{ "type": "genome", "identifier": "GCF_003432485.1", "organism": "Actinomadura spongiicola", "title": "Actinomadura spongiicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ren Ji Hospital School of Medicine, Shanghai Jiao Tong University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003432485.1", "bioproject": "PRJNA224116", "biosample": "SAMN09846803", "wgs_master": "QVNQ00000000.1", "refseq_category": "reference genome", "taxid": "2303421", "species_taxid": "2303421", "organism_name": "Actinomadura spongiicola", "infraspecific_name": "strain=LHW52907", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/08/22", "asm_name": "ASM343248v1", "asm_submitter": "Ren Ji Hospital School of Medicine, Shanghai Jiao Tong University", "gbrs_paired_asm": "GCA_003432485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/432/485/GCF_003432485.1_ASM343248v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7711411", "genome_size_ungapped": "7711411", "gc_percent": "70.500000", "replicon_count": "0", "scaffold_count": "29", "contig_count": "29", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003432485.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "7018", "protein_coding_gene_count": "6858", "non_coding_gene_count": "83", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-08-22", "dateModified": "2018-08-22", "datePublished": "2018-08-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomadura spongiicola" ], "sample_taxid": [ "2303421" ], "sample_host_organism": [ "Leucetta 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"matched_fragments": 1749, "total_fragments": 2556, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura syzygii", "strain": "strain=GKU157", "accession": "GCA_008085905.1", "taxid": 1427538, "species_taxid": 1427538, "relation_to_type": "type", "validated": true, "ani": 84.9115, "matched_fragments": 1724, "total_fragments": 2556, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura bangladeshensis", "strain": "strain=DSM 45347", "accession": "GCA_004348335.1", "taxid": 453573, "species_taxid": 453573, "relation_to_type": "type", "validated": true, "ani": 84.8672, "matched_fragments": 1415, "total_fragments": 2556, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura darangshiensis", "strain": "strain=DSM 45941", "accession": "GCA_004349235.1", "taxid": 705336, "species_taxid": 705336, "relation_to_type": "type", "validated": true, "ani": 84.8404, "matched_fragments": 1448, 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