{ "type": "genome", "identifier": "GCF_003568665.1", "organism": "Chitinophaga alhagiae", "title": "Chitinophaga alhagiae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chinese Academy of Agricultural Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003568665.1", "bioproject": "PRJNA224116", "biosample": "SAMN09949662", "wgs_master": "QXMH00000000.1", "refseq_category": "reference genome", "taxid": "2203219", "species_taxid": "2203219", "organism_name": "Chitinophaga alhagiae", "infraspecific_name": "strain=T22", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/13", "asm_name": "ASM356866v1", "asm_submitter": "Chinese Academy of Agricultural Sciences", "gbrs_paired_asm": "GCA_003568665.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/568/665/GCF_003568665.1_ASM356866v1", 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2037, "total_fragments": 2038, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Chitinophaga alhagiae", "strain": "strain=T22", "accession": "GCA_003177275.1", "taxid": 2203219, "species_taxid": 2203219, "relation_to_type": "suspected-type", "validated": true, "ani": 99.9712, "matched_fragments": 889, "total_fragments": 2038, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Chitinophaga lutea", "strain": "strain=ZY74", "accession": "GCA_003813775.1", "taxid": 2488634, "species_taxid": 2488634, "relation_to_type": "type", "validated": true, "ani": 82.2218, "matched_fragments": 1250, "total_fragments": 2038, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga barathri", "strain": "strain=YLT18", "accession": "GCA_003614855.1", "taxid": 1647451, "species_taxid": 1647451, "relation_to_type": "type", "validated": true, "ani": 79.8049, "matched_fragments": 875, "total_fragments": 2038, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga chungangae", "strain": "strain=MAH-28", "accession": "GCA_017742215.1", "taxid": 2821488, "species_taxid": 2821488, "relation_to_type": "type", "validated": true, "ani": 79.787, "matched_fragments": 966, "total_fragments": 2038, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga barathri", "strain": "strain=YLT18", "accession": "GCA_003807585.1", "taxid": 1647451, "species_taxid": 1647451, "relation_to_type": "type", "validated": true, "ani": 79.7732, "matched_fragments": 867, "total_fragments": 2038, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga rhizosphaerae", "strain": "strain=T16R-86", "accession": "GCA_003958645.1", "taxid": 1864947, "species_taxid": 1864947, "relation_to_type": "type", "validated": true, "ani": 78.6703, "matched_fragments": 665, "total_fragments": 2038, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga 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"min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007830125.1", "gtdb_species": "s__Chitinophaga japonensis", "ani": 77.7317, "matched_fragments": 539, "total_fragments": 2038, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.308, "cell_length": 0.473, "doubling_h": null, "growth_tmp": 28.733, "optimum_tmp": 26.937, "optimum_ph": 7.0, "genome_size": 7579043.287, "gc_content": 45.2, "coding_genes": 7126.333, "rRNA16S_genes": 6.0, "tRNA_genes": 72.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.181, "range_salinity": null, "facultative_respiration": 0.058, "anaerobic_respiration": 0.0, 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