{ "type": "genome", "identifier": "GCF_003583365.1", "organism": "Fibrisoma montanum", "title": "Fibrisoma montanum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Huazhong Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003583365.1", "bioproject": "PRJNA224116", "biosample": "SAMN09939603", "wgs_master": "QXED00000000.1", "refseq_category": "reference genome", "taxid": "2305895", "species_taxid": "2305895", "organism_name": "Fibrisoma montanum", "infraspecific_name": "strain=HYT19", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/20", "asm_name": "ASM358336v1", "asm_submitter": "Huazhong Agricultural University", "gbrs_paired_asm": "GCA_003583365.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/583/365/GCF_003583365.1_ASM358336v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7799645", "genome_size_ungapped": "7799549", "gc_percent": "54.000000", "replicon_count": "0", "scaffold_count": "42", "contig_count": "42", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003583365.1-RS_2024_09_16", "annotation_date": "2024-09-16", "total_gene_count": "6626", "protein_coding_gene_count": "6546", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-20", "dateModified": "2018-09-20", "datePublished": "2018-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Fibrisoma montanum" ], "sample_taxid": [ "2305895" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Danxia mountain, Shaoguan City, GuangDong Province" ], "sample_host_location_id": [], "data_size": "2.216 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7799645", "Number of Sequences": "42", "Longest Sequences (bp)": "1357106", "N50 (bp)": "727038", "Gap Ratio (%)": "0.001231", "GCcontent (%)": "54.0", "Number of CDSs": "6561", "Average Protein Length": "350.4", "Coding Ratio (%)": "88.4", "Number of rRNAs": "2", "Number of tRNAs": "42", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Fibrisoma montanum", "strain": "strain=HYT19", "accession": "GCA_003583365.1", "taxid": 2305895, "species_taxid": 2305895, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2584, 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