{ "type": "genome", "identifier": "GCF_003574675.1", "organism": "Azohydromonas sediminis", "title": "Azohydromonas sediminis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Sun Yat-sen University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003574675.1", "bioproject": "PRJNA224116", "biosample": "SAMN09530198", "wgs_master": "QOAZ00000000.1", "refseq_category": "reference genome", "taxid": "2259674", "species_taxid": "2259674", "organism_name": "Azohydromonas sediminis", "infraspecific_name": "strain=SYSU G00088", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/18", "asm_name": "ASM357467v1", "asm_submitter": "Sun Yat-sen University", "gbrs_paired_asm": "GCA_003574675.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/574/675/GCF_003574675.1_ASM357467v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3755083", "genome_size_ungapped": "3755083", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "123", "contig_count": "123", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003574675.1-RS_2024_03_12", "annotation_date": "2024-03-12", "total_gene_count": "3633", "protein_coding_gene_count": "3502", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-18", "dateModified": "2018-09-18", "datePublished": "2018-09-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Azohydromonas sediminis" ], "sample_taxid": [ "2259674" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Tibet" 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"organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_015476235.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 81.4494, "matched_fragments": 667, "total_fragments": 1200, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_002933415.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 81.446, "matched_fragments": 651, "total_fragments": 1200, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_003349825.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 81.4354, "matched_fragments": 656, "total_fragments": 1200, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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