
MGA_597	LOCUS_05760	sequence014:32338..33858(-)	partial			WP_003911027.1	PE family protein	23.3	26.9	58.5
MGA_603	LOCUS_05820	sequence014:41136..43610(+)	partial			WP_010886090.1	PE family protein	15.0	14.1	59.7
MGA_674	LOCUS_06530	sequence014:123038..124474(+)	partial			WP_011727115.1	hypothetical protein	68.2	59.4	38.1
MGA_684	LOCUS_06630	sequence014:133701..135296(+)	partial			WP_003911027.1	PE family protein	18.3	22.1	56.7
MGA_693	LOCUS_06720	sequence014:145673..146674(+)	partial			WP_012804460.1	ROK family protein	61.0	63.2	30.2
MGA_694	LOCUS_06730	sequence014:146671..147780(+)	partial			WP_013223306.1	glucose 1-dehydrogenase	19.2	21.7	38.2
MGA_704	LOCUS_06830	sequence014:156523..156939(+)	partial			WP_012640167.1	DUF1330 domain-containing protein	88.4	74.2	34.7
MGA_708	LOCUS_06870	sequence014:159306..160868(+)	frameshift,internal_stop_codon	159454..159456(+)	159281,159299,159191	WP_011727115.1	hypothetical protein	61.0	61.2	40.0
MGA_709	LOCUS_06880	sequence014:161024..162538(+)	frameshift		162497,162579,162455,162669,162687	WP_011727115.1	hypothetical protein	65.3	59.4	43.8
MGA_714	LOCUS_06930	sequence014:166108..167541(-)	partial			WP_003911027.1	PE family protein	24.3	26.4	53.4
MGA_715	LOCUS_06940	sequence014:167725..169155(-)	partial			WP_010886128.1	PE family protein	26.9	14.0	50.8
MGA_716	LOCUS_06950	sequence014:169547..172753(+)	partial			WP_010950544.1	PE family protein	11.4	24.8	45.9
MGA_733	LOCUS_07120	sequence014:195289..195666(-)	partial			WP_010886091.1	PE family protein	73.6	15.2	45.7
MGA_739	LOCUS_07180	sequence014:201850..209151(-)	partial			WP_122524938.1	PPE domain-containing protein	54.9	40.1	39.3
MGA_743	LOCUS_07220	sequence014:223511..226444(-)	partial			WP_010886105.1	PE family protein	19.5	27.9	42.7
MGA_779	LOCUS_07580	sequence014:263793..264125(-)	partial			WP_003900268.1	alpha/beta hydrolase	92.7	40.1	38.8
MGA_786	LOCUS_07650	sequence014:272167..273357(+)	partial			WP_015706067.1	MFS transporter	40.9	34.8	34.8
MGA_790	LOCUS_07690	sequence014:276955..278469(-)	partial			WP_011336871.1	class I SAM-dependent methyltransferase	29.6	70.8	43.6
MGA_803	LOCUS_07820	sequence014:293277..294944(+)	partial			WP_003911169.1	type I polyketide synthase	99.1	39.1	66.9
MGA_834	LOCUS_08110	sequence015:42570..43028(-)	partial			WP_003408366.1	TetR family transcriptional regulator	99.3	72.9	70.2
MGA_835	LOCUS_08120	sequence015:43195..44319(-)	partial			WP_003895205.1	ABC transporter ATP-binding protein	56.1	82.7	74.3
MGA_838	LOCUS_08150	sequence015:47169..49031(-)	partial			WP_099318959.1	PE family protein	20.6	27.7	53.1
MGA_840	LOCUS_08170	sequence015:51742..53655(-)	frameshift		51752,53108	WP_010886091.1	PE family protein	18.5	19.5	53.4
MGA_866	LOCUS_08430	sequence015:82951..>84573(-)	partial			WP_011726917.1	non-ribosomal peptide synthetase	51.9	9.6	57.9
MGA_867	LOCUS_08440	sequence016:1..4824(+)	partial			WP_041180293.1	type I polyketide synthase	94.9	72.2	61.4
MGA_868	LOCUS_08450	sequence016:4821..5219(+)	frameshift		5135	WP_010907554.1	type I polyketide synthase	68.9	4.3	65.9
MGA_877	LOCUS_08520	sequence017:8272..8571(+)	partial			WP_003420544.1	lipoprotein LpqH	99.0	61.6	80.6
MGA_883	LOCUS_08580	sequence017:12003..14408(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	19.0	27.2	49.3
MGA_885	LOCUS_08600	sequence017:15549..16067(-)	frameshift		15575	WP_010950639.1	PecA family PE domain-processing aspartic protease	88.4	27.2	52.0
MGA_894	LOCUS_08690	sequence017:23362..25551(-)	partial			WP_010950556.1	PPE family protein	42.8	42.9	49.2
MGA_902	LOCUS_08770	sequence017:33705..35507(+)	partial			WP_010886177.1	PE family protein	20.7	21.2	62.1
MGA_903	LOCUS_08780	sequence017:35628..36989(-)	partial			WP_003113577.1	alpha/beta fold hydrolase	57.2	81.2	33.7
MGA_904	LOCUS_08790	sequence017:37279..40422(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	8.7	16.3	59.3
MGA_926	LOCUS_08980	sequence019:22683..23216(+)	partial			WP_003407722.1	signal peptidase II	81.9	71.8	95.9
MGA_954	LOCUS_09260	sequence019:55952..56650(+)	partial			WP_003914321.1	DUF2567 domain-containing protein	69.8	83.9	60.5
MGA_971	LOCUS_09430	sequence019:71206..73410(-)	partial			WP_010918464.1	cyanophycinase	36.5	66.7	29.5
MGA_974	LOCUS_09460	sequence019:78541..80055(-)	partial			WP_011727267.1	serine/threonine-protein kinase	56.5	57.7	64.3
MGA_982	LOCUS_09540	sequence019:87173..89398(+)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	44.8	71.4	73.4
MGA_983	LOCUS_09550	sequence019:89462..89857(+)	partial			WP_003408004.1	TM2 domain-containing protein	76.3	68.5	86.0
MGA_1002	LOCUS_09740	sequence019:111975..112511(-)	partial			WP_010970164.1	DNA ligase D	83.7	17.3	48.0
MGA_1011	LOCUS_09830	sequence019:123860..125542(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	51.4	46.0	67.1
MGA_1025	LOCUS_09970	sequence019:141520..143469(+)	partial			WP_003420809.1	PE family protein	55.9	76.6	37.7
MGA_1026	LOCUS_09980	sequence019:143764..145434(+)	partial			WP_010950570.1	PE domain-containing protein	64.2	33.8	40.6
MGA_1027	LOCUS_09990	sequence019:145692..147536(+)	partial			WP_003420809.1	PE family protein	61.1	77.2	39.5
MGA_1032	LOCUS_10020	sequence020:462..3104(+)	frameshift		3038	WP_011030787.1	type I polyketide synthase	93.4	16.8	35.7
MGA_1033	LOCUS_10030	sequence020:3128..4114(+)	frameshift		3077	WP_011030787.1	type I polyketide synthase	74.1	4.9	33.2
MGA_1049	LOCUS_10190	sequence020:22269..23987(-)	internal_stop_codon	22269..22271(-)		WP_010950904.1	PE family protein	22.7	9.6	49.6
MGA_1057	LOCUS_10270	sequence020:32281..34020(-)	partial			WP_000615086.1	alpha/beta fold hydrolase	97.6	49.9	31.7
MGA_1058	LOCUS_10280	sequence020:34104..35402(-)	internal_stop_codon	34104..34106(-),35424..35426(-)		WP_011730278.1	MFS transporter	100.0	75.9	55.9
MGA_1059	LOCUS_10290	sequence020:35424..35639(-)	internal_stop_codon	35424..35426(-)		WP_003406326.1	MFS transporter	66.2	8.1	70.2
MGA_1076	LOCUS_10460	sequence020:59682..60074(+)	partial			WP_003899794.1	hypothetical protein	65.4	75.9	76.5
MGA_1077	LOCUS_10470	sequence020:60360..60719(+)	partial			WP_003899794.1	hypothetical protein	63.0	67.0	80.0
MGA_1097	LOCUS_10670	sequence020:82451..83050(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	42.2	40.0	46.4
MGA_1112	LOCUS_10820	sequence020:96402..97253(+)	partial			WP_010950346.1	PE family protein	99.3	47.2	38.8
MGA_1124	LOCUS_10940	sequence020:108444..113510(-)	partial			WP_002382239.1	membrane protein	26.2	46.2	22.1
MGA_1152	LOCUS_11220	sequence020:130853..131377(-)	partial			WP_014300514.1	WhiB family transcriptional regulator	42.0	74.7	51.4
MGA_1200	LOCUS_11700	sequence020:156026..156586(+)	partial			WP_003405912.1	DUF3556 domain-containing protein	88.2	28.3	63.4
MGA_1201	LOCUS_11710	sequence020:156698..156925(-)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	72.5
MGA_1211	LOCUS_11810	sequence020:174929..176080(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	57.4	54.0	29.4
MGA_1213	LOCUS_11830	sequence020:177669..178115(-)	partial			WP_005064825.1	MaoC family dehydratase	53.4	60.8	41.8
MGA_1217	LOCUS_11870	sequence020:181046..182734(+)	partial			WP_011729162.1	MDR family MFS transporter	90.0	73.5	64.1
MGA_1235	LOCUS_12050	sequence020:204753..206567(-)	partial			WP_005113275.1	PPE family protein	46.5	55.7	40.0
MGA_1240	LOCUS_12100	sequence020:212643..213413(+)	partial			WP_003407157.1	membrane protein	71.5	69.3	67.8
MGA_1267	LOCUS_12370	sequence020:240684..241313(+)	frameshift		240700	WP_011728230.1	enoyl-CoA hydratase-related protein	97.6	74.7	66.2
MGA_1272	LOCUS_12420	sequence020:245997..246776(+)	frameshift		246578	WP_011728227.1	class I adenylate-forming enzyme family protein	73.7	36.6	49.7
MGA_1273	LOCUS_12430	sequence020:246694..247524(+)	frameshift		246578	WP_011728227.1	class I adenylate-forming enzyme family protein	97.1	52.8	66.8
MGA_1294	LOCUS_12640	sequence020:269736..270236(+)	internal_stop_codon	270234..270236(+)		WP_003899112.1	CAP domain-containing protein	85.5	64.3	75.4
MGA_1307	LOCUS_12770	sequence020:283503..284513(+)	partial			WP_003899159.1	hypothetical protein	72.6	72.1	55.5
MGA_1345	LOCUS_13110	sequence024:15740..16597(+)	partial			WP_001002036.1	DNA damage-inducible protein D	38.9	40.5	51.4
MGA_1392	LOCUS_13580	sequence024:43106..44377(+)	partial			WP_063017182.1	Clp protease ClpP	63.6	54.6	47.4
MGA_1404	LOCUS_13700	sequence024:50130..53699(+)	partial			WP_010921965.1	LysM domain-containing protein	8.7	28.0	40.5
MGA_1410	LOCUS_13760	sequence024:60640..62019(+)	partial			WP_005110323.1	chitinase	63.4	64.1	57.1
MGA_1433	LOCUS_13990	sequence024:85908..87203(-)	partial			WP_011142384.1	cation:proton antiporter	95.6	54.6	37.1
MGA_1434	LOCUS_14000	sequence024:87277..87834(-)	partial			WP_010974487.1	flavin reductase	91.4	49.2	35.9
MGA_1435	LOCUS_14010	sequence024:87854..97057(-)	partial			WP_013226599.1	non-ribosomal peptide synthetase	81.3	48.8	29.3
MGA_1440	LOCUS_14060	sequence024:103702..106266(-)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	62.3	61.8	45.4
MGA_1455	LOCUS_14210	sequence024:121843..122625(+)	partial			WP_066567687.1	hypothetical protein	36.2	48.8	38.5
MGA_1470	LOCUS_14360	sequence024:139780..139992(-)	partial			WP_005110336.1	site-specific integrase	100.0	18.0	77.1
MGA_1471	LOCUS_14370	sequence024:140005..140433(-)	partial			WP_005110336.1	site-specific integrase	81.7	29.8	63.8
MGA_1474	LOCUS_14400	sequence024:142203..144254(-)	frameshift		142229,142238,142247	WP_010886173.1	PE family protein	22.3	19.7	42.8
MGA_1476	LOCUS_14410	sequence025:772..1476(-)	partial			WP_050039320.1	PadR family transcriptional regulator	61.5	76.6	76.4
MGA_1483	LOCUS_14480	sequence025:7723..8967(-)	frameshift		9043	WP_003419768.1	membrane protein	80.2	74.7	65.6
MGA_1496	LOCUS_14600	sequence025:23328..25556(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	93.3	51.8	38.9
MGA_1503	LOCUS_14670	sequence025:29352..29888(+)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	84.8	66.8	46.4
MGA_1549	LOCUS_15130	sequence025:74430..76466(-)	partial			WP_010886177.1	PE family protein	19.5	22.6	56.8
MGA_1586	LOCUS_15490	sequence025:112235..113530(+)	partial			WP_003911027.1	PE family protein	56.4	58.8	36.2
MGA_1596	LOCUS_15590	sequence025:121740..121922(+)	partial			WP_013225051.1	MarR family transcriptional regulator	95.0	59.4	64.9
MGA_1636	LOCUS_15990	sequence025:159627..160172(-)	partial			WP_003408271.1	protein disulfide oxidoreductase	74.6	74.2	57.8
MGA_1649	LOCUS_16120	sequence025:173761..174354(+)	frameshift		174348,174342	WP_099318959.1	PE family protein	59.9	25.8	62.7
MGA_1657	LOCUS_16160	sequence027:2783..3202(-)	frameshift		2699,3180,2838	WP_121576702.1	IS3 family transposase	83.5	31.2	36.2
MGA_1658	LOCUS_16170	sequence027:3991..4218(+)	frameshift		3964	WP_003416786.1	IS30 family transposase	100.0	22.7	57.7
MGA_1675	LOCUS_16340	sequence027:23224..25017(-)	partial			WP_010950491.1	PE family protein	24.6	17.2	59.9
MGA_1738	LOCUS_16970	sequence027:93117..94883(+)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	55.1	55.4	80.0
MGA_1744	LOCUS_17020	sequence029:89..436(+)	frameshift		98,386,80,401,83,407,89,122,92	WP_122524938.1	PPE domain-containing protein	82.6	2.9	65.3
MGA_1745	LOCUS_17030	sequence029:369..3914(+)	frameshift,internal_stop_codon	2308..2310(+)	385,2340,394,400,2291,406,2359,409	WP_003906336.1	PPE family protein	98.6	49.3	48.6
MGA_1752	LOCUS_17100	sequence029:10336..10782(-)	partial			WP_013229702.1	SRPBCC family protein	75.0	69.6	37.5
MGA_1786	LOCUS_17440	sequence029:44708..45685(+)	partial			WP_003114566.1	oxidoreductase	68.9	76.1	36.0
MGA_1803	LOCUS_17610	sequence029:63322..64971(+)	frameshift		64923	WP_003407779.1	MMPL family transporter	96.9	55.0	73.3
MGA_1804	LOCUS_17620	sequence029:64968..66218(+)	frameshift		64923	WP_003407779.1	MMPL family transporter	100.0	43.1	75.5
MGA_1832	LOCUS_17900	sequence029:97511..98173(+)	partial			WP_003415107.1	DNA-binding protein HupB	49.5	50.9	97.2
MGA_1867	LOCUS_18250	sequence029:133701..134210(+)	frameshift		134189	WP_010907552.1	chorismate pyruvate-lyase family protein	97.0	78.1	57.3
MGA_1871	LOCUS_18290	sequence029:144030..144194(+)	partial			WP_011731392.1	IS481-like element ISMsm9 family transposase	100.0	16.4	77.8
MGA_1884	LOCUS_18420	sequence029:177454..>179189(-)	partial			WP_003414835.1	phthiocerol type I polyketide synthase PpsB	97.9	37.9	66.8
MGA_1890	LOCUS_18470	sequence030:7091..8080(-)	partial			WP_005086030.1	MFS transporter	90.6	71.7	57.3
MGA_1903	LOCUS_18600	sequence030:20170..24039(-)	partial			WP_164929092.1	ATP-binding protein	56.4	60.5	41.0
MGA_1934	LOCUS_18910	sequence030:57611..>58617(-)	partial			WP_003911169.1	type I polyketide synthase	99.4	23.8	57.2
MGA_1945	LOCUS_19010	sequence032:12004..13374(-)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	44.3	52.5	36.6
MGA_1952	LOCUS_19080	sequence032:20508..20717(-)	partial			WP_003400629.1	hypothetical protein	91.3	48.8	58.7
MGA_1963	LOCUS_19190	sequence032:29571..30794(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	37.8	38.6	33.3
MGA_1967	LOCUS_19230	sequence032:34504..34977(+)	partial			WP_003400664.1	SRPBCC family protein	98.7	69.2	82.6
MGA_1969	LOCUS_19250	sequence032:35604..36614(-)	partial			WP_126863657.1	LLM class flavin-dependent oxidoreductase	63.1	57.1	32.1
MGA_1975	LOCUS_19310	sequence032:42819..44534(+)	partial			WP_011140563.1	hypothetical protein	43.1	83.1	33.5
MGA_2018	LOCUS_19740	sequence032:94175..95848(+)	partial			WP_010886066.1	PE family protein	24.1	27.0	62.7
MGA_2063	LOCUS_20190	sequence032:146921..147133(-)	partial			WP_003977449.1	TOBE domain-containing protein	92.9	45.3	47.7
MGA_2074	LOCUS_20300	sequence032:156068..156613(+)	frameshift		155940	WP_003400961.1	TetR/AcrR family transcriptional regulator	98.9	63.9	68.7
MGA_2083	LOCUS_20390	sequence032:167146..168894(-)	partial			WP_003901256.1	PPE family protein	77.8	67.3	50.1
MGA_2134	LOCUS_20900	sequence032:219684..220499(+)	partial			WP_045843938.1	hypothetical protein	60.9	73.3	77.0
MGA_2144	LOCUS_21000	sequence032:231239..234643(-)	partial			WP_009939865.1	PE family protein	10.2	21.8	53.4
MGA_2148	LOCUS_21040	sequence032:238559..239512(+)	frameshift,internal_stop_codon	238600..238602(+)	238481,238626	WP_003916225.1	L,D-transpeptidase LdtMt4	79.5	68.9	88.1
MGA_2167	LOCUS_21230	sequence032:264977..265378(-)	partial			WP_013228395.1	CD225/dispanin family protein	49.6	53.5	46.4
MGA_2171	LOCUS_21240	sequence035:338..640(-)	frameshift,internal_stop_codon	326..328(-),172..174(-)	193,412	WP_141270575.1	ISL3-like element ISAar39 family transposase	75.0	17.2	72.0
MGA_2173	LOCUS_21260	sequence035:2480..2842(-)	frameshift,internal_stop_codon	2479..2481(-)	3010,2878	WP_011015071.1	ISL3-like element IS31831 family transposase	92.5	25.2	51.8
MGA_2184	LOCUS_21340	sequence037:8120..8395(-)	frameshift,internal_stop_codon	8120..8122(-)	8104	WP_003402695.1	glutaredoxin family protein	90.1	84.5	78.0
MGA_2188	LOCUS_21380	sequence037:13786..15531(+)	partial			WP_010950544.1	PE family protein	20.8	24.6	55.4
MGA_2192	LOCUS_21420	sequence037:19517..20428(+)	frameshift		19503	WP_003402684.1	HAD-IB family hydrolase	93.1	76.7	85.0
MGA_2195	LOCUS_21450	sequence037:21961..22635(-)	partial			WP_003898486.1	lysophospholipid acyltransferase family protein	100.0	62.6	91.1
MGA_2223	LOCUS_21700	sequence040:1916..>3487(-)	frameshift		2083	WP_009968094.1	non-ribosomal peptide synthetase DhbF	90.1	18.4	45.9
MGA_2224	LOCUS_21710	sequence041:100..1863(-)	partial			WP_003975395.1	alpha/beta hydrolase	73.6	84.8	32.7
MGA_2232	LOCUS_21790	sequence041:9204..9494(-)	internal_stop_codon	9501..9503(-)		WP_011731350.1	amidohydrolase family protein	78.1	18.3	40.3
MGA_2233	LOCUS_21800	sequence041:9501..10472(-)	internal_stop_codon	9501..9503(-)		WP_003896236.1	amidohydrolase family protein	87.6	65.2	45.1
MGA_2247	LOCUS_21940	sequence041:29097..30620(-)	partial			WP_004552892.1	MFS transporter	33.3	41.3	28.7
MGA_2249	LOCUS_21960	sequence041:31164..31631(-)	partial			WP_005479856.1	2,4'-dihydroxyacetophenone dioxygenase family protein	57.4	54.7	36.6
MGA_2251	LOCUS_21980	sequence041:33192..33992(+)	partial			WP_011029339.1	SDR family oxidoreductase	95.9	44.1	44.6
MGA_2255	LOCUS_22020	sequence041:38413..39933(-)	partial			WP_010886116.1	PE family protein	26.3	27.1	62.4
MGA_2258	LOCUS_22050	sequence041:42236..43477(-)	partial			WP_005114807.1	divalent metal cation transporter	81.4	60.6	35.7
MGA_2260	LOCUS_22070	sequence041:44560..47469(-)	partial			WP_010950905.1	PE family protein	92.9	58.1	25.9
MGA_2273	LOCUS_22200	sequence041:65168..66535(-)	partial			WP_010879270.1	amino acid permease	88.1	74.6	41.5
MGA_2278	LOCUS_22250	sequence041:74731..76242(-)	frameshift		74709,74751	WP_011729139.1	MFS transporter	99.0	79.0	68.3
MGA_2280	LOCUS_22270	sequence041:77800..78855(+)	partial			WP_013226661.1	VWA domain-containing protein	82.6	18.8	26.6
MGA_2293	LOCUS_22400	sequence041:95384..96184(-)	partial			WP_011727499.1	glycosyl transferase	95.1	73.3	58.9
MGA_2310	LOCUS_22540	sequence044:9092..9445(-)	frameshift		9624,9609,9603,9627	WP_003906700.1	PPE family protein	100.0	11.9	59.0
MGA_2311	LOCUS_22550	sequence044:9493..9948(-)	frameshift,internal_stop_codon	10005..10007(-)	9638,9606,9624,9932,9438,9630,10047	WP_010950590.1	PPE family protein	64.9	9.8	59.2
MGA_2313	LOCUS_22570	sequence044:10536..12110(-)	frameshift,internal_stop_codon	11024..11026(-),10994..10996(-),10859..10861(-),10904..10906(-),10829..10831(-)	10598,10601,10570,11147,10571,10579,10580,10967,11066,10583,10783	WP_010886126.1	PPE family protein	98.1	50.0	48.5
MGA_2326	LOCUS_22700	sequence044:25031..26893(-)	partial			WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	49.5	64.6	68.3
MGA_2365	LOCUS_23090	sequence044:66354..67589(-)	partial			WP_011726850.1	LuxR C-terminal-related transcriptional regulator	71.8	74.7	36.6
MGA_2386	LOCUS_23300	sequence044:84960..86180(+)	partial			WP_011727070.1	PPE family protein	85.5	69.8	32.6
MGA_2391	LOCUS_23350	sequence044:89932..90201(-)	partial			WP_001040568.1	elongation factor Tu	95.5	22.3	50.0
MGA_2394	LOCUS_23380	sequence044:91568..92581(-)	partial			WP_162496169.1	NADP-dependent oxidoreductase	97.9	74.4	50.9
MGA_2400	LOCUS_23440	sequence044:97207..97626(+)	partial			WP_012257279.1	LLM class F420-dependent oxidoreductase	91.4	51.6	39.7
MGA_2417	LOCUS_23610	sequence044:113730..114830(-)	partial			WP_066877136.1	FAD-binding oxidoreductase	20.8	17.1	40.8
MGA_2424	LOCUS_23680	sequence044:120941..122608(+)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	55.3	54.8	66.8
MGA_2426	LOCUS_23700	sequence044:123381..124649(-)	partial			WP_011087309.1	TOMM precursor leader peptide-binding protein	35.5	19.9	26.5
MGA_2431	LOCUS_23750	sequence044:130515..131681(+)	partial			WP_223294576.1	DUF3179 domain-containing protein	71.9	80.2	23.2
MGA_2432	LOCUS_23760	sequence044:131822..133786(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	52.3	56.5	55.4
MGA_2439	LOCUS_23830	sequence044:143604..146195(+)	partial			WP_099318959.1	PE family protein	13.7	25.8	55.1
MGA_2441	LOCUS_23850	sequence044:146924..147238(-)	partial			WP_005089627.1	hypothetical protein	67.3	68.2	44.0
MGA_2454	LOCUS_23980	sequence044:157279..157950(+)	partial			WP_158894136.1	hypothetical protein	95.5	67.5	33.2
MGA_2458	LOCUS_24020	sequence044:161919..165275(+)	partial			WP_013221973.1	HEAT repeat domain-containing protein	32.4	31.6	23.5
MGA_2464	LOCUS_24080	sequence044:170393..172303(-)	partial			WP_014000955.1	PE family protein	18.9	18.8	65.8
MGA_2477	LOCUS_24210	sequence044:184400..184843(+)	partial			WP_003899146.1	hypothetical protein	99.3	67.0	71.2
MGA_2482	LOCUS_24260	sequence044:189132..193952(-)	partial			WP_010886138.1	type I polyketide synthase	100.0	38.3	79.8
MGA_2483	LOCUS_24270	sequence044:193954..194865(-)	partial			WP_010886138.1	type I polyketide synthase	99.3	7.1	79.1
MGA_2485	LOCUS_24280	sequence046:2..238(+)	partial			WP_003406867.1	adenylate/guanylate cyclase domain-containing protein	78.2	11.4	72.1
MGA_2499	LOCUS_24420	sequence046:17682..17867(+)	internal_stop_codon	17865..17867(+)		WP_010886118.1	PE family protein	100.0	8.2	67.2
MGA_2506	LOCUS_24490	sequence046:27994..30576(-)	frameshift,internal_stop_codon	27876..27878(-),27945..27947(-)	28352,27995	WP_010950464.1	PE family protein	13.7	19.4	44.9
MGA_2535	LOCUS_24780	sequence046:65344..66774(-)	partial			WP_003911027.1	PE family protein	30.0	31.9	47.6
MGA_2536	LOCUS_24790	sequence046:66878..68482(-)	partial			WP_003911027.1	PE family protein	22.8	27.8	60.7
MGA_2573	LOCUS_25160	sequence046:110558..111163(-)	partial			WP_003973221.1	GNAT family N-acetyltransferase	84.6	74.0	48.0
MGA_2590	LOCUS_25330	sequence046:135817..136023(+)	partial			WP_003412226.1	hypothetical protein	64.7	43.4	61.2
MGA_2608	LOCUS_25430	sequence052:381..2426(-)	frameshift		512,2590,511	WP_013226861.1	non-ribosomal peptide synthetase	93.2	9.9	47.3
MGA_2609	LOCUS_25440	sequence052:2423..3076(-)	frameshift		3092,2596,2590	WP_011028842.1	non-ribosomal peptide synthetase	74.7	2.2	54.3
MGA_2613	LOCUS_25460	sequence053:1730..2224(-)	frameshift		1792,1780,1461,1801	WP_010950791.1	PE family protein	71.3	19.2	66.1
MGA_2631	LOCUS_25640	sequence053:15811..16224(+)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	95.6	73.9	62.4
MGA_2637	LOCUS_25700	sequence053:20111..24577(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	98.2	26.7	51.5
MGA_2643	LOCUS_25760	sequence053:30885..31061(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	79.3	66.7	67.4
MGA_2666	LOCUS_25990	sequence053:55688..56722(-)	partial			WP_003409337.1	adhesin Apa	53.8	56.9	80.5
MGA_2689	LOCUS_26220	sequence053:78407..80068(+)	internal_stop_codon	80066..80068(+)		WP_010950464.1	PE family protein	21.3	19.4	53.4
MGA_2694	LOCUS_26270	sequence053:86838..88403(+)	partial			WP_010950491.1	PE family protein	24.6	15.5	61.4
MGA_2708	LOCUS_26410	sequence053:104781..107462(+)	partial			WP_010886091.1	PE family protein	13.7	19.5	52.5
MGA_2713	LOCUS_26460	sequence053:111679..112002(+)	partial			WP_013531164.1	alpha/beta hydrolase	84.1	28.6	37.8
MGA_2729	LOCUS_26620	sequence053:131802..131948(-)	frameshift		131934	WP_003408840.1	effector	91.7	46.8	93.2
MGA_2733	LOCUS_26660	sequence053:133631..133897(-)	partial			WP_003406566.1	DUF732 domain-containing protein	89.8	69.0	43.0
MGA_2746	LOCUS_26790	sequence053:151746..152240(+)	internal_stop_codon	152238..152240(+)		WP_005081171.1	cysteine hydrolase	100.0	72.9	76.2
MGA_2748	LOCUS_26800	sequence054:302..>1722(-)	partial			WP_010950703.1	PPE family protein	94.5	73.3	44.0
MGA_2750	LOCUS_26810	sequence055:1414..1626(+)	partial			WP_003403439.1	siderophore transporter accessory protein MmpS5	98.6	48.6	49.3
MGA_2751	LOCUS_26820	sequence055:1796..2827(-)	partial			WP_011727218.1	cytochrome P450	95.0	71.6	55.2
MGA_2782	LOCUS_27130	sequence055:37624..39528(+)	partial			WP_003900169.1	hypothetical protein	66.4	74.5	57.1
MGA_2794	LOCUS_27250	sequence055:48333..49034(-)	partial			WP_010908794.1	hypothetical protein	65.7	73.9	56.2
MGA_2817	LOCUS_27480	sequence055:75749..78136(-)	partial			WP_003721622.1	ABC transporter permease	67.8	48.5	18.2
MGA_2823	LOCUS_27540	sequence055:84471..84668(+)	partial			WP_003894957.1	hypothetical protein	93.8	73.5	54.1
MGA_2824	LOCUS_27550	sequence055:84685..85125(-)	partial			WP_011729266.1	cytochrome P450	99.3	35.6	81.4
MGA_2825	LOCUS_27560	sequence055:85087..85332(+)	frameshift		85314,85371	WP_011730811.1	TetR/AcrR family transcriptional regulator	70.4	27.4	64.9
MGA_2826	LOCUS_27570	sequence055:85382..85654(+)	frameshift,internal_stop_codon	85654..85656(+)	85314,85371	WP_011730811.1	TetR/AcrR family transcriptional regulator	98.9	42.8	57.3
MGA_2827	LOCUS_27580	sequence055:85725..86555(-)	partial			WP_003417299.1	BTAD domain-containing putative transcriptional regulator	97.5	70.3	60.2
MGA_2828	LOCUS_27590	sequence055:87877..89592(+)	frameshift,internal_stop_codon	88814..88816(+),88745..88747(+),89159..89161(+),89024..89026(+),89144..89146(+)	88992,89506,88902,89511,89544,89514,89515,88683,89200,89500,89212,89502	WP_010950590.1	PPE family protein	95.6	52.0	57.2
MGA_2829	LOCUS_27600	sequence055:89532..90392(+)	frameshift		89511,89514,90383,89520,89529,90362,90363,89502	WP_003906700.1	PPE family protein	95.5	29.7	36.6
MGA_2830	LOCUS_27610	sequence055:90403..90945(+)	frameshift		90362,90347,90380	WP_010886126.1	PPE family protein	97.8	16.7	73.9
MGA_2840	LOCUS_27710	sequence055:102486..103508(+)	partial			WP_003900174.1	TIGR03086 family metal-binding protein	95.3	74.7	71.9
MGA_2841	LOCUS_27720	sequence055:103505..107782(-)	partial			WP_010950415.1	PE family protein	8.3	9.0	64.4
MGA_2875	LOCUS_28050	sequence056:638..>2043(-)	partial			WP_015288299.1	PPE family protein	90.1	67.7	51.1
MGA_2878	LOCUS_28060	sequence058:1734..>4001(-)	partial			WP_011030787.1	type I polyketide synthase	89.7	14.2	42.8
MGA_2880	LOCUS_28070	sequence059:180..3179(-)	frameshift		230	WP_011726917.1	non-ribosomal peptide synthetase	98.5	38.1	59.8
MGA_2884	LOCUS_28080	sequence062:1..1848(+)	partial			WP_122524938.1	PPE domain-containing protein	96.1	16.8	39.3
MGA_2895	LOCUS_28190	sequence062:10794..11429(-)	partial			WP_005110186.1	hypothetical protein	94.8	73.7	29.6
MGA_2898	LOCUS_28220	sequence062:12873..13103(-)	partial			WP_003414184.1	hypothetical protein	53.9	65.1	68.3
MGA_2900	LOCUS_28240	sequence062:15182..16492(+)	partial			WP_003401347.1	PPE family protein	47.7	36.9	50.0
MGA_2901	LOCUS_28250	sequence062:16773..17261(+)	partial			WP_005086416.1	hypothetical protein	67.9	76.4	43.2
MGA_2903	LOCUS_28270	sequence062:18254..22126(+)	frameshift,internal_stop_codon	22124..22126(+)	18114	WP_010886165.1	PE family protein	8.8	7.4	57.9
MGA_2921	LOCUS_28450	sequence062:43713..45473(-)	partial			WP_010950791.1	PE family protein	21.3	20.3	52.8
MGA_2928	LOCUS_28520	sequence062:51094..52017(-)	partial			WP_011730613.1	diiron oxygenase	98.0	73.1	72.8
MGA_2930	LOCUS_28540	sequence062:53078..54784(+)	partial			WP_010950464.1	PE family protein	20.2	18.9	57.4
MGA_2931	LOCUS_28550	sequence062:54860..56569(+)	partial			WP_003911027.1	PE family protein	21.6	27.6	60.2
MGA_2932	LOCUS_28560	sequence062:56688..57749(+)	partial			WP_099318959.1	PE family protein	37.1	28.6	56.5
MGA_2937	LOCUS_28610	sequence062:62339..62611(-)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	74.4
MGA_2938	LOCUS_28620	sequence062:63044..65050(+)	partial			WP_010950839.1	PPE family protein	61.1	58.4	39.0
MGA_2940	LOCUS_28640	sequence062:67519..67821(-)	frameshift		67929,67881	WP_011730597.1	hypothetical protein	97.0	42.7	56.7
MGA_2945	LOCUS_28690	sequence062:71621..72952(-)	partial			WP_010886108.1	PE family protein	30.0	15.6	60.9
MGA_2967	LOCUS_28910	sequence062:99670..100005(-)	partial			WP_010907580.1	zinc ribbon domain-containing protein	52.3	58.6	89.7
MGA_2976	LOCUS_29000	sequence062:109283..110404(+)	partial			WP_011027473.1	glycogen synthase	70.2	74.4	30.7
MGA_2977	LOCUS_29010	sequence062:110498..111259(+)	partial			WP_033448326.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	45.1	45.2	42.2
MGA_2983	LOCUS_29070	sequence062:117090..118046(+)	partial			WP_082769289.1	class I SAM-dependent methyltransferase	78.3	74.6	51.0
MGA_2985	LOCUS_29090	sequence062:119113..121104(-)	partial			WP_005094336.1	glycosyltransferase family 2 protein	29.3	66.6	32.2
MGA_2988	LOCUS_29120	sequence062:124113..124979(-)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	57.6	32.9	39.8
MGA_2996	LOCUS_29200	sequence062:131263..131844(+)	internal_stop_codon	131161..131163(+)		WP_003405165.1	DUF5642 family protein	99.0	75.8	72.3
MGA_3032	LOCUS_29550	sequence062:174697..174990(+)	partial			WP_005110193.1	hypothetical protein	78.4	74.0	55.8
MGA_3042	LOCUS_29640	sequence062:184710..185063(-)	partial			WP_011228388.1	site-specific integrase	55.6	16.6	43.1
MGA_3045	LOCUS_29670	sequence062:188041..188361(-)	partial			WP_076611786.1	IS3-like element ISMsm7 family transposase	37.7	10.9	61.9
MGA_3047	LOCUS_29690	sequence062:190299..190526(-)	partial			WP_085976170.1	IS3 family transposase	66.7	12.7	74.0
MGA_3048	LOCUS_29700	sequence062:190435..190872(-)	frameshift		190543,190871	WP_085976939.1	IS3 family transposase	75.2	28.2	67.9
MGA_3052	LOCUS_29740	sequence062:192594..193829(-)	partial			WP_003899159.1	hypothetical protein	56.7	68.7	54.3
MGA_3068	LOCUS_29900	sequence062:207032..208285(+)	frameshift		206802	WP_015287743.1	DUF4226 domain-containing protein	88.5	79.4	50.5
MGA_3103	LOCUS_30250	sequence062:240793..241542(+)	frameshift		240736	WP_131337810.1	LuxR family transcriptional regulator	87.1	23.5	45.2
MGA_3111	LOCUS_30330	sequence062:250881..254051(+)	partial			WP_139131626.1	beta-ketoacyl synthase N-terminal-like domain-containing protein	85.6	63.7	44.0
MGA_3120	LOCUS_30370	sequence065:1189..>4099(-)	partial			WP_206334115.1	type I polyketide synthase	99.9	19.0	39.5
MGA_3124	LOCUS_30380	sequence068:762..2192(-)	frameshift		830	WP_005112588.1	non-ribosomal peptide synthetase	90.8	5.4	46.0
MGA_3136	LOCUS_30500	sequence068:13788..14231(-)	partial			WP_209912946.1	IS481 family transposase	44.2	16.3	41.5
MGA_3138	LOCUS_30520	sequence068:15383..17326(+)	partial			WP_010886118.1	PE family protein	20.2	17.7	56.5
MGA_3143	LOCUS_30570	sequence068:20703..20873(-)	internal_stop_codon	20703..20705(-)		WP_003404002.1	transglutaminase-like domain-containing protein	91.1	21.1	76.5
MGA_3144	LOCUS_30580	sequence068:20864..21058(-)	internal_stop_codon	20703..20705(-)		WP_003404002.1	transglutaminase-like domain-containing protein	75.0	19.4	58.3
MGA_3149	LOCUS_30630	sequence068:24833..>25573(-)	partial			WP_085976170.1	IS3 family transposase	100.0	55.2	63.7
MGA_3153	LOCUS_30640	sequence070:201..>2267(-)	frameshift		299,308,311	WP_211695346.1	PPE family protein	94.9	20.3	50.7
MGA_3172	LOCUS_30810	sequence072:19796..21034(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	46.1	37.0	63.7
MGA_3208	LOCUS_31130	sequence075:2334..6383(-)	frameshift,internal_stop_codon	5346..5348(-),5244..5246(-),6475..6477(-),5913..5915(-),5568..5570(-),5271..5273(-),6352..6354(-)	4418,2660,6054,2663,6057,5390,2191,4823,2618,6045	WP_010886173.1	PE family protein	7.3	13.9	67.7
MGA_3214	LOCUS_31190	sequence075:11949..12638(+)	frameshift		11796	WP_085976166.1	IS3 family transposase	98.7	59.3	44.9
MGA_3216	LOCUS_31210	sequence075:13266..13844(-)	partial			WP_010950451.1	PE family protein	46.9	10.8	41.1
MGA_3226	LOCUS_31310	sequence075:26287..26661(-)	partial			WP_003416005.1	TetR/AcrR family transcriptional regulator	92.7	56.9	61.7
MGA_3230	LOCUS_31350	sequence075:30806..31603(-)	partial			WP_010957831.1	Gfo/Idh/MocA family oxidoreductase	52.5	27.7	33.1
MGA_3233	LOCUS_31380	sequence075:35086..35409(-)	partial			WP_011015077.1	Hsp70 family protein	92.5	21.5	40.6
MGA_3237	LOCUS_31420	sequence075:40723..41331(+)	partial			WP_014877829.1	hypothetical protein	58.9	72.0	38.6
MGA_3239	LOCUS_31430	sequence076:1521..3335(-)	partial			WP_003414835.1	phthiocerol type I polyketide synthase PpsB	95.4	37.1	56.0
MGA_3272	LOCUS_31740	sequence078:36528..36911(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	90.6	52.3	77.4
MGA_3273	LOCUS_31750	sequence078:37145..37723(+)	partial			WP_003418925.1	DUF2510 domain-containing protein	99.5	73.5	56.5
MGA_3284	LOCUS_31860	sequence078:47696..49429(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	56.2	55.5	66.8
MGA_3298	LOCUS_32000	sequence078:65472..66863(-)	partial			WP_003900090.1	PPE family protein	65.0	59.3	53.8
MGA_3301	LOCUS_32030	sequence078:69157..69441(-)	partial			WP_004190520.1	NADPH-dependent 2,4-dienoyl-CoA reductase	91.5	12.6	41.9
MGA_3314	LOCUS_32160	sequence078:80729..82279(-)	partial			WP_011729255.1	serine/threonine-protein kinase	59.9	62.3	64.4
MGA_3323	LOCUS_32250	sequence078:93217..94425(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	43.8	34.5	57.1
MGA_3334	LOCUS_32360	sequence078:105874..106752(-)	partial			WP_011027928.1	DMT family transporter	75.3	67.9	45.3
MGA_3338	LOCUS_32400	sequence078:108615..109343(+)	frameshift,internal_stop_codon	108462..108464(+)	108421	WP_010886087.1	hypothetical protein	99.6	75.5	71.4
MGA_3339	LOCUS_32410	sequence078:109370..110437(-)	partial			WP_003401347.1	PPE family protein	56.1	36.0	53.0
MGA_3342	LOCUS_32440	sequence078:111688..112152(-)	frameshift		112195	WP_003403998.1	hypothetical protein	98.7	75.9	61.0
MGA_3349	LOCUS_32510	sequence078:117965..118192(+)	frameshift		118144	WP_003898592.1	VOC family protein	81.3	53.0	78.7
MGA_3350	LOCUS_32520	sequence078:118155..118313(+)	frameshift		118144	WP_003898592.1	VOC family protein	100.0	45.2	71.2
MGA_3361	LOCUS_32630	sequence078:130649..130828(-)	partial			WP_003404135.1	DUF3073 domain-containing protein	66.1	65.0	92.3
MGA_3374	LOCUS_32760	sequence078:143852..144403(+)	partial			WP_003903189.1	response regulator transcription factor	99.5	71.4	87.9
MGA_3398	LOCUS_33000	sequence078:165699..166400(+)	partial			WP_013528694.1	AAA family ATPase	99.6	68.3	34.5
MGA_3402	LOCUS_33040	sequence078:169837..170592(-)	partial			WP_011022091.1	restriction endonuclease subunit S	81.3	69.0	37.6
MGA_3414	LOCUS_33160	sequence078:186347..188326(-)	partial			WP_010886172.1	PE family protein	17.1	5.8	36.3
MGA_3420	LOCUS_33190	sequence082:517..1674(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	41.8	32.2	49.7
MGA_3423	LOCUS_33200	sequence085:1..966(+)	frameshift,internal_stop_codon	965..967(+)	954,654	WP_012296655.1	non-ribosomal peptide synthetase	67.0	8.3	47.0
MGA_3426	LOCUS_33210	sequence087:358..1449(+)	frameshift		1278	WP_003400794.1	non-ribosomal peptide synthetase Nrp	67.2	9.5	54.9
MGA_3431	LOCUS_33250	sequence089:2128..3582(+)	partial			WP_011731079.1	adenylate/guanylate cyclase domain-containing protein	74.2	64.3	32.0
MGA_3446	LOCUS_33400	sequence089:17106..18545(+)	partial			WP_011388984.1	esterase-like activity of phytase family protein	74.7	83.1	29.9
MGA_3459	LOCUS_33530	sequence089:32011..32196(+)	partial			WP_003405636.1	class II glutamine amidotransferase	100.0	21.3	60.7
MGA_3460	LOCUS_33540	sequence089:32333..32776(+)	partial			WP_026311868.1	formylglycine-generating enzyme family protein	54.4	24.8	58.5
MGA_3461	LOCUS_33550	sequence089:33283..35796(+)	partial			WP_010886090.1	PE family protein	14.2	13.5	48.7
MGA_3469	LOCUS_33630	sequence089:40968..>42907(-)	partial			WP_010950436.1	PE family protein	8.2	6.6	79.2
MGA_3481	LOCUS_33640	sequence099:1..578(+)	frameshift		470	WP_012296729.1	non-ribosomal peptide synthetase	75.9	4.2	61.0
MGA_3482	LOCUS_33650	sequence099:515..1507(+)	frameshift		470	WP_003400794.1	non-ribosomal peptide synthetase Nrp	67.3	8.8	65.5
MGA_3483	LOCUS_33660	sequence099:1467..1790(+)	frameshift		1685,1462,1399,1465,1691,1724	WP_005112588.1	non-ribosomal peptide synthetase	54.2	0.7	72.4
MGA_3488	LOCUS_33710	sequence099:3669..6095(+)	partial			WP_003400794.1	non-ribosomal peptide synthetase Nrp	48.8	15.6	60.2
MGA_3491	LOCUS_33740	sequence099:8981..9337(+)	partial			WP_003411454.1	TIGR01777 family oxidoreductase	52.5	20.6	69.4
MGA_3518	LOCUS_34000	sequence099:41072..41452(-)	partial			WP_005084922.1	heme-binding protein	65.1	74.5	56.1
MGA_3521	LOCUS_34030	sequence099:44715..47063(-)	partial			WP_010886133.1	PE family protein	10.1	14.5	46.8
MGA_3526	LOCUS_34080	sequence099:52408..53130(+)	frameshift		52370	WP_003411507.1	HAD family hydrolase	99.2	81.8	68.9
MGA_3533	LOCUS_34150	sequence099:58697..59917(+)	frameshift		59716	WP_011726768.1	IS1380-like element ISMsm3 family transposase	85.2	74.1	75.8
MGA_3534	LOCUS_34160	sequence099:59950..60102(+)	frameshift		59716	WP_011726768.1	IS1380-like element ISMsm3 family transposase	98.0	10.5	87.8
MGA_3540	LOCUS_34220	sequence099:65276..66337(-)	partial			WP_003112998.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	66.3	72.8	39.8
MGA_3544	LOCUS_34260	sequence099:68748..71372(+)	partial			WP_010886084.1	PE family protein	14.4	16.1	44.4
MGA_3565	LOCUS_34470	sequence099:94082..94327(+)	partial			WP_003411608.1	hypothetical protein	93.8	45.5	77.6
MGA_3575	LOCUS_34570	sequence099:103285..103641(+)	partial			WP_223495338.1	hypothetical protein	33.1	57.1	60.0
MGA_3576	LOCUS_34580	sequence099:103665..105599(-)	partial			WP_003899240.1	Hsp70 family protein	73.8	77.0	65.6
MGA_3581	LOCUS_34630	sequence099:110192..110818(-)	partial			WP_010940624.1	class I SAM-dependent methyltransferase	51.9	43.1	34.5
MGA_3591	LOCUS_34730	sequence099:116984..117991(-)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	58.2	58.4	31.7
MGA_3593	LOCUS_34750	sequence099:119838..120170(-)	frameshift,internal_stop_codon	119786..119788(-)	119620	WP_156439539.1	IS3 family transposase	48.2	13.4	52.8
MGA_3599	LOCUS_34810	sequence099:125559..125828(-)	frameshift		125851	WP_001299612.1	IS3 family transposase	98.9	27.4	47.7
MGA_3600	LOCUS_34820	sequence099:126210..126545(-)	frameshift		126550	WP_011726739.1	ISL3-like element IS1096 family transposase	96.4	24.5	58.3
MGA_3601	LOCUS_34830	sequence099:126542..127354(-)	frameshift		127427,126550	WP_141270575.1	ISL3-like element ISAar39 family transposase	93.3	56.4	54.8
MGA_3637	LOCUS_35150	sequence102:34184..34378(-)	frameshift		34452	WP_011731060.1	response regulator	96.9	41.9	87.1
MGA_3641	LOCUS_35190	sequence102:37825..38508(+)	frameshift,internal_stop_codon	37817..37819(+)	37768	WP_003899998.1	GtrA family protein	100.0	82.0	82.3
MGA_3645	LOCUS_35230	sequence102:41662..41973(+)	partial			WP_003900000.1	acyl-CoA carboxylase subunit epsilon	99.0	71.2	53.2
MGA_3650	LOCUS_35280	sequence102:45907..55380(-)	partial			WP_011267345.1	non-ribosomal peptide synthetase	56.2	65.5	30.9
MGA_3654	LOCUS_35320	sequence102:58353..58664(-)	frameshift		58666	WP_003417162.1	protein UsfY	99.0	74.5	81.4
MGA_3664	LOCUS_35420	sequence102:71113..72216(-)	partial			WP_003404747.1	PPE family protein	60.5	55.6	37.3
MGA_3711	LOCUS_35860	sequence104:7911..8267(-)	partial			WP_011730106.1	OB-fold domain-containing protein	77.1	16.7	41.3
MGA_3712	LOCUS_35870	sequence104:8318..9511(+)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.2
MGA_3728	LOCUS_35970	sequence109:84..878(+)	partial			WP_085976166.1	IS3 family transposase	98.9	68.5	56.1
MGA_3729	LOCUS_35980	sequence109:879..1085(+)	internal_stop_codon	1083..1085(+)		WP_167470730.1	integrase core domain-containing protein	75.0	51.0	55.8
MGA_3735	LOCUS_36020	sequence111:2481..3053(-)	partial			WP_011014460.1	IS1380-like element IS1677 family transposase	58.4	23.6	47.7
MGA_3736	LOCUS_36030	sequence111:3860..6568(+)	partial			WP_010950464.1	PE family protein	12.7	18.9	47.0
MGA_3737	LOCUS_36040	sequence111:6619..7077(+)	frameshift,internal_stop_codon	7174..7176(+),7075..7077(+)	7209	WP_169733975.1	IS256 family transposase	74.3	27.0	44.2
MGA_3748	LOCUS_36150	sequence111:17727..18182(-)	frameshift,internal_stop_codon	18302..18304(-),18326..18328(-)	18223	WP_011728521.1	IS30-like element ISMsm8 family transposase	99.3	32.2	72.0
MGA_3749	LOCUS_36160	sequence111:18326..18733(-)	frameshift,internal_stop_codon	18919..18921(-),18301..18303(-),18325..18327(-)	18849,18225	WP_011728521.1	IS30-like element ISMsm8 family transposase	98.5	28.5	61.7
MGA_3752	LOCUS_36190	sequence111:21270..21758(+)	partial			WP_011970928.1	IS110 family transposase	74.7	32.5	44.6
MGA_3753	LOCUS_36200	sequence111:22063..22401(+)	internal_stop_codon	22399..22401(+),22417..22419(+)		WP_011727590.1	IS1380-like element ISMsm11 family transposase	100.0	24.0	78.6
MGA_3755	LOCUS_36220	sequence111:23087..23266(+)	internal_stop_codon	23264..23266(+)		WP_011726740.1	plasmid pRiA4b ORF-3 family protein	66.1	16.7	71.8
MGA_3758	LOCUS_36240	sequence111:26016..26429(+)	frameshift,internal_stop_codon	26529..26531(+)	26291	WP_003401488.1	type VII secretion system ESX-3 target PPE4	93.4	25.1	57.4
MGA_3759	LOCUS_36250	sequence111:26408..26530(+)	frameshift,internal_stop_codon	26529..26531(+)	26291	WP_003401488.1	type VII secretion system ESX-3 target PPE4	100.0	7.8	85.0
MGA_3762	LOCUS_36280	sequence111:27135..27395(+)	frameshift,internal_stop_codon	27393..27395(+)	27262	WP_225580817.1	IS3 family transposase	59.3	13.2	74.5
MGA_3766	LOCUS_36320	sequence112:1136..2218(-)	frameshift		2277,2262	WP_015508323.1	type I polyketide synthase	34.7	1.6	41.1
MGA_3769	LOCUS_36330	sequence114:3..>6068(-)	partial			WP_015508323.1	type I polyketide synthase	95.9	23.4	41.3
MGA_3792	LOCUS_36540	sequence117:19492..20118(-)	frameshift		20168	WP_003898609.1	M15 family metallopeptidase	99.5	80.9	74.9
MGA_3794	LOCUS_36560	sequence117:20994..21812(+)	partial			WP_005082057.1	cellulose-binding domain-containing protein	37.1	71.1	52.5
MGA_3810	LOCUS_36720	sequence117:35345..36295(+)	partial			WP_013530979.1	SDR family NAD(P)-dependent oxidoreductase	63.0	66.7	39.4
MGA_3811	LOCUS_36730	sequence117:36292..37107(+)	partial			WP_013529311.1	acetoacetate decarboxylase	35.8	39.1	35.0
MGA_3812	LOCUS_36740	sequence117:37110..38324(+)	partial			WP_013225697.1	amidohydrolase family protein	71.8	72.9	30.4
MGA_3821	LOCUS_36810	sequence119:258..917(-)	frameshift		332	WP_010886138.1	type I polyketide synthase	89.0	4.7	93.8
MGA_3824	LOCUS_36840	sequence119:2120..2926(-)	frameshift		2137,2954	WP_003902238.1	apolipoprotein N-acyltransferase	95.5	29.3	82.4
MGA_3825	LOCUS_36850	sequence119:2952..5048(-)	frameshift		2954	WP_003902238.1	apolipoprotein N-acyltransferase	85.4	66.1	74.5
MGA_3829	LOCUS_36890	sequence119:8309..9934(+)	partial			WP_011057303.1	DUF389 domain-containing protein	37.9	59.5	30.7
MGA_3856	LOCUS_37160	sequence119:41501..43843(-)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	67.6	67.0	39.3
MGA_3857	LOCUS_37170	sequence119:44464..44718(+)	frameshift		44666,44620,44413	WP_225580817.1	IS3 family transposase	94.0	20.5	62.0
MGA_3859	LOCUS_37190	sequence119:46964..47662(+)	partial			WP_010950655.1	DUF5631 domain-containing protein	99.1	31.9	64.3
MGA_3865	LOCUS_37250	sequence119:55187..57781(-)	partial			WP_011727967.1	hypothetical protein	62.6	41.9	28.2
MGA_3889	LOCUS_37490	sequence119:83764..86064(-)	frameshift		86113	WP_012296786.1	non-ribosomal peptide synthetase	62.8	15.4	52.4
MGA_3890	LOCUS_37500	sequence119:86096..86743(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	99.1	3.9	54.9
MGA_3891	LOCUS_37510	sequence119:86745..>88479(-)	partial			WP_005112588.1	non-ribosomal peptide synthetase	96.7	6.5	61.0
MGA_3894	LOCUS_37530	sequence120:2386..5193(+)	frameshift		5160,5157	WP_163682492.1	non-ribosomal peptide synthetase	97.8	16.3	45.9
MGA_3897	LOCUS_37540	sequence122:292..6285(-)	frameshift		384,552	WP_206334115.1	type I polyketide synthase	72.0	26.3	47.0
MGA_3915	LOCUS_37690	sequence123:19425..20219(+)	partial			WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	100.0	39.6	65.5
MGA_3917	LOCUS_37710	sequence123:21878..22705(+)	partial			WP_003901751.1	type VII secretion system ESX-1 associated protein EspJ	81.8	72.5	47.0
MGA_3919	LOCUS_37730	sequence123:24011..26350(-)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	62.5	65.7	49.2
MGA_3924	LOCUS_37780	sequence123:31597..32250(-)	partial			WP_003907154.1	type VII secretion system ESX-2 AAA family ATPase EccA2	84.3	29.6	88.0
MGA_3932	LOCUS_37860	sequence123:38756..39583(-)	frameshift,internal_stop_codon	39677..39679(-)	39803	WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	92.7	27.5	42.0
MGA_3933	LOCUS_37870	sequence123:39792..40679(-)	frameshift,internal_stop_codon	39677..39679(-)	39803	WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	93.2	32.5	67.6
MGA_3936	LOCUS_37900	sequence123:41389..41877(-)	partial			WP_003410707.1	hypothetical protein	87.7	70.6	45.1
MGA_3981	LOCUS_38350	sequence124:28..5406(-)	partial			WP_010886138.1	type I polyketide synthase	94.4	40.6	79.2
MGA_3984	LOCUS_38370	sequence125:2806..>4335(-)	partial			WP_001133941.1	non-ribosomal peptide synthetase DhbF	100.0	21.7	37.8
MGA_3986	LOCUS_38380	sequence127:1..2523(+)	partial			WP_003913253.1	type I polyketide synthase	99.5	38.1	70.7
MGA_3987	LOCUS_38390	sequence127:2577..3233(+)	partial			WP_001087865.1	class I SAM-dependent methyltransferase	77.1	72.5	38.1
MGA_3995	LOCUS_38470	sequence127:11911..12711(+)	partial			WP_001977544.1	aldolase/citrate lyase family protein	66.9	64.8	27.5
MGA_4001	LOCUS_38530	sequence127:18810..18977(-)	internal_stop_codon	18996..18998(-)		WP_003234413.1	antibiotic biosynthesis monooxygenase	94.5	54.7	59.6
MGA_4014	LOCUS_38660	sequence127:32848..34341(-)	partial			WP_010941286.1	glycosyltransferase family 2 protein	42.7	64.9	31.3
MGA_4025	LOCUS_38770	sequence127:47345..48316(+)	partial			WP_061481638.1	hypothetical protein	51.7	60.7	31.2
MGA_4026	LOCUS_38780	sequence127:48321..49841(-)	partial			WP_013225439.1	HAMP domain-containing sensor histidine kinase	65.6	72.6	45.9
MGA_4029	LOCUS_38810	sequence127:52106..52573(+)	partial			WP_011728059.1	nitroreductase family deazaflavin-dependent oxidoreductase	69.7	66.7	48.6
MGA_4051	LOCUS_39030	sequence127:74305..75402(+)	partial			WP_003407494.1	PE family protein	38.9	38.4	52.8
MGA_4053	LOCUS_39050	sequence127:77349..78854(-)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	52.9	27.6	45.9
MGA_4077	LOCUS_39290	sequence127:107084..108400(+)	partial			WP_010950544.1	PE family protein	33.1	29.5	51.7
MGA_4087	LOCUS_39390	sequence127:120809..121534(+)	partial			WP_010950543.1	hypothetical protein	39.8	41.1	46.9
MGA_4124	LOCUS_39760	sequence127:162373..162690(-)	internal_stop_codon	162850..162852(-),162745..162747(-)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	85.7
MGA_4159	LOCUS_40110	sequence127:201163..202269(+)	partial			WP_003899377.1	DUF2189 domain-containing protein	66.0	78.5	61.2
MGA_4190	LOCUS_40420	sequence127:241851..243983(+)	partial			WP_010886165.1	PE family protein	16.8	7.7	55.5
MGA_4193	LOCUS_40450	sequence127:245393..247033(+)	partial			WP_010886152.1	PE family protein	27.5	27.4	61.3
MGA_4194	LOCUS_40460	sequence127:247254..248987(+)	partial			WP_010886152.1	PE family protein	26.3	27.8	60.5
MGA_4203	LOCUS_40550	sequence127:255095..255805(-)	partial			WP_010886117.1	PE family protein	56.8	10.1	61.2
MGA_4232	LOCUS_40840	sequence127:283212..283850(-)	partial			WP_013225629.1	hypothetical protein	43.9	75.2	33.3
MGA_4239	LOCUS_40910	sequence127:291780..294098(-)	partial			WP_009938544.1	PE family protein	15.3	15.2	64.4
MGA_4251	LOCUS_41030	sequence127:302908..304002(+)	frameshift		303993	WP_010950755.1	ACR3 family arsenite efflux transporter	98.6	72.1	88.9
MGA_4252	LOCUS_41040	sequence127:303999..304430(+)	frameshift		303993	WP_003413686.1	ACR3 family arsenite efflux transporter	90.2	25.9	84.5
MGA_4254	LOCUS_41060	sequence127:305913..308126(+)	partial			WP_010886116.1	PE family protein	16.6	24.8	63.9
MGA_4274	LOCUS_41260	sequence127:327362..327736(-)	frameshift,internal_stop_codon	327795..327797(-)	327761	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	19.6	84.0
MGA_4275	LOCUS_41270	sequence127:327795..328202(-)	frameshift,internal_stop_codon	327795..327797(-)	327734	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	21.2	88.9
MGA_4276	LOCUS_41280	sequence127:328903..332463(+)	partial			WP_003910308.1	PE family protein	10.1	21.4	50.0
MGA_4293	LOCUS_41450	sequence127:347866..348198(-)	partial			WP_003413930.1	dUTP diphosphatase	87.3	62.3	84.4
MGA_4301	LOCUS_41530	sequence127:353767..355731(+)	partial			WP_004193152.1	T2SS-translocated chitinase	47.6	68.4	38.8
MGA_4329	LOCUS_41810	sequence127:381650..383455(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.0	66.8	52.6
MGA_4335	LOCUS_41870	sequence127:389021..389668(+)	frameshift,internal_stop_codon	389666..389668(+)	389743	WP_011027474.1	(2Fe-2S)-binding protein	99.1	81.8	36.0
MGA_4377	LOCUS_42290	sequence127:431982..432419(-)	internal_stop_codon	432507..432509(-)		WP_003899476.1	Lrp/AsnC family transcriptional regulator	100.0	81.0	88.3
MGA_4405	LOCUS_42570	sequence127:460426..461106(+)	partial			WP_189232996.1	NAD(P)/FAD-dependent oxidoreductase	96.9	64.2	47.7
MGA_4413	LOCUS_42650	sequence127:468209..471058(-)	partial			WP_003899505.1	translation initiation factor IF-2	65.8	69.3	92.1
MGA_4430	LOCUS_42820	sequence127:492039..495062(-)	partial			WP_013228023.1	non-ribosomal peptide synthetase	68.6	37.9	37.8
MGA_4454	LOCUS_43060	sequence127:517595..520180(+)	partial			WP_010886084.1	PE family protein	15.1	17.5	49.6
MGA_4455	LOCUS_43070	sequence127:520517..523096(+)	partial			WP_010886133.1	PE family protein	13.9	23.7	52.1
MGA_4458	LOCUS_43100	sequence127:527986..528954(+)	partial			WP_003899026.1	PPE family protein	66.5	51.5	35.3
MGA_4459	LOCUS_43110	sequence127:529012..529767(-)	partial			WP_003900586.1	gamma-glutamyl-gamma-aminobutyrate hydrolase	88.8	72.4	75.3
MGA_4470	LOCUS_43220	sequence127:541446..541700(+)	partial			WP_003899522.1	DUF2631 domain-containing protein	81.0	69.2	73.6
MGA_4479	LOCUS_43280	sequence130:1..1233(+)	partial			WP_163682492.1	non-ribosomal peptide synthetase	77.1	5.8	56.0
MGA_4481	LOCUS_43290	sequence131:1..609(+)	frameshift		579	WP_003400794.1	non-ribosomal peptide synthetase Nrp	95.5	6.4	53.9
MGA_4531	LOCUS_43750	sequence134:54158..54487(-)	internal_stop_codon	54683..54685(-)		WP_003414678.1	M23 family metallopeptidase	99.1	43.4	74.1
MGA_4537	LOCUS_43810	sequence134:58828..59310(+)	frameshift,internal_stop_codon	59308..59310(+)	59325	WP_011727224.1	MPT63 family protein	81.9	36.5	42.7
MGA_4539	LOCUS_43830	sequence134:60380..60997(-)	frameshift		61142	WP_003414666.1	response regulator transcription factor	90.2	73.4	58.4
MGA_4543	LOCUS_43870	sequence134:64311..66008(+)	partial			WP_010950732.1	PecA family PE domain-processing aspartic protease	60.0	68.1	47.1
MGA_4604	LOCUS_44470	sequence134:131935..132168(-)	partial			WP_003907005.1	hypothetical protein	74.0	84.1	58.6
MGA_4633	LOCUS_44760	sequence134:167984..168361(+)	partial			WP_003900651.1	hypothetical protein	87.2	74.4	55.5
MGA_4639	LOCUS_44820	sequence134:173883..176477(-)	partial			WP_010886133.1	PE family protein	13.7	23.7	44.9
MGA_4649	LOCUS_44920	sequence134:184957..186855(+)	partial			WP_010950840.1	PPE family protein	32.4	34.3	63.3
MGA_4653	LOCUS_44960	sequence134:192833..194071(-)	frameshift		194129	WP_003900642.1	NADH-quinone oxidoreductase subunit L	94.9	61.8	87.2
MGA_4665	LOCUS_45080	sequence134:205598..206950(+)	partial			WP_003913805.1	PPE family protein	38.4	42.3	70.5
MGA_4666	LOCUS_45090	sequence134:207132..208028(+)	frameshift		207758	WP_003900400.1	phospholipase C	73.8	42.2	71.8
MGA_4667	LOCUS_45100	sequence134:207928..208719(+)	frameshift		207761	WP_003899285.1	phospholipase C	99.2	49.2	73.6
MGA_4690	LOCUS_45330	sequence134:230375..230578(+)	partial			WP_001830666.1	acetolactate synthase AlsS	70.1	8.5	48.9
MGA_4692	LOCUS_45350	sequence134:232909..233217(+)	partial			WP_003401485.1	type VII secretion system ESX-3 target PE5	73.5	73.5	49.3
MGA_4694	LOCUS_45370	sequence134:233880..234368(+)	frameshift		234332	WP_003419226.1	PPE family protein	88.9	35.5	62.5
MGA_4695	LOCUS_45380	sequence134:234365..234994(+)	frameshift		234938,234332	WP_003419226.1	PPE family protein	96.7	53.0	47.9
MGA_4700	LOCUS_45430	sequence134:240322..241914(+)	partial			WP_005110647.1	non-ribosomal peptide synthetase	91.5	30.3	38.4
MGA_4716	LOCUS_45590	sequence134:258943..259257(+)	frameshift		259203	WP_003906521.1	HNH endonuclease signature motif containing protein	80.8	18.6	58.3
MGA_4717	LOCUS_45600	sequence134:259254..260315(+)	frameshift		259203	WP_003405897.1	HNH endonuclease signature motif containing protein	99.2	76.9	66.6
MGA_4723	LOCUS_45660	sequence134:265749..266249(+)	partial			WP_003416124.1	hypothetical protein	39.2	44.1	66.2
MGA_4744	LOCUS_45870	sequence134:286059..286505(+)	partial			WP_030862061.1	pyridoxamine 5'-phosphate oxidase family protein	86.5	41.7	35.7
MGA_4748	LOCUS_45910	sequence134:290403..290891(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	88.3	62.7	42.8
MGA_4787	LOCUS_46300	sequence134:332314..332466(-)	frameshift,internal_stop_codon	332576..332578(-)	332482,332476,332494	WP_010950476.1	PE domain-containing protein	100.0	14.3	62.7
MGA_4794	LOCUS_46350	sequence135:4389..6179(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	69.6	66.1	77.3
MGA_4801	LOCUS_46420	sequence135:10878..11210(-)	partial			WP_003406566.1	DUF732 domain-containing protein	71.8	69.9	73.4
MGA_4802	LOCUS_46430	sequence135:11931..13733(+)	internal_stop_codon	13731..13733(+)		WP_010950464.1	PE family protein	21.8	21.5	55.7
MGA_4824	LOCUS_46650	sequence135:38499..39902(+)	partial			WP_010950464.1	PE family protein	26.1	19.4	59.0
MGA_4839	LOCUS_46800	sequence135:54917..55276(+)	partial			WP_011123284.1	YciI family protein	84.0	45.5	44.6
MGA_4842	LOCUS_46830	sequence135:58900..59418(+)	partial			WP_010886117.1	PE family protein	68.6	8.6	45.8
MGA_4872	LOCUS_47130	sequence135:93550..93753(-)	partial			WP_003406867.1	adenylate/guanylate cyclase domain-containing protein	91.0	11.4	70.5
MGA_4874	LOCUS_47140	sequence136:539..>1573(-)	frameshift		640,574	WP_163682492.1	non-ribosomal peptide synthetase	88.4	5.5	44.1
MGA_4897	LOCUS_47360	sequence137:21056..21571(-)	frameshift		21571,21604,21623	WP_009936776.1	DUF1697 domain-containing protein	100.0	82.6	72.7
MGA_4902	LOCUS_47410	sequence137:23137..24336(-)	frameshift,internal_stop_codon	24386..24388(-)	24024,24364,24063	WP_003406066.1	hypothetical protein	35.6	38.3	86.6
MGA_4911	LOCUS_47500	sequence137:34276..35292(+)	internal_stop_codon	34186..34188(+)		WP_003910446.1	PE family protein	22.5	12.2	51.3
MGA_4914	LOCUS_47530	sequence137:37224..37583(+)	internal_stop_codon	37140..37142(+)		WP_003406163.1	hypothetical protein	99.2	80.8	72.9
MGA_4925	LOCUS_47640	sequence137:54272..56284(-)	partial			WP_010886177.1	PE family protein	18.2	20.9	56.6
MGA_4929	LOCUS_47680	sequence137:60827..61237(+)	frameshift		61099	WP_003401488.1	type VII secretion system ESX-3 target PPE4	93.4	25.0	62.5
MGA_4947	LOCUS_47860	sequence137:81627..82055(-)	frameshift		82063	WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	85.2	37.9	47.9
MGA_4948	LOCUS_47870	sequence137:82055..82603(-)	frameshift,internal_stop_codon	82055..82057(-)	82036	WP_013224382.1	OB-fold domain-containing protein	87.4	50.3	47.2
MGA_4972	LOCUS_48110	sequence137:107988..109784(-)	partial			WP_010886177.1	PE family protein	20.4	20.9	53.3
MGA_4973	LOCUS_48120	sequence137:110029..111846(-)	partial			WP_010950464.1	PE family protein	20.2	19.4	65.6
MGA_4981	LOCUS_48200	sequence137:120243..120647(+)	partial			WP_003406258.1	anti-sigma E factor RseA	84.3	73.4	84.1
MGA_4988	LOCUS_48270	sequence137:127412..128080(-)	partial			WP_003406288.1	DUF4190 domain-containing protein	37.4	41.9	68.7
MGA_5010	LOCUS_48490	sequence137:156473..157246(-)	partial			WP_003900088.1	PPE family protein	69.6	30.2	50.3
MGA_5012	LOCUS_48510	sequence137:157886..159946(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	22.2	27.2	52.6
MGA_5023	LOCUS_48620	sequence137:170701..171234(-)	partial			WP_003407152.1	membrane protein	87.0	66.4	40.9
MGA_5027	LOCUS_48660	sequence137:174885..176888(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	44.4	49.7	87.5
MGA_5029	LOCUS_48680	sequence137:179741..181594(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.7	67.9	63.4
MGA_5086	LOCUS_49220	sequence140:52665..54347(-)	partial			WP_010950544.1	PE family protein	21.8	24.8	52.5
MGA_5098	LOCUS_49340	sequence140:64815..65282(-)	partial			WP_003409199.1	DUF4189 domain-containing protein	59.4	63.6	51.1
MGA_5101	LOCUS_49370	sequence140:68115..69023(-)	frameshift		68312	WP_011730401.1	NAD(P)-dependent oxidoreductase	79.5	65.7	42.8
MGA_5117	LOCUS_49530	sequence140:84146..85378(+)	internal_stop_codon	84147..84149(+)		WP_011730084.1	MCE family protein	86.6	76.2	65.4
MGA_5121	LOCUS_49570	sequence140:88178..88912(-)	partial			WP_003407157.1	membrane protein	75.0	70.1	41.5
MGA_5123	LOCUS_49590	sequence140:89507..89863(-)	partial			WP_003417257.1	pilin structural subunit Mtp	54.2	60.2	60.9
MGA_5137	LOCUS_49730	sequence140:100889..101470(+)	partial			WP_003407152.1	membrane protein	74.1	65.0	62.9
MGA_5158	LOCUS_49940	sequence140:121209..122414(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	43.1	41.0	70.1
MGA_5171	LOCUS_50070	sequence140:133565..133852(+)	partial			WP_003404606.1	MarR family transcriptional regulator	100.0	66.4	87.4
MGA_5173	LOCUS_50090	sequence140:134685..134972(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	74.7	75.5	60.6
MGA_5196	LOCUS_50320	sequence140:160934..162379(-)	partial			WP_010950932.1	MFS transporter	96.5	43.8	35.0
MGA_5225	LOCUS_50570	sequence142:25909..26574(+)	frameshift		26340,26343,26328,26666,26346,26685	WP_010950451.1	PE family protein	65.6	17.4	59.3
MGA_5254	LOCUS_50860	sequence142:65012..65362(+)	frameshift		65356	WP_003899719.1	metallopeptidase family protein	99.1	83.9	84.3
MGA_5258	LOCUS_50900	sequence142:68558..69478(+)	partial			WP_235624060.1	LCP family protein	96.1	68.7	69.4
MGA_5261	LOCUS_50930	sequence142:71064..71852(-)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	72.2	58.0
MGA_5264	LOCUS_50960	sequence142:74488..75240(+)	internal_stop_codon	75238..75240(+)		WP_010950948.1	TMEM165/GDT1 family protein	90.0	75.2	64.2
MGA_5283	LOCUS_51150	sequence142:96977..98062(+)	partial			WP_003899736.1	type VII secretion system ESX-1 associated protein EspE	75.9	68.4	32.9
MGA_5286	LOCUS_51180	sequence142:100207..101133(+)	frameshift		101025	WP_003399995.1	type VII secretion system ESX-1 target EspB	70.8	47.0	47.0
MGA_5294	LOCUS_51260	sequence142:107855..108619(+)	partial			WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	78.7	27.6	57.7
MGA_5304	LOCUS_51350	sequence143:1..2052(+)	partial			WP_010950436.1	PE family protein	8.1	6.9	81.8
MGA_5315	LOCUS_51460	sequence143:13795..14163(-)	partial			WP_003419814.1	hypothetical protein	36.1	34.1	54.5
MGA_5330	LOCUS_51610	sequence143:31402..31845(-)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	65.3	72.2	77.1
MGA_5338	LOCUS_51690	sequence143:39860..40681(+)	partial			WP_003420421.1	lipid uptake coordinator LucA	59.0	63.4	83.2
MGA_5368	LOCUS_51990	sequence143:71435..72946(-)	frameshift		72963	WP_010907996.1	long-chain fatty acid--CoA ligase	99.8	83.7	72.5
MGA_5369	LOCUS_52000	sequence143:72844..73239(-)	frameshift		72963	WP_011729678.1	long-chain fatty acid--CoA ligase	70.2	15.4	75.0
MGA_5400	LOCUS_52310	sequence143:102370..105630(+)	partial			WP_010950666.1	PE family protein	10.6	22.9	37.4
MGA_5408	LOCUS_52370	sequence145:6897..10217(+)	partial			WP_003405919.1	PPE family protein	40.3	72.2	59.4
MGA_5410	LOCUS_52390	sequence145:12519..12848(-)	frameshift		12901	WP_011728836.1	cytochrome P450	98.2	28.0	44.9
MGA_5411	LOCUS_52400	sequence145:12821..13546(-)	frameshift		12892	WP_011728246.1	cytochrome P450	88.4	53.7	40.6
MGA_5417	LOCUS_52460	sequence145:18414..19688(+)	partial			WP_005064806.1	TetR/AcrR family transcriptional regulator	36.8	70.2	33.9
MGA_5428	LOCUS_52570	sequence145:31441..32028(+)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	45.6	61.3	59.6
MGA_5435	LOCUS_52640	sequence145:37125..37826(+)	frameshift		37119	WP_003898734.1	hypothetical protein	98.7	80.8	77.9
MGA_5438	LOCUS_52670	sequence145:39155..39658(-)	partial			WP_003898733.1	hypothetical protein	82.0	59.1	78.8
MGA_5439	LOCUS_52680	sequence145:40086..40502(-)	frameshift		40561,40494	WP_003399879.1	type VII secretion system ESX-1 target PPE68	83.3	31.8	50.4
MGA_5440	LOCUS_52690	sequence145:40463..41008(-)	frameshift		40561,40494	WP_003399879.1	type VII secretion system ESX-1 target PPE68	83.4	41.0	51.7
MGA_5457	LOCUS_52860	sequence145:56017..57582(+)	partial			WP_003911027.1	PE family protein	22.6	26.9	61.0
MGA_5461	LOCUS_52900	sequence145:61593..62174(-)	frameshift		62256	WP_003405815.1	DUF4245 domain-containing protein	99.5	82.4	76.0
MGA_5472	LOCUS_53010	sequence145:73350..74879(-)	partial			WP_010950464.1	PE family protein	23.2	19.4	60.2
MGA_5484	LOCUS_53130	sequence145:85207..86007(-)	frameshift		86026,86023	WP_003405732.1	RDD family protein	62.4	69.2	83.1
MGA_5493	LOCUS_53220	sequence145:96340..99078(+)	partial			WP_099318959.1	PE family protein	12.9	25.8	59.3
MGA_5496	LOCUS_53230	sequence147:1..3998(+)	partial			WP_003917711.1	type I polyketide synthase	93.2	74.5	57.1
MGA_5498	LOCUS_53250	sequence147:5171..6553(+)	partial			WP_012257994.1	AMP-binding protein	36.1	36.0	29.6
MGA_5504	LOCUS_53310	sequence147:13017..13991(-)	partial			WP_010886125.1	PE domain-containing protein	74.4	30.2	26.3
MGA_5510	LOCUS_53370	sequence147:17724..18896(+)	partial			WP_041272317.1	nitroreductase family protein	56.4	74.2	24.2
MGA_5511	LOCUS_53380	sequence147:19029..20417(+)	partial			WP_004191694.1	ATP-dependent zinc metalloprotease FtsH	49.6	36.6	32.9
MGA_5528	LOCUS_53550	sequence147:40071..41525(-)	partial			WP_011728237.1	amidohydrolase family protein	65.9	77.4	39.4
MGA_5573	LOCUS_54000	sequence147:88943..91495(+)	partial			WP_010950597.1	PE family protein	14.8	19.1	49.2
MGA_5585	LOCUS_54110	sequence147:100859..102919(+)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	48.1	44.6	51.2
MGA_5599	LOCUS_54250	sequence148:8453..8947(+)	frameshift,internal_stop_codon	8251..8253(+)	8427	WP_003905677.1	macro domain-containing protein	92.7	44.3	87.5