# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence01:460..1002(-)	internal_stop_codon	1021..1023(-)		WP_053344184.1	restriction endonuclease subunit S	92.2	43.9	32.9
MGA_4	LOCUS_00040	sequence01:1428..1934(-)	internal_stop_codon	2103..2105(-),1965..1967(-),2166..2168(-)		WP_011183485.1	tyrosine--tRNA ligase	98.8	40.2	34.5
MGA_5	LOCUS_00050	sequence01:2166..2474(-)	internal_stop_codon	2103..2105(-),2478..2480(-),1965..1967(-),2166..2168(-)		WP_011922558.1	tyrosine--tRNA ligase	99.0	26.1	48.6
MGA_6	LOCUS_00060	sequence01:2478..2660(-)	internal_stop_codon	2478..2480(-)		WP_011166856.1	tyrosine--tRNA ligase	96.7	14.3	55.9
MGA_9	LOCUS_00090	sequence01:3762..4151(+)	internal_stop_codon	3735..3737(+),3747..3749(+)		WP_011948024.1	DegV family protein	82.2	38.0	35.5
MGA_10	LOCUS_00100	sequence01:4184..4477(+)	internal_stop_codon	4475..4477(+)		WP_002455871.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	91.8	62.1	38.9
MGA_12	LOCUS_00120	sequence01:5379..6071(+)	internal_stop_codon	5205..5207(+)		WP_011016472.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	97.8	66.9	45.0
MGA_13	LOCUS_00130	sequence01:6329..6577(-)	internal_stop_codon	6674..6676(-),6860..6862(-),6584..6586(-),6680..6682(-),6731..6733(-)		WP_000571059.1	LLM class flavin-dependent oxidoreductase	90.2	21.3	67.6
MGA_14	LOCUS_00140	sequence01:6938..7396(-)	internal_stop_codon	6674..6676(-),6860..6862(-),6680..6682(-),6938..6940(-),6731..6733(-)		WP_000229797.1	LLM class flavin-dependent oxidoreductase	98.7	43.0	65.3
MGA_19	LOCUS_00190	sequence01:9672..10208(-)	internal_stop_codon	10314..10316(-)		WP_011476532.1	type 1 glutamine amidotransferase domain-containing protein	94.4	72.5	44.0
MGA_42	LOCUS_00420	sequence02:10169..10978(+)	internal_stop_codon	10976..10978(+)		WP_011166241.1	ABC transporter ATP-binding protein	99.3	78.8	41.2
MGA_45	LOCUS_00450	sequence02:11846..12223(+)	internal_stop_codon	12221..12223(+)		WP_003565220.1	peptide deformylase	81.6	57.1	42.5
MGA_54	LOCUS_00540	sequence02:17387..17593(-)	partial			WP_015704781.1	pyridoxal phosphatase	82.4	20.6	57.1
MGA_56	LOCUS_00560	sequence02:17849..18223(-)	partial			WP_002658292.1	HAD family hydrolase	58.9	24.9	37.0
MGA_58	LOCUS_00570	sequence03:876..1121(+)	internal_stop_codon	660..662(+),789..791(+)		WP_008763837.1	thymidine kinase	95.1	39.2	41.0
MGA_59	LOCUS_00580	sequence03:1678..1932(+)	internal_stop_codon	2080..2082(+),1459..1461(+),1930..1932(+),1651..1653(+)		WP_012048370.1	glycine--tRNA ligase	94.0	17.1	83.5
MGA_60	LOCUS_00590	sequence03:2134..2601(+)	internal_stop_codon	1930..1932(+),2080..2082(+)		WP_000287157.1	glycine--tRNA ligase	99.4	33.4	53.9
MGA_61	LOCUS_00600	sequence03:2651..3007(+)	internal_stop_codon	3005..3007(+),3233..3235(+)		WP_011836736.1	DNA primase	71.2	14.0	52.4
MGA_63	LOCUS_00620	sequence03:3437..3940(+)	internal_stop_codon	3233..3235(+)		WP_164919807.1	DNA primase	82.6	21.8	33.1
MGA_66	LOCUS_00650	sequence03:5372..5578(+)	internal_stop_codon	5579..5581(+),5576..5578(+)		WP_023173878.1	RNA polymerase sigma factor RpoD	89.7	15.1	62.3
MGA_67	LOCUS_00660	sequence03:5606..6157(+)	internal_stop_codon	5579..5581(+),5576..5578(+)		WP_017869017.1	RNA polymerase sigma factor RpoD	98.9	27.5	48.1
MGA_68	LOCUS_00670	sequence03:6399..6893(+)	internal_stop_codon	6900..6902(+),6342..6344(+),6891..6893(+)		WP_011166652.1	Nif3-like dinuclear metal center hexameric protein	91.5	58.1	32.7
MGA_84	LOCUS_00820	sequence04:2029..2196(-)	internal_stop_codon	2029..2031(-),1954..1956(-),1942..1944(-),2233..2235(-)		WP_003245843.1	PolC-type DNA polymerase III	94.5	3.6	65.4
MGA_85	LOCUS_00830	sequence04:2233..2517(-)	internal_stop_codon	1954..1956(-),2572..2574(-),2029..2031(-),1942..1944(-),2233..2235(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.2	62.8
MGA_86	LOCUS_00840	sequence04:2572..3102(-)	internal_stop_codon	2572..2574(-),3190..3192(-)		WP_000059989.1	PolC-type DNA polymerase III	100.0	12.3	58.5
MGA_87	LOCUS_00850	sequence04:3190..3468(-)	internal_stop_codon	3190..3192(-)		WP_003547817.1	PolC-type DNA polymerase III	100.0	6.3	46.7
MGA_88	LOCUS_00860	sequence04:4090..4809(-)	internal_stop_codon	4090..4092(-),3886..3888(-)		WP_011183185.1	PolC-type DNA polymerase III	98.7	16.3	37.9
MGA_93	LOCUS_00910	sequence04:7002..7244(+)	internal_stop_codon	7248..7250(+),7242..7244(+)		WP_013448152.1	phosphotransferase	65.0	21.8	55.8
MGA_94	LOCUS_00920	sequence04:8184..8567(-)	internal_stop_codon	8184..8186(-),8115..8117(-),8718..8720(-)		WP_013023147.1	restriction endonuclease subunit S	51.2	15.4	43.9
MGA_96	LOCUS_00940	sequence04:9293..9550(-)	internal_stop_codon	9590..9592(-),9293..9295(-)		WP_011183051.1	energy-coupling factor transporter transmembrane component T	100.0	25.6	72.9
MGA_97	LOCUS_00950	sequence04:9737..10207(-)	internal_stop_codon	9590..9592(-)		WP_002262448.1	energy-coupling factor transporter transmembrane protein EcfT	57.1	32.6	30.3
MGA_98	LOCUS_00960	sequence04:10200..10718(-)	internal_stop_codon	10923..10925(-)		WP_011183050.1	energy-coupling factor transporter ATPase	84.9	46.7	45.6
MGA_99	LOCUS_00970	sequence04:11111..11911(-)	internal_stop_codon	10923..10925(-),11067..11069(-)		WP_011183049.1	energy-coupling factor transporter ATPase	99.6	66.0	51.7
MGA_100	LOCUS_00980	sequence04:12099..12656(+)	internal_stop_codon	12654..12656(+)		WP_003732084.1	DNA polymerase III subunit gamma/tau	99.5	32.3	62.0
MGA_105	LOCUS_01030	sequence04:14639..15106(+)	internal_stop_codon	14612..14614(+)		WP_005626527.1	recombination mediator RecR	97.4	77.5	32.3
MGA_106	LOCUS_01040	sequence04:15121..15369(+)	internal_stop_codon	15367..15369(+)		WP_002356366.1	dTMP kinase	100.0	38.2	48.8
MGA_112	LOCUS_01100	sequence05:2205..2753(+)	internal_stop_codon	2052..2054(+)		WP_011166761.1	RluA family pseudouridine synthase	89.6	52.3	52.4
MGA_117	LOCUS_01150	sequence05:7247..7384(-)	internal_stop_codon	7247..7249(-)		WP_092731919.1	chromosome segregation protein SMC	100.0	3.8	64.4
MGA_119	LOCUS_01170	sequence05:8071..8574(-)	internal_stop_codon	8605..8607(-)		WP_010874903.1	phosphate acyltransferase PlsX	96.4	48.2	40.4
MGA_120	LOCUS_01180	sequence05:8605..9057(-)	internal_stop_codon	8605..8607(-)		WP_011183127.1	phosphate acyltransferase PlsX	97.3	46.8	31.0
MGA_124	LOCUS_01220	sequence05:11861..12343(-)	internal_stop_codon	12482..12484(-),12386..12388(-),12362..12364(-)		WP_000251253.1	DUF402 domain-containing protein	62.5	55.0	35.0
MGA_129	LOCUS_01270	sequence05:15637..16140(+)	internal_stop_codon	16138..16140(+)		WP_000370122.1	Tex family protein	100.0	23.2	41.1
MGA_130	LOCUS_01280	sequence05:16213..17295(+)	internal_stop_codon	16138..16140(+)		WP_000370122.1	Tex family protein	96.1	48.5	52.2
MGA_132	LOCUS_01300	sequence06:1563..1796(-)	internal_stop_codon	1812..1814(-),1563..1565(-)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	16.0	63.6
MGA_133	LOCUS_01310	sequence06:1812..2273(-)	internal_stop_codon	1812..1814(-),2325..2327(-),1563..1565(-)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	31.8	71.2
MGA_134	LOCUS_01320	sequence06:2325..2471(-)	internal_stop_codon	2325..2327(-)		WP_011167116.1	ABC transporter ATP-binding protein	93.8	9.4	66.7
MGA_136	LOCUS_01340	sequence06:2771..3043(-)	internal_stop_codon	3086..3088(-),3143..3145(-),3176..3178(-)		WP_011167115.1	ABC transporter permease	97.8	26.2	65.9
MGA_140	LOCUS_01380	sequence06:4072..4371(-)	internal_stop_codon	4453..4455(-),4072..4074(-),4372..4374(-)		WP_011167114.1	ABC transporter permease	100.0	27.7	62.6
MGA_143	LOCUS_01410	sequence06:5304..5864(-)	internal_stop_codon	5193..5195(-),5076..5078(-),6000..6002(-)		WP_011167113.1	ABC transporter substrate-binding protein	77.4	15.2	30.5
MGA_145	LOCUS_01430	sequence06:6441..6917(-)	internal_stop_codon	6441..6443(-),6207..6209(-),6180..6182(-),6381..6383(-)		WP_011167113.1	ABC transporter substrate-binding protein	86.7	13.8	36.4
MGA_150	LOCUS_01480	sequence06:8572..9291(-)	internal_stop_codon	8572..8574(-)		WP_011167112.1	PDxFFG protein	48.5	5.9	38.8
MGA_153	LOCUS_01510	sequence06:11026..11820(-)	internal_stop_codon	11026..11028(-)		WP_011167112.1	PDxFFG protein	76.9	10.1	36.2
MGA_169	LOCUS_01660	sequence07:4438..5079(-)	internal_stop_codon	5080..5082(-)		WP_011167040.1	F0F1 ATP synthase subunit alpha	100.0	40.6	69.0
MGA_170	LOCUS_01670	sequence07:5080..5826(-)	internal_stop_codon	5080..5082(-)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	47.2	59.7
MGA_171	LOCUS_01680	sequence07:5830..6132(-)	frameshift,internal_stop_codon	6117..6119(-),6129..6131(-)	6192,6110	WP_010874958.1	ATP synthase F1 subunit delta	88.0	56.2	32.0
MGA_174	LOCUS_01710	sequence07:6954..7277(-)	partial			WP_011167043.1	ATP synthase subunit C	57.0	60.4	52.5
MGA_175	LOCUS_01720	sequence07:7293..7661(-)	internal_stop_codon	7719..7721(-),7680..7682(-)		WP_003437836.1	F0F1 ATP synthase subunit A	72.1	35.9	42.0
MGA_178	LOCUS_01750	sequence07:8669..9517(-)	partial			WP_207280506.1	glucose-specific PTS transporter subunit IIBC	76.2	27.9	33.0
MGA_179	LOCUS_01760	sequence07:9754..11181(-)	partial			WP_011166766.1	cell division protein FtsZ	63.6	77.5	41.3
MGA_186	LOCUS_01830	sequence07:15339..15716(-)	internal_stop_codon	15720..15722(-)		WP_000021865.1	TrkH family potassium uptake protein	82.4	21.7	37.9
MGA_188	LOCUS_01850	sequence08:837..1472(-)	internal_stop_codon	837..839(-)		WP_010947586.1	trigger factor	93.8	44.0	36.5
MGA_189	LOCUS_01860	sequence08:1588..2394(-)	internal_stop_codon	2554..2556(-)		WP_011183097.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	85.8	69.5	37.4
MGA_190	LOCUS_01870	sequence08:2800..3021(+)	internal_stop_codon	3139..3141(+),3181..3183(+),3019..3021(+),3145..3147(+)		WP_012048157.1	valine--tRNA ligase	100.0	8.4	54.1
MGA_191	LOCUS_01880	sequence08:3385..3867(+)	internal_stop_codon	3970..3972(+),3139..3141(+),4012..4014(+),4015..4017(+),3991..3993(+),3181..3183(+),4036..4038(+),4090..4092(+),3319..3321(+),3865..3867(+),4120..4122(+),3145..3147(+)		WP_004082363.1	valine--tRNA ligase	96.2	17.9	41.9
MGA_192	LOCUS_01890	sequence08:4249..4413(+)	internal_stop_codon	4012..4014(+),4411..4413(+),4015..4017(+),3991..3993(+),4480..4482(+),4036..4038(+),4159..4161(+),4090..4092(+),4237..4239(+),4687..4689(+),4570..4572(+),4120..4122(+),4501..4503(+)		WP_004398606.1	valine--tRNA ligase	100.0	6.1	72.2
MGA_195	LOCUS_01920	sequence08:6130..6852(+)	internal_stop_codon	6850..6852(+)		WP_013447579.1	6-phosphofructokinase	100.0	73.9	55.5
MGA_202	LOCUS_01990	sequence08:9896..11704(+)	internal_stop_codon	11702..11704(+)		WP_011183564.1	ABC transporter ATP-binding protein	52.5	62.6	49.2
MGA_203	LOCUS_02000	sequence08:11813..12256(+)	internal_stop_codon	11702..11704(+)		WP_011166221.1	ABC transporter ATP-binding protein	89.8	23.4	47.7
MGA_204	LOCUS_02010	sequence08:12433..12813(+)	internal_stop_codon	12811..12813(+),13003..13005(+),12835..12837(+)		WP_002679664.1	ABC transporter permease	94.4	31.2	44.5
MGA_210	LOCUS_02070	sequence09:587..1270(-)	internal_stop_codon	1406..1408(-)		WP_002288799.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	97.4	37.1	44.3
MGA_211	LOCUS_02080	sequence09:1406..2428(-)	internal_stop_codon	1406..1408(-)		WP_003226825.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	97.6	52.7	51.2
MGA_220	LOCUS_02170	sequence09:8367..8630(+)	internal_stop_codon	8148..8150(+),8628..8630(+),8217..8219(+),8358..8360(+)		WP_000638280.1	cardiolipin synthase	92.0	15.1	37.5
MGA_225	LOCUS_02220	sequence09:10353..13208(+)	partial			WP_011254514.1	DUF1542 domain-containing protein	85.6	28.2	21.9
MGA_228	LOCUS_02250	sequence10:672..1238(-)	internal_stop_codon	672..674(-)		WP_010989711.1	ribonuclease HIII	94.1	55.8	37.2
MGA_229	LOCUS_02260	sequence10:1349..1570(-)	partial			WP_000766420.1	Cof-type HAD-IIB family hydrolase	90.4	22.4	45.5
MGA_232	LOCUS_02290	sequence10:2443..2610(+)	internal_stop_codon	2608..2610(+)		WP_002894857.1	UMP kinase	96.4	21.6	54.7
MGA_233	LOCUS_02300	sequence10:2668..3159(+)	internal_stop_codon	2608..2610(+)		WP_002293877.1	UMP kinase	98.8	66.7	53.4
MGA_236	LOCUS_02330	sequence10:4067..5053(+)	internal_stop_codon	5051..5053(+),3977..3979(+)		WP_003131240.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	98.8	72.5	40.7
MGA_237	LOCUS_02340	sequence10:5139..5456(+)	internal_stop_codon	5454..5456(+)		WP_000871089.1	TatD family hydrolase	92.4	37.7	39.0
MGA_238	LOCUS_02350	sequence10:5700..5942(+)	internal_stop_codon	5649..5651(+),5454..5456(+)		WP_002458670.1	TatD family hydrolase	95.0	29.7	38.2
MGA_239	LOCUS_02360	sequence10:5942..6535(+)	internal_stop_codon	6533..6535(+)		WP_002991156.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	91.9	65.9	44.5
MGA_250	LOCUS_02470	sequence10:11593..11901(+)	internal_stop_codon	11899..11901(+)		WP_011166360.1	30S ribosomal protein S7	98.0	64.5	65.0
MGA_251	LOCUS_02480	sequence10:11905..12060(+)	internal_stop_codon	11899..11901(+)		WP_001137495.1	30S ribosomal protein S7	100.0	32.7	76.5
MGA_252	LOCUS_02490	sequence10:12089..12244(+)	internal_stop_codon	12302..12304(+),12446..12448(+),12242..12244(+)		WP_011166361.1	elongation factor G	100.0	7.4	88.2
MGA_255	LOCUS_02510	sequence11:952..1158(+)	frameshift,internal_stop_codon	913..915(+),1157..1159(+),1175..1177(+),829..831(+)	933,879	WP_011836521.1	pullulanase	82.4	4.5	52.5
MGA_257	LOCUS_02530	sequence11:1421..1600(+)	frameshift,internal_stop_codon	1174..1176(+),1598..1600(+)	1449	WP_003549917.1	type I pullulanase	81.4	4.1	45.8
MGA_260	LOCUS_02560	sequence11:2521..2667(+)	internal_stop_codon	2734..2736(+),2848..2850(+),2665..2667(+),2902..2904(+)		WP_011860825.1	alpha-glucosidase	100.0	8.7	68.8
MGA_262	LOCUS_02580	sequence11:4169..5233(+)	internal_stop_codon	5438..5440(+),5396..5398(+),5408..5410(+),5231..5233(+)		WP_010990086.1	glycoside hydrolase family 65 protein	97.2	43.3	32.0
MGA_263	LOCUS_02590	sequence11:5567..6319(+)	frameshift,internal_stop_codon	5438..5440(+),6317..6319(+),5396..5398(+),6362..6364(+),5408..5410(+)	6400	WP_002288124.1	glycosyl hydrolase family 65 protein	99.6	31.6	36.9
MGA_264	LOCUS_02600	sequence11:6813..7196(+)	internal_stop_codon	6807..6809(+),6600..6602(+)		WP_011476249.1	beta-phosphoglucomutase	92.9	52.0	53.4
MGA_268	LOCUS_02640	sequence11:9593..9868(-)	internal_stop_codon	9593..9595(-),9515..9517(-)		WP_003549147.1	sucrose-6-phosphate hydrolase	56.0	10.5	49.0
MGA_272	LOCUS_02680	sequence11:11203..11388(+)	internal_stop_codon	11161..11163(+),10942..10944(+),11005..11007(+),11434..11436(+),11386..11388(+)		WP_003641781.1	sucrose-specific PTS transporter subunit IIBC	93.4	8.8	56.1
MGA_273	LOCUS_02690	sequence11:11809..12297(+)	internal_stop_codon	12538..12540(+),12295..12297(+)		WP_011948032.1	ribonuclease R	97.5	19.9	29.7
MGA_275	LOCUS_02710	sequence11:12568..14031(+)	internal_stop_codon	12538..12540(+)		WP_003228386.1	ribonuclease R	99.8	62.0	37.8
MGA_276	LOCUS_02720	sequence11:13997..14344(+)	internal_stop_codon	14342..14344(+)		WP_011183570.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	84.3	39.6	43.3
MGA_278	LOCUS_02740	sequence11:15726..16121(+)	internal_stop_codon	15441..15443(+),16119..16121(+),15486..15488(+),15699..15701(+),15639..15641(+),15570..15572(+)		WP_001051129.1	methionine--tRNA ligase	100.0	20.1	37.9
MGA_287	LOCUS_02830	sequence11:20598..21035(+)	internal_stop_codon	21033..21035(+)		WP_010874491.1	ABC transporter ATP-binding protein	69.0	17.1	63.0
MGA_288	LOCUS_02840	sequence11:21297..22127(+)	internal_stop_codon	22125..22127(+)		WP_010874491.1	ABC transporter ATP-binding protein	80.4	35.5	37.4
MGA_289	LOCUS_02850	sequence11:22194..22685(+)	internal_stop_codon	22125..22127(+)		WP_010874491.1	ABC transporter ATP-binding protein	96.3	26.5	36.9
MGA_290	LOCUS_02860	sequence11:23296..23670(+)	internal_stop_codon	23191..23193(+),23074..23076(+),23254..23256(+)		WP_010874492.1	sugar ABC transporter permease	91.1	34.0	46.0
MGA_293	LOCUS_02890	sequence11:24176..24448(+)	internal_stop_codon	24140..24142(+),24119..24121(+),24461..24463(+),24515..24517(+),24446..24448(+)		WP_010874493.1	carbohydrate ABC transporter permease	81.1	23.2	47.3
MGA_301	LOCUS_02970	sequence11:28482..28853(+)	internal_stop_codon	28851..28853(+),28914..28916(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	97.6	38.0	50.4
MGA_303	LOCUS_02990	sequence11:29447..29824(+)	internal_stop_codon	29250..29252(+),29885..29887(+),30077..30079(+),29385..29387(+),29822..29824(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	92.8	36.4	54.2
MGA_306	LOCUS_03020	sequence11:31350..31604(+)	internal_stop_codon	31602..31604(+),31290..31292(+)		WP_011475547.1	DUF4256 domain-containing protein	100.0	45.7	39.3
MGA_307	LOCUS_03030	sequence11:31929..32216(+)	internal_stop_codon	32214..32216(+)		WP_010905311.1	glutamyl aminopeptidase	92.6	24.8	43.2
MGA_308	LOCUS_03040	sequence11:32247..33017(+)	internal_stop_codon	32214..32216(+)		WP_048065828.1	M42 family metallopeptidase	94.9	68.4	38.7
MGA_309	LOCUS_03050	sequence11:33260..34165(+)	internal_stop_codon	34163..34165(+)		WP_010774175.1	phosphoenolpyruvate--protein phosphotransferase	99.0	52.7	47.5
MGA_310	LOCUS_03060	sequence11:34214..34744(+)	internal_stop_codon	34163..34165(+),34742..34744(+)		WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	100.0	30.4	63.1
MGA_311	LOCUS_03070	sequence11:34751..34960(+)	internal_stop_codon	34742..34744(+)		WP_001831740.1	phosphoenolpyruvate--protein phosphotransferase	98.6	11.9	55.9
MGA_313	LOCUS_03090	sequence11:35843..36616(+)	internal_stop_codon	36827..36829(+),36614..36616(+)		WP_002356165.1	pyrimidine-nucleoside phosphorylase	100.0	59.4	65.0
MGA_315	LOCUS_03110	sequence11:36914..37138(+)	internal_stop_codon	36827..36829(+)		WP_010905974.1	pyrimidine-nucleoside phosphorylase	94.6	16.3	52.9
MGA_316	LOCUS_03120	sequence11:37150..37275(+)	internal_stop_codon	37273..37275(+)		WP_011183018.1	deoxyribose-phosphate aldolase	97.6	18.2	60.0
MGA_317	LOCUS_03130	sequence11:37351..37812(+)	internal_stop_codon	37273..37275(+)		WP_011183018.1	deoxyribose-phosphate aldolase	98.7	68.6	54.3
MGA_318	LOCUS_03140	sequence11:37873..38091(+)	internal_stop_codon	38089..38091(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	95.8	26.6	53.6
MGA_321	LOCUS_03170	sequence12:266..505(+)	internal_stop_codon	503..505(+)		WP_011166497.1	ribonuclease J	100.0	13.6	53.2
MGA_322	LOCUS_03180	sequence12:512..1918(+)	internal_stop_codon	503..505(+)		WP_003640800.1	ribonuclease J	91.0	74.6	24.8
MGA_328	LOCUS_03240	sequence12:5170..5445(+)	internal_stop_codon	5014..5016(+),5068..5070(+)		WP_000024418.1	50S ribosomal protein L4	95.6	42.0	36.0
MGA_331	LOCUS_03270	sequence12:7314..7514(+)	internal_stop_codon	7233..7235(+)		WP_011183025.1	50S ribosomal protein L22	93.9	55.4	67.7
MGA_332	LOCUS_03280	sequence12:7880..8128(+)	internal_stop_codon	8126..8128(+)		WP_002356207.1	30S ribosomal protein S3	98.8	37.2	66.7
MGA_337	LOCUS_03330	sequence12:9447..9770(+)	partial			WP_003427723.1	50S ribosomal protein L24	63.6	67.3	48.5
MGA_338	LOCUS_03340	sequence12:9773..9997(+)	internal_stop_codon	10055..10057(+),9995..9997(+)		WP_000013545.1	50S ribosomal protein L5	97.3	40.0	59.7
MGA_339	LOCUS_03350	sequence12:10088..10318(+)	internal_stop_codon	10055..10057(+),9995..9997(+)		WP_003435673.1	50S ribosomal protein L5	94.7	40.0	65.3
MGA_346	LOCUS_03420	sequence12:12674..12889(+)	internal_stop_codon	12617..12619(+)		WP_005899800.1	50S ribosomal protein L15	95.8	43.4	43.5
MGA_362	LOCUS_03570	sequence13:9663..10103(-)	internal_stop_codon	10116..10118(-)		WP_011166894.1	preprotein translocase subunit SecY	81.5	24.7	31.9
MGA_363	LOCUS_03580	sequence13:10116..10898(-)	internal_stop_codon	10116..10118(-)		WP_010874541.1	preprotein translocase subunit SecY	98.5	52.8	35.1
MGA_374	LOCUS_03680	sequence14:7940..8197(+)	internal_stop_codon	8195..8197(+)		WP_010874574.1	ABC transporter ATP-binding protein	95.3	18.9	49.4
MGA_375	LOCUS_03690	sequence14:8429..8710(+)	internal_stop_codon	8195..8197(+),8897..8899(+),8708..8710(+)		WP_010874574.1	ABC transporter ATP-binding protein	100.0	22.0	58.1
MGA_376	LOCUS_03700	sequence14:8780..8899(+)	internal_stop_codon	8897..8899(+),8708..8710(+)		WP_003566704.1	ABC transporter ATP-binding protein	89.7	10.0	71.4
MGA_377	LOCUS_03710	sequence14:8982..9389(+)	partial			WP_003548861.1	ATP-binding cassette domain-containing protein	88.9	37.9	48.3
MGA_380	LOCUS_03740	sequence14:11085..11387(+)	partial			WP_000786734.1	ATP-binding cassette domain-containing protein	97.0	30.0	41.2
MGA_384	LOCUS_03780	sequence15:1147..1527(-)	partial			WP_010874739.1	HAD family hydrolase	89.7	40.1	31.9
MGA_386	LOCUS_03800	sequence15:1691..2101(-)	internal_stop_codon	1691..1693(-),2138..2140(-)		WP_002262722.1	L-ribulose-5-phosphate 4-epimerase	100.0	57.6	64.0
MGA_387	LOCUS_03810	sequence15:2605..2934(-)	internal_stop_codon	2962..2964(-),2542..2544(-),2605..2607(-)		WP_005693360.1	L-ribulose-5-phosphate 3-epimerase	95.4	36.4	60.6
MGA_388	LOCUS_03820	sequence15:2962..3120(-)	internal_stop_codon	2962..2964(-)		WP_010874848.1	L-ribulose-5-phosphate 3-epimerase	96.2	16.4	62.0
MGA_389	LOCUS_03830	sequence15:3134..3295(-)	internal_stop_codon	3335..3337(-),3404..3406(-),3374..3376(-)		WP_000056755.1	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	73.6	18.1	79.5
MGA_390	LOCUS_03840	sequence15:3404..3784(-)	internal_stop_codon	3335..3337(-),3404..3406(-),3374..3376(-)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	57.8	55.6
MGA_391	LOCUS_03850	sequence15:3804..4082(-)	internal_stop_codon	4212..4214(-)		WP_012027941.1	PTS sugar transporter subunit IIA	97.8	55.3	41.1
MGA_394	LOCUS_03880	sequence15:4796..5239(-)	internal_stop_codon	5333..5335(-),5360..5362(-),5309..5311(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	81.0	17.7	62.2
MGA_395	LOCUS_03890	sequence15:5360..5566(-)	internal_stop_codon	5645..5647(-),5333..5335(-),5810..5812(-),5360..5362(-),5309..5311(-),5720..5722(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	80.9	8.3	52.7
MGA_396	LOCUS_03900	sequence15:5927..6196(-)	internal_stop_codon	5645..5647(-),5720..5722(-),5927..5929(-),5810..5812(-)		WP_010874852.1	PTS ascorbate transporter subunit IIC	96.6	13.2	47.1
MGA_397	LOCUS_03910	sequence15:6380..7075(-)	internal_stop_codon	7109..7111(-),7118..7120(-)		WP_205842938.1	phosphotriesterase	94.4	62.1	83.9
MGA_398	LOCUS_03920	sequence15:7118..7435(-)	internal_stop_codon	7109..7111(-),7118..7120(-)		WP_205842938.1	phosphotriesterase	100.0	29.9	71.4
MGA_401	LOCUS_03950	sequence15:8951..9337(-)	internal_stop_codon	8951..8953(-),9404..9406(-)		WP_002938522.1	ribonuclease J	97.7	22.2	29.6
MGA_402	LOCUS_03960	sequence15:9404..10045(-)	internal_stop_codon	10109..10111(-),9404..9406(-)		WP_001831649.1	ribonuclease J	97.7	37.0	49.0
MGA_403	LOCUS_03970	sequence15:10109..10513(-)	internal_stop_codon	10109..10111(-)		WP_011183468.1	ribonuclease J	94.8	20.2	45.7
MGA_405	LOCUS_03990	sequence16:1002..2429(-)	internal_stop_codon	2445..2447(-),918..920(-),1002..1004(-)		WP_003547478.1	DNA topoisomerase IV subunit A	100.0	57.8	47.9
MGA_406	LOCUS_04000	sequence16:2445..2741(-)	internal_stop_codon	2445..2447(-)		WP_011166695.1	DNA topoisomerase IV subunit A	90.8	9.9	71.9
MGA_407	LOCUS_04010	sequence16:3203..3802(+)	internal_stop_codon	3800..3802(+)		WP_011016236.1	excinuclease ABC subunit UvrB	99.5	29.9	57.6
MGA_408	LOCUS_04020	sequence16:3875..4345(+)	internal_stop_codon	3800..3802(+),4343..4345(+)		WP_010963824.1	excinuclease ABC subunit UvrB	98.7	23.1	57.1
MGA_409	LOCUS_04030	sequence16:4571..5194(+)	internal_stop_codon	4343..4345(+)		WP_001829601.1	excinuclease ABC subunit UvrB	99.0	30.3	52.4
MGA_411	LOCUS_04050	sequence16:5894..6598(+)	internal_stop_codon	6755..6757(+),6596..6598(+),6662..6664(+)		WP_010990003.1	excinuclease ABC subunit UvrA	99.6	24.3	51.5
MGA_412	LOCUS_04060	sequence16:6854..7498(+)	internal_stop_codon	6755..6757(+),7496..7498(+),6596..6598(+),6662..6664(+)		WP_003228057.1	excinuclease ABC subunit UvrA	99.5	22.0	62.9
MGA_413	LOCUS_04070	sequence16:7688..8413(+)	internal_stop_codon	8411..8413(+),7496..7498(+)		WP_002485563.1	excinuclease ABC subunit UvrA	98.8	25.5	63.9
MGA_415	LOCUS_04090	sequence16:9047..9490(+)	internal_stop_codon	8927..8929(+),9488..9490(+)		WP_010964404.1	HPr(Ser) kinase/phosphatase	98.6	47.7	45.5
MGA_419	LOCUS_04120	sequence17:161..379(+)	internal_stop_codon	377..379(+)		WP_000003348.1	oligoendopeptidase F	68.1	8.1	53.1
MGA_421	LOCUS_04140	sequence17:1137..1649(+)	internal_stop_codon	1647..1649(+)		WP_000369671.1	lysine--tRNA ligase	99.4	34.5	48.9
MGA_422	LOCUS_04150	sequence17:1704..2459(+)	internal_stop_codon	2457..2459(+),1647..1649(+)		WP_002296055.1	lysine--tRNA ligase	100.0	51.0	57.5
MGA_423	LOCUS_04160	sequence17:2790..4556(-)	partial			WP_011254514.1	DUF1542 domain-containing protein	85.0	22.6	24.7
MGA_431	LOCUS_04240	sequence17:9277..9771(-)	partial			WP_011921980.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	91.5	64.6	39.1
MGA_434	LOCUS_04270	sequence18:1499..1708(+)	internal_stop_codon	1706..1708(+),1493..1495(+),1709..1711(+),1277..1279(+)		WP_002914455.1	endopeptidase	100.0	11.0	66.7
MGA_435	LOCUS_04280	sequence18:1754..2098(+)	internal_stop_codon	1706..1708(+),1493..1495(+),1709..1711(+)		WP_011166866.1	peptidase	100.0	18.1	49.1
MGA_438	LOCUS_04310	sequence18:4482..5021(-)	partial			WP_084400767.1	DEAD/DEAH box helicase family protein	85.5	23.5	27.4
MGA_447	LOCUS_04400	sequence19:1425..2552(-)	internal_stop_codon	1425..1427(-),2583..2585(-)		WP_080388512.1	hyperosmolarity resistance protein Ebh	94.7	3.9	26.7
MGA_448	LOCUS_04410	sequence19:2583..4193(-)	frameshift,internal_stop_codon	2583..2585(-),4347..4349(-),2582..2584(-),2904..2906(-)	2873,2906	WP_080388512.1	hyperosmolarity resistance protein Ebh	98.3	5.0	28.5
MGA_449	LOCUS_04420	sequence19:4347..6188(-)	internal_stop_codon	4347..4349(-)		WP_080388512.1	hyperosmolarity resistance protein Ebh	98.9	6.5	22.5
MGA_454	LOCUS_04460	sequence20:1007..1387(-)	internal_stop_codon	1415..1417(-)		WP_001829595.1	phosphopyruvate hydratase	100.0	29.0	77.8
MGA_455	LOCUS_04470	sequence20:1415..2164(-)	internal_stop_codon	2183..2185(-),1415..1417(-)		WP_003643976.1	phosphopyruvate hydratase	99.2	52.3	55.1
MGA_456	LOCUS_04480	sequence20:2183..2368(-)	internal_stop_codon	2183..2185(-)		WP_003727923.1	phosphopyruvate hydratase	86.9	12.3	77.4
MGA_460	LOCUS_04520	sequence20:4985..5776(+)	internal_stop_codon	5774..5776(+)		WP_008363296.1	DUF4011 domain-containing protein	99.6	16.7	43.2
MGA_461	LOCUS_04530	sequence20:5894..6667(+)	internal_stop_codon	6665..6667(+),5774..5776(+),6695..6697(+),6683..6685(+)		WP_008363296.1	DUF4011 domain-containing protein	93.8	15.1	45.2
MGA_465	LOCUS_04570	sequence20:8514..9287(-)	internal_stop_codon	9312..9314(-),8514..8516(-)		WP_002263383.1	Eco57I restriction-modification methylase domain-containing protein	94.9	53.4	29.1
MGA_483	LOCUS_04720	sequence22:1366..1764(-)	internal_stop_codon	1366..1368(-),1834..1836(-)		WP_010964145.1	class II fructose-1,6-bisphosphate aldolase	99.2	45.3	64.1
MGA_485	LOCUS_04740	sequence22:2329..2925(-)	internal_stop_codon	2956..2958(-)		WP_011183452.1	arginine--tRNA ligase	100.0	37.3	36.9
MGA_486	LOCUS_04750	sequence22:2956..3321(-)	internal_stop_codon	3334..3336(-),2956..2958(-)		WP_011166776.1	arginine--tRNA ligase	99.2	23.5	43.8
MGA_487	LOCUS_04760	sequence22:3334..3981(-)	internal_stop_codon	3334..3336(-)		WP_003723609.1	arginine--tRNA ligase	83.3	33.1	47.8
MGA_488	LOCUS_04770	sequence22:4203..4385(+)	internal_stop_codon	4143..4145(+),4626..4628(+),4383..4385(+)		WP_015369787.1	6-phospho-beta-glucosidase BglA	98.3	12.4	52.5
MGA_489	LOCUS_04780	sequence22:5028..5174(+)	internal_stop_codon	5178..5180(+),4983..4985(+),5397..5399(+),5172..5174(+)		WP_011674395.1	glycoside hydrolase family 1 protein	97.9	9.5	57.4
MGA_490	LOCUS_04790	sequence22:5627..5989(+)	internal_stop_codon	6104..6106(+),6164..6166(+),5987..5989(+)		WP_011182984.1	cysteine--tRNA ligase	100.0	27.2	40.8
MGA_491	LOCUS_04800	sequence22:6317..6769(+)	internal_stop_codon	6104..6106(+),6164..6166(+),6314..6316(+)		WP_010355798.1	cysteine--tRNA ligase	88.7	28.3	30.2
MGA_492	LOCUS_04810	sequence22:6892..7362(+)	internal_stop_codon	7360..7362(+)		WP_002494715.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	100.0	67.9	34.3
MGA_497	LOCUS_04860	sequence22:8889..9206(+)	internal_stop_codon	8880..8882(+)		WP_011167111.1	transcription termination/antitermination protein NusG	84.8	49.3	35.2
MGA_500	LOCUS_04890	sequence22:10769..11590(+)	internal_stop_codon	11603..11605(+),11588..11590(+)		WP_011166855.1	DNA polymerase III subunit alpha	98.2	28.2	27.9
MGA_501	LOCUS_04900	sequence22:11672..13495(+)	internal_stop_codon	11603..11605(+),11588..11590(+)		WP_011166855.1	DNA polymerase III subunit alpha	92.9	58.8	38.9
MGA_503	LOCUS_04920	sequence22:13707..14594(+)	partial			WP_000412819.1	DNA polymerase I	84.1	28.1	37.9
MGA_504	LOCUS_04930	sequence22:14901..15656(+)	partial			WP_003548343.1	DnaD domain protein	60.6	35.0	30.1
MGA_506	LOCUS_04950	sequence22:16832..17359(+)	internal_stop_codon	17357..17359(+)		WP_011183308.1	methionyl-tRNA formyltransferase	98.9	55.9	48.6
MGA_508	LOCUS_04970	sequence22:17847..18104(+)	internal_stop_codon	18102..18104(+)		WP_010964028.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	24.9	61.2
MGA_509	LOCUS_04980	sequence22:18369..18779(+)	internal_stop_codon	18777..18779(+),18102..18104(+)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	40.4	62.5
MGA_514	LOCUS_05030	sequence22:22391..22558(+)	internal_stop_codon	22676..22678(+),22556..22558(+)		WP_005772800.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	98.2	28.0	57.4
MGA_515	LOCUS_05040	sequence22:22917..23234(+)	partial			WP_002288467.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	92.4	21.7	33.3
MGA_516	LOCUS_05050	sequence22:23544..24059(+)	internal_stop_codon	24057..24059(+)		WP_010964744.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	92.4	36.6	32.7
MGA_517	LOCUS_05060	sequence22:24747..25100(+)	internal_stop_codon	25098..25100(+)		WP_009994768.1	helix-turn-helix domain-containing protein	96.6	24.0	54.9
MGA_518	LOCUS_05070	sequence22:25296..26249(+)	internal_stop_codon	25098..25100(+)		WP_011016217.1	putative DNA binding domain-containing protein	95.0	61.0	54.6
MGA_519	LOCUS_05080	sequence22:26603..26734(+)	internal_stop_codon	26996..26998(+),27008..27010(+),26732..26734(+)		WP_010922104.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	95.3	6.3	75.6
MGA_520	LOCUS_05090	sequence22:26765..26998(+)	internal_stop_codon	26996..26998(+),27008..27010(+),26732..26734(+)		WP_011166217.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	98.7	12.0	68.4
MGA_521	LOCUS_05100	sequence22:27146..28393(+)	internal_stop_codon	26996..26998(+),27008..27010(+),28391..28393(+)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.8	63.5	55.5
MGA_522	LOCUS_05110	sequence22:28403..28555(+)	internal_stop_codon	28391..28393(+)		WP_011405125.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	92.0	7.1	73.9
MGA_524	LOCUS_05130	sequence22:30102..30509(-)	internal_stop_codon	30519..30521(-)		WP_010874594.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	89.6	26.4	31.0
MGA_525	LOCUS_05140	sequence22:30519..31427(-)	internal_stop_codon	30519..30521(-)		WP_011183059.1	amidase family protein	94.0	60.0	42.1
MGA_529	LOCUS_05180	sequence22:33998..34684(-)	internal_stop_codon	34712..34714(-),34688..34690(-)		WP_020862806.1	lysophospholipid acyltransferase family protein	99.1	70.2	31.6
MGA_532	LOCUS_05210	sequence23:719..1039(-)	internal_stop_codon	719..721(-),1064..1066(-)		WP_010874566.1	cation-transporting P-type ATPase	100.0	12.4	47.2
MGA_533	LOCUS_05220	sequence23:1064..1330(-)	internal_stop_codon	1442..1444(-),1064..1066(-)		WP_010989583.1	cation-translocating P-type ATPase	100.0	10.0	58.0
MGA_534	LOCUS_05230	sequence23:1442..1993(-)	internal_stop_codon	1442..1444(-),2039..2041(-)		WP_011948276.1	calcium-translocating P-type ATPase, SERCA-type	94.5	20.0	45.3
MGA_535	LOCUS_05240	sequence23:2039..2671(-)	internal_stop_codon	2687..2689(-),2039..2041(-)		WP_002377094.1	cation-translocating P-type ATPase	88.6	20.5	40.9
MGA_536	LOCUS_05250	sequence23:2687..2881(-)	internal_stop_codon	2687..2689(-)		WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	60.9	4.4	59.0
MGA_550	LOCUS_05380	sequence24:2709..3440(+)	internal_stop_codon	3438..3440(+)		WP_080388512.1	hyperosmolarity resistance protein Ebh	95.1	2.5	24.8
MGA_553	LOCUS_05410	sequence24:4689..5306(+)	internal_stop_codon	4575..4577(+),5304..5306(+)		WP_080388512.1	hyperosmolarity resistance protein Ebh	95.6	1.8	22.2
MGA_554	LOCUS_05420	sequence24:5541..7379(+)	internal_stop_codon	5304..5306(+)		WP_011254514.1	DUF1542 domain-containing protein	97.5	26.1	21.2
MGA_555	LOCUS_05430	sequence24:8030..8917(-)	internal_stop_codon	8030..8032(-),8012..8014(-)		WP_005815179.1	redox-regulated ATPase YchF	100.0	80.6	48.0
MGA_556	LOCUS_05440	sequence24:9049..9528(-)	partial			WP_001830175.1	excinuclease ABC subunit UvrC	87.4	24.2	37.5
MGA_557	LOCUS_05450	sequence25:404..916(-)	internal_stop_codon	917..919(-),404..406(-)		WP_011183378.1	asparagine--tRNA ligase	99.4	38.1	49.1
MGA_558	LOCUS_05460	sequence25:917..1348(-)	internal_stop_codon	1538..1540(-),917..919(-),1562..1564(-)		WP_002665039.1	asparagine--tRNA ligase	90.9	30.3	56.3
MGA_563	LOCUS_05510	sequence25:3763..4401(-)	internal_stop_codon	3676..3678(-),3763..3765(-),4612..4614(-)		WP_011166299.1	preprotein translocase subunit SecA	99.5	22.1	41.3
MGA_564	LOCUS_05520	sequence25:4612..5850(-)	internal_stop_codon	4612..4614(-)		WP_011254222.1	preprotein translocase subunit SecA	99.3	52.8	54.3
MGA_565	LOCUS_05530	sequence25:6035..6313(+)	internal_stop_codon	6311..6313(+)		WP_012048270.1	tryptophan--tRNA ligase	97.8	26.8	55.6
MGA_566	LOCUS_05540	sequence25:6317..7030(+)	internal_stop_codon	6311..6313(+)		WP_000110984.1	tryptophan--tRNA ligase	100.0	70.8	45.8
MGA_567	LOCUS_05550	sequence25:7046..7477(+)	internal_stop_codon	7475..7477(+),7658..7660(+),7526..7528(+)		WP_012583388.1	threonine--tRNA ligase	93.7	20.7	41.4
MGA_568	LOCUS_05560	sequence25:7673..8179(+)	internal_stop_codon	7475..7477(+),7658..7660(+),7526..7528(+),8177..8179(+)		WP_011183074.1	threonine--tRNA ligase	90.5	24.1	50.3
MGA_569	LOCUS_05570	sequence25:8273..8485(+)	internal_stop_codon	8483..8485(+),8177..8179(+)		WP_011166459.1	threonine--tRNA ligase	98.6	10.8	71.0
MGA_576	LOCUS_05640	sequence26:3176..3562(-)	internal_stop_codon	3008..3010(-),3176..3178(-)		WP_003234424.1	phosphoglycolate phosphatase	88.3	44.6	33.6
MGA_578	LOCUS_05660	sequence26:3765..4403(-)	partial			WP_011016546.1	tRNA pseudouridine(55) synthase TruB	92.0	67.6	38.8
MGA_580	LOCUS_05680	sequence26:5142..5372(+)	partial			WP_011166505.1	protein phosphatase 2C domain-containing protein	60.5	33.3	42.6
MGA_581	LOCUS_05690	sequence26:5439..5918(+)	internal_stop_codon	5370..5372(+)		WP_011183117.1	protein phosphatase 2C domain-containing protein	93.1	58.7	34.0
MGA_582	LOCUS_05700	sequence26:5911..6702(+)	internal_stop_codon	6700..6702(+)		WP_011101478.1	Stk1 family PASTA domain-containing Ser/Thr kinase	97.0	38.1	40.3
MGA_584	LOCUS_05720	sequence26:7857..8414(+)	internal_stop_codon	7839..7841(+)		WP_003431138.1	ribulose-phosphate 3-epimerase	95.7	78.9	38.5
MGA_585	LOCUS_05730	sequence27:184..405(-)	internal_stop_codon	559..561(-)		WP_011166468.1	DUF31 family protein	100.0	10.6	49.3
MGA_592	LOCUS_05800	sequence27:2718..3029(-)	internal_stop_codon	3036..3038(-)		WP_011166809.1	DUF31 family protein	98.1	11.5	49.5
MGA_594	LOCUS_05820	sequence27:3276..4166(-)	internal_stop_codon	3276..3278(-),4194..4196(-),3036..3038(-),4242..4244(-)		WP_205842899.1	DUF31 family protein	63.5	24.8	28.7
MGA_597	LOCUS_05850	sequence27:6613..7869(-)	internal_stop_codon	6424..6426(-),6613..6615(-)		WP_011166795.1	ATP F0F1 synthase subunit alpha	99.3	80.4	54.2
MGA_600	LOCUS_05880	sequence28:505..1299(-)	internal_stop_codon	1306..1308(-)		WP_002456664.1	M42 family metallopeptidase	97.7	72.6	31.5
MGA_601	LOCUS_05890	sequence28:1306..1587(-)	internal_stop_codon	1306..1308(-)		WP_012583847.1	M42 family metallopeptidase	95.7	24.9	41.6
MGA_607	LOCUS_05950	sequence28:3362..5290(-)	internal_stop_codon	5522..5524(-),5396..5398(-)		WP_011166380.1	alanine--tRNA ligase	96.9	72.7	35.6
MGA_608	LOCUS_05960	sequence28:5582..5728(-)	internal_stop_codon	5522..5524(-),5396..5398(-),5582..5584(-),5876..5878(-),5957..5959(-)		WP_010880825.1	alanine--tRNA ligase	91.7	5.1	72.7
MGA_609	LOCUS_05970	sequence28:6007..6726(-)	internal_stop_codon	6865..6867(-),7012..7014(-)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	95.0	63.9	56.1
MGA_610	LOCUS_05980	sequence28:7315..7818(+)	partial			WP_002359609.1	beta-glucoside-specific PTS transporter subunit IIABC	88.6	23.0	43.3
MGA_615	LOCUS_06030	sequence29:1818..1970(+)	internal_stop_codon	1968..1970(+)		WP_000246611.1	type I DNA topoisomerase	92.0	6.1	60.9
MGA_616	LOCUS_06040	sequence29:2103..2480(+)	internal_stop_codon	2478..2480(+)		WP_002210622.1	type I DNA topoisomerase	79.2	11.0	49.5
MGA_617	LOCUS_06050	sequence29:2892..3440(+)	internal_stop_codon	2769..2771(+)		WP_004082962.1	type I DNA topoisomerase	96.7	28.0	30.5
MGA_619	LOCUS_06070	sequence29:4015..4767(+)	internal_stop_codon	4765..4767(+)		WP_010714156.1	5'-nucleotidase C-terminal domain-containing protein	74.0	13.5	38.7
MGA_621	LOCUS_06090	sequence29:5164..5694(+)	partial			WP_012259102.1	5'-nucleotidase C-terminal domain-containing protein	73.3	20.9	38.9
MGA_622	LOCUS_06100	sequence29:5837..6586(-)	internal_stop_codon	6764..6766(-)		WP_011016673.1	NAD(P)/FAD-dependent oxidoreductase	98.4	53.4	57.3
MGA_623	LOCUS_06110	sequence29:6764..7105(-)	internal_stop_codon	6764..6766(-),7184..7186(-)		WP_011016673.1	NAD(P)/FAD-dependent oxidoreductase	99.1	24.4	50.0
MGA_630	LOCUS_06180	sequence30:4283..4834(-)	internal_stop_codon	4283..4285(-)		WP_011183407.1	ABC transporter permease subunit	95.1	15.3	28.6
MGA_631	LOCUS_06190	sequence30:4827..5213(-)	internal_stop_codon	5253..5255(-)		WP_013097090.1	spermidine/putrescine ABC transporter permease PotB	89.1	37.2	30.7
MGA_634	LOCUS_06220	sequence30:6046..6420(-)	partial			WP_003811606.1	ABC transporter ATP-binding protein	92.7	31.8	61.7
MGA_635	LOCUS_06230	sequence30:6625..6819(-)	internal_stop_codon	6838..6840(-)		WP_034286312.1	ABC transporter ATP-binding protein	90.6	16.3	51.7
MGA_636	LOCUS_06240	sequence30:6838..7029(-)	internal_stop_codon	6838..6840(-)		WP_000531581.1	spermidine/putrescine ABC transporter ATP-binding protein PotA	96.8	16.1	49.2
MGA_639	LOCUS_06260	sequence31:815..1189(-)	internal_stop_codon	1247..1249(-),815..817(-)		WP_005813065.1	excinuclease ABC subunit UvrC	90.3	18.4	37.5
MGA_640	LOCUS_06270	sequence31:1372..1602(-)	internal_stop_codon	1612..1614(-)		WP_002295135.1	phosphoglycerate kinase	100.0	19.2	59.2
MGA_641	LOCUS_06280	sequence31:1612..2031(-)	internal_stop_codon	2143..2145(-),1612..1614(-)		WP_003564267.1	phosphoglycerate kinase	100.0	35.4	59.3
MGA_642	LOCUS_06290	sequence31:2143..2556(-)	internal_stop_codon	2143..2145(-)		WP_002357094.1	phosphoglycerate kinase	99.3	34.3	66.2
MGA_649	LOCUS_06360	sequence31:6694..7092(-)	internal_stop_codon	7099..7101(-),6694..6696(-)		WP_000658369.1	nicotinate phosphoribosyltransferase	98.5	34.4	50.7
MGA_650	LOCUS_06370	sequence31:7099..7368(-)	internal_stop_codon	7099..7101(-)		WP_020862883.1	nicotinate phosphoribosyltransferase	97.8	24.9	47.7
MGA_653	LOCUS_06390	sequence32:635..1543(+)	internal_stop_codon	527..529(+),461..463(+)		WP_011963044.1	aldehyde dehydrogenase	99.7	69.9	28.3
MGA_657	LOCUS_06430	sequence32:3216..3806(-)	internal_stop_codon	3849..3851(-)		WP_011815343.1	DNA helicase II	79.1	19.7	35.9
MGA_658	LOCUS_06440	sequence32:4413..4616(-)	internal_stop_codon	4641..4643(-),4413..4415(-)		WP_012804532.1	UvrD-helicase domain-containing protein	100.0	7.2	52.2
MGA_659	LOCUS_06450	sequence32:4968..5414(-)	internal_stop_codon	4968..4970(-)		WP_009888186.1	DUF3553 domain-containing protein	94.6	18.7	46.8
MGA_674	LOCUS_06600	sequence33:10929..14726(-)	partial			WP_080388512.1	hyperosmolarity resistance protein Ebh	97.9	12.6	18.7
MGA_676	LOCUS_06620	sequence33:17791..17964(+)	internal_stop_codon	17962..17964(+),17761..17763(+)		WP_003422928.1	histidine--tRNA ligase	94.7	12.9	74.1
MGA_677	LOCUS_06630	sequence33:18001..19029(+)	internal_stop_codon	17962..17964(+),17761..17763(+)		WP_002289103.1	histidine--tRNA ligase	81.9	63.7	37.0
MGA_678	LOCUS_06640	sequence33:19400..20209(+)	internal_stop_codon	20291..20293(+),20255..20257(+),20207..20209(+),20243..20245(+),20216..20218(+)		WP_027480025.1	aspartate--tRNA ligase	99.3	46.4	45.9
MGA_679	LOCUS_06650	sequence33:20351..20725(+)	internal_stop_codon	20291..20293(+),20255..20257(+),20207..20209(+),20243..20245(+),20216..20218(+)		WP_000840888.1	aspartate--tRNA ligase	97.6	20.5	56.2
MGA_680	LOCUS_06660	sequence33:20983..21159(-)	internal_stop_codon	21352..21354(-),20983..20985(-)		WP_011476014.1	serine hydroxymethyltransferase	93.1	12.9	53.7
MGA_681	LOCUS_06670	sequence33:21352..22101(-)	internal_stop_codon	21352..21354(-)		WP_002858710.1	serine hydroxymethyltransferase	98.0	58.9	57.8
MGA_685	LOCUS_06710	sequence33:23901..24281(-)	internal_stop_codon	23901..23903(-)		WP_004599463.1	phenylalanine--tRNA ligase subunit beta	97.6	15.3	31.7
MGA_687	LOCUS_06730	sequence33:24634..24972(-)	internal_stop_codon	24634..24636(-),24598..24600(-),24553..24555(-)		WP_003018069.1	uracil-DNA glycosylase	86.6	43.2	45.4
MGA_688	LOCUS_06740	sequence33:24962..25135(-)	internal_stop_codon	25277..25279(-),25157..25159(-)		WP_004398818.1	phenylalanine--tRNA ligase subunit alpha	93.0	15.4	54.7
MGA_689	LOCUS_06750	sequence33:25277..25495(-)	internal_stop_codon	25277..25279(-),25598..25600(-),25157..25159(-)		WP_011183298.1	phenylalanine--tRNA ligase subunit alpha	98.6	22.0	49.4
MGA_690	LOCUS_06760	sequence33:25598..25918(-)	internal_stop_codon	25598..25600(-)		WP_011183298.1	phenylalanine--tRNA ligase subunit alpha	95.3	29.4	28.2
MGA_693	LOCUS_06790	sequence33:28186..28455(+)	internal_stop_codon	28453..28455(+),28027..28029(+),28669..28671(+)		WP_011166866.1	peptidase	88.8	12.5	44.3
MGA_695	LOCUS_06810	sequence33:28675..28884(+)	internal_stop_codon	29098..29100(+),28882..28884(+),28885..28887(+),29086..29088(+),28453..28455(+),28669..28671(+)		WP_002286747.1	peptidase M13	100.0	10.9	75.4
MGA_707	LOCUS_06920	sequence34:505..1350(-)	partial			WP_004083002.1	ABC transporter ATP-binding protein	98.2	45.5	50.7
MGA_708	LOCUS_06930	sequence34:1552..2064(-)	internal_stop_codon	1552..1554(-),2248..2250(-)		WP_002262898.1	ABC transporter ATP-binding protein	95.9	27.6	31.9
MGA_709	LOCUS_06940	sequence34:2437..3384(-)	internal_stop_codon	2437..2439(-),3478..3480(-)		WP_000834766.1	ABC transporter ATP-binding protein	94.0	49.3	38.9
MGA_712	LOCUS_06970	sequence34:5177..5611(+)	internal_stop_codon	5642..5644(+),5609..5611(+)		WP_011460204.1	(d)CMP kinase	100.0	62.5	39.7
MGA_714	LOCUS_06990	sequence34:5847..5987(+)	internal_stop_codon	6234..6236(+),5985..5987(+)		WP_010942865.1	ribosome biogenesis GTPase Der	91.3	9.6	73.8
MGA_716	LOCUS_07010	sequence34:6870..7154(+)	internal_stop_codon	6798..6800(+),6720..6722(+)		WP_011183096.1	ribosome biogenesis GTPase Der	95.7	20.7	50.0
MGA_717	LOCUS_07020	sequence35:227..400(+)	internal_stop_codon	398..400(+)		WP_011836412.1	low temperature requirement protein A	93.0	13.9	49.1
MGA_721	LOCUS_07060	sequence35:1750..2172(-)	partial			WP_002898080.1	LemA family protein	95.0	70.4	38.3
MGA_722	LOCUS_07070	sequence35:2440..2868(-)	partial			WP_146623251.1	beta-glucoside-specific PTS transporter subunit IIABC	85.2	19.1	43.8
MGA_724	LOCUS_07090	sequence35:4717..5085(-)	partial			WP_020862982.1	PTS transporter subunit EIIC	77.0	12.8	40.0
MGA_737	LOCUS_07220	sequence36:4861..5154(-)	internal_stop_codon	5416..5418(-)		WP_011166520.1	ABC transporter permease	99.0	17.0	32.4
MGA_738	LOCUS_07230	sequence36:5416..5643(-)	internal_stop_codon	5779..5781(-),5416..5418(-)		WP_011166520.1	ABC transporter permease	100.0	12.3	40.8
MGA_739	LOCUS_07240	sequence36:5779..6489(-)	internal_stop_codon	5779..5781(-)		WP_011166520.1	ABC transporter permease	91.5	35.4	35.9
MGA_743	LOCUS_07260	sequence37:1531..1731(-)	internal_stop_codon	1825..1827(-),1762..1764(-)		WP_011262514.1	sugar ABC transporter permease	100.0	22.4	42.6
MGA_752	LOCUS_07340	sequence38:353..982(-)	internal_stop_codon	1016..1018(-)		WP_011183374.1	proline--tRNA ligase	100.0	42.9	39.5
MGA_753	LOCUS_07350	sequence38:1016..1261(-)	internal_stop_codon	1016..1018(-),1319..1321(-),1364..1366(-),1382..1384(-)		WP_011183374.1	proline--tRNA ligase	100.0	17.1	63.0
MGA_754	LOCUS_07360	sequence38:2437..2682(+)	internal_stop_codon	2332..2334(+)		WP_012545050.1	SsrA-binding protein SmpB	91.4	49.7	60.8
MGA_756	LOCUS_07380	sequence38:5248..5808(+)	internal_stop_codon	5806..5808(+)		WP_036649108.1	DUF6037 family protein	89.8	78.9	46.6
MGA_762	LOCUS_07440	sequence39:3398..4066(+)	partial			WP_010951379.1	DNA cytosine methyltransferase	91.0	62.9	62.3
MGA_763	LOCUS_07450	sequence39:4067..4384(+)	internal_stop_codon	4064..4066(+)		WP_011964247.1	DNA cytosine methyltransferase	95.2	29.9	69.0
MGA_764	LOCUS_07460	sequence39:4484..4783(+)	internal_stop_codon	4781..4783(+)		WP_003699839.1	elongation factor P	100.0	53.5	49.5
MGA_765	LOCUS_07470	sequence39:4814..5047(+)	internal_stop_codon	4781..4783(+)		WP_010880878.1	elongation factor P	85.7	34.4	40.9
MGA_772	LOCUS_07540	sequence40:3326..3748(+)	internal_stop_codon	3746..3748(+)		WP_011183530.1	peptide chain release factor 1	99.3	38.3	49.6
MGA_773	LOCUS_07550	sequence40:3764..4405(+)	internal_stop_codon	3746..3748(+)		WP_011183530.1	peptide chain release factor 1	97.7	57.6	60.5
MGA_775	LOCUS_07570	sequence40:4606..5046(+)	internal_stop_codon	4603..4605(+)		WP_010922303.1	peptide chain release factor N(5)-glutamine methyltransferase	85.6	44.8	44.1
MGA_783	LOCUS_07630	sequence42:934..1101(+)	internal_stop_codon	1099..1101(+)		WP_010932838.1	30S ribosomal protein S16	98.2	41.8	64.3
MGA_784	LOCUS_07640	sequence42:1182..1790(+)	frameshift,internal_stop_codon	1806..1808(+),1788..1790(+)	1865	WP_011016280.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	100.0	83.6	56.7
MGA_786	LOCUS_07660	sequence42:2662..4035(-)	internal_stop_codon	2662..2664(-),4216..4218(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	99.6	68.4	41.7
MGA_787	LOCUS_07670	sequence42:5034..5225(+)	partial			WP_011476106.1	Cof-type HAD-IIB family hydrolase	95.2	22.3	48.3
MGA_790	LOCUS_07680	sequence43:835..1011(-)	internal_stop_codon	835..837(-),1144..1146(-)		WP_002456533.1	DNA topoisomerase IV subunit B	94.8	8.1	60.0
MGA_791	LOCUS_07690	sequence43:1789..1908(-)	internal_stop_codon	1789..1791(-)		WP_011166217.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	6.2	69.2
MGA_794	LOCUS_07720	sequence43:3443..3844(-)	internal_stop_codon	3920..3922(-)		WP_011183134.1	signal recognition particle-docking protein FtsY	94.0	34.1	62.4
MGA_795	LOCUS_07730	sequence43:3920..4486(-)	internal_stop_codon	3920..3922(-)		WP_000007656.1	signal recognition particle-docking protein FtsY	87.2	50.5	38.6
MGA_798	LOCUS_07760	sequence44:317..1840(-)	partial			WP_011254514.1	DUF1542 domain-containing protein	96.1	21.3	24.4
MGA_799	LOCUS_07770	sequence44:1973..4771(-)	internal_stop_codon	1973..1975(-)		WP_080388512.1	hyperosmolarity resistance protein Ebh	94.5	8.0	21.0
MGA_811	LOCUS_07890	sequence44:12410..13084(-)	internal_stop_codon	12389..12391(-),12410..12412(-),12296..12298(-)		WP_209611440.1	DNA cytosine methyltransferase	98.2	69.0	56.1
MGA_813	LOCUS_07910	sequence44:13682..14284(+)	internal_stop_codon	14282..14284(+)		WP_011183419.1	NAD(+) synthase	90.0	75.0	49.5
MGA_818	LOCUS_07960	sequence44:16600..17208(-)	internal_stop_codon	16600..16602(-),17380..17382(-),17263..17265(-),17467..17469(-)		WP_010874674.1	APC family permease	85.1	37.3	32.6
MGA_819	LOCUS_07970	sequence44:19452..19979(+)	partial			WP_010905541.1	DHH family phosphoesterase	94.9	25.2	36.1
MGA_822	LOCUS_08000	sequence44:21113..21928(+)	partial			WP_003132465.1	replicative DNA helicase	84.9	49.2	43.1
MGA_823	LOCUS_08010	sequence44:22092..22457(+)	partial			WP_010970119.1	HlyC/CorC family transporter	86.0	23.5	38.5
MGA_825	LOCUS_08030	sequence44:23384..23770(+)	internal_stop_codon	23828..23830(+),23960..23962(+),23768..23770(+)		WP_010905087.1	ATP-binding cassette domain-containing protein	100.0	23.5	60.9
MGA_826	LOCUS_08040	sequence44:23840..23962(+)	internal_stop_codon	23828..23830(+),23960..23962(+),23768..23770(+)		WP_041272056.1	ATP-binding cassette domain-containing protein	100.0	7.5	80.0
MGA_827	LOCUS_08050	sequence44:24050..24310(+)	internal_stop_codon	23828..23830(+),23960..23962(+),23768..23770(+),24518..24520(+),24308..24310(+)		WP_041168847.1	ATP-binding cassette domain-containing protein	98.8	15.5	65.9
MGA_828	LOCUS_08060	sequence44:24314..24520(+)	internal_stop_codon	24608..24610(+),24518..24520(+),24596..24598(+),24308..24310(+)		WP_000958776.1	ATP-binding cassette domain-containing protein	82.4	10.2	46.4
MGA_829	LOCUS_08070	sequence44:24659..25000(+)	internal_stop_codon	24608..24610(+),24518..24520(+),24596..24598(+)		WP_000942303.1	ATP-binding cassette domain-containing protein	80.5	17.1	53.8
MGA_831	LOCUS_08090	sequence44:25291..25680(+)	internal_stop_codon	25243..25245(+)		WP_010933661.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	85.3	44.4	38.7
MGA_833	LOCUS_08110	sequence44:25994..26449(+)	internal_stop_codon	25925..25927(+)		WP_010874742.1	deoxynucleoside kinase	89.4	59.0	29.9
MGA_834	LOCUS_08120	sequence44:26532..26999(+)	internal_stop_codon	26529..26531(+)		WP_005479701.1	hypoxanthine phosphoribosyltransferase	94.2	83.0	54.1
MGA_839	LOCUS_08170	sequence44:28589..28954(+)	internal_stop_codon	28952..28954(+)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	31.3	47.5
MGA_840	LOCUS_08180	sequence44:29384..29749(+)	internal_stop_codon	29321..29323(+)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	97.5	30.7	51.3
MGA_842	LOCUS_08200	sequence44:30151..31053(+)	partial			WP_011166731.1	DNA polymerase IV	84.0	58.0	36.1
MGA_844	LOCUS_08220	sequence44:31413..31751(+)	internal_stop_codon	31749..31751(+)		WP_010879950.1	nicotinate (nicotinamide) nucleotide adenylyltransferase	96.4	64.9	44.5
MGA_855	LOCUS_08330	sequence45:2153..2392(+)	partial			WP_012774938.1	Cof-type HAD-IIB family hydrolase	70.9	20.4	48.2
MGA_856	LOCUS_08340	sequence45:3345..3560(+)	internal_stop_codon	3333..3335(+),3558..3560(+)		WP_001832557.1	30S ribosomal protein S2	100.0	26.3	47.9
MGA_857	LOCUS_08350	sequence45:3594..4025(+)	internal_stop_codon	3333..3335(+),3558..3560(+)		WP_000111480.1	30S ribosomal protein S2	97.2	48.3	35.9
MGA_859	LOCUS_08370	sequence45:4283..4753(+)	internal_stop_codon	4181..4183(+),4751..4753(+)		WP_011183458.1	translation elongation factor Ts	100.0	54.2	42.2
MGA_860	LOCUS_08380	sequence45:4802..4942(+)	internal_stop_codon	4751..4753(+)		WP_000808106.1	translation elongation factor Ts	100.0	16.3	56.5
MGA_863	LOCUS_08400	sequence46:1238..2050(-)	internal_stop_codon	1238..1240(-)		WP_011166796.1	hypothetical protein	70.0	24.8	29.4
MGA_870	LOCUS_08470	sequence47:1419..2684(-)	internal_stop_codon	1419..1421(-)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	99.8	83.1	48.9
MGA_876	LOCUS_08520	sequence48:1248..2267(+)	partial			WP_003434402.1	ATP-dependent RecD-like DNA helicase	95.3	44.7	25.7
MGA_877	LOCUS_08530	sequence48:2331..2993(+)	internal_stop_codon	2265..2267(+)		WP_011674456.1	ATP-dependent RecD-like DNA helicase	75.9	19.6	34.1
MGA_879	LOCUS_08550	sequence48:3544..3774(+)	internal_stop_codon	3772..3774(+)		WP_011183569.1	tRNA lysidine(34) synthetase TilS	92.1	18.6	52.7
MGA_888	LOCUS_08630	sequence49:3218..3709(-)	internal_stop_codon	3764..3766(-)		WP_011174053.1	glucokinase	90.8	48.7	27.5
MGA_892	LOCUS_08650	sequence50:136..393(-)	internal_stop_codon	526..528(-),394..396(-)		WP_002295265.1	serine--tRNA ligase	96.5	19.4	58.5
MGA_893	LOCUS_08660	sequence50:526..1413(-)	internal_stop_codon	526..528(-),394..396(-)		WP_010880145.1	serine--tRNA ligase	99.3	68.9	45.1
MGA_898	LOCUS_08710	sequence51:650..1027(-)	internal_stop_codon	650..652(-),1091..1093(-),1298..1300(-)		WP_013447641.1	translation elongation factor 4	100.0	20.8	59.2
MGA_899	LOCUS_08720	sequence51:1298..2071(-)	internal_stop_codon	1091..1093(-),1298..1300(-)		WP_013447641.1	translation elongation factor 4	100.0	43.2	67.6
MGA_915	LOCUS_08860	sequence53:801..1142(+)	internal_stop_codon	795..797(+)		WP_170127867.1	IS1634 family transposase	77.0	16.1	33.3
MGA_918	LOCUS_08890	sequence53:2367..2495(-)	internal_stop_codon	2148..2150(-),2700..2702(-),2175..2177(-),2547..2549(-),2367..2369(-)		WP_010906007.1	phosphoketolase family protein	88.1	4.5	62.2
MGA_919	LOCUS_08900	sequence53:2547..2696(-)	internal_stop_codon	2847..2849(-),2700..2702(-),2814..2816(-),2547..2549(-),2367..2369(-)		WP_011101870.1	phosphoketolase family protein	95.9	6.0	61.7
MGA_922	LOCUS_08930	sequence53:3141..3458(-)	internal_stop_codon	3141..3143(-),3639..3641(-),3528..3530(-),2997..2999(-),3636..3638(-)		WP_002294145.1	phosphoketolase family protein	98.1	13.1	82.5
MGA_924	LOCUS_08940	sequence54:280..795(-)	partial			WP_003536196.1	DNA-directed RNA polymerase subunit beta'	59.6	7.3	49.0
MGA_925	LOCUS_08950	sequence54:1153..1920(-)	internal_stop_codon	1993..1995(-),1153..1155(-)		WP_000567939.1	DNA-directed RNA polymerase subunit beta'	98.4	19.5	54.8
MGA_927	LOCUS_08970	sequence54:2260..3171(-)	internal_stop_codon	3319..3321(-),1993..1995(-),3229..3231(-)		WP_004399688.1	DNA-directed RNA polymerase subunit beta'	76.9	17.8	46.4
MGA_928	LOCUS_08980	sequence54:3319..3597(-)	internal_stop_codon	3616..3618(-),3319..3321(-),3229..3231(-)		WP_010931850.1	DNA-directed RNA polymerase subunit beta'	98.9	6.1	65.9
MGA_929	LOCUS_08990	sequence54:3616..4125(-)	internal_stop_codon	3616..3618(-)		WP_011056488.1	DNA-directed RNA polymerase subunit gamma	64.5	15.6	45.9
MGA_930	LOCUS_09000	sequence54:4955..5689(-)	internal_stop_codon	4955..4957(-),5900..5902(-)		WP_002936570.1	DNA-directed RNA polymerase subunit beta	98.8	20.3	63.1
MGA_931	LOCUS_09010	sequence54:5900..7669(-)	internal_stop_codon	5900..5902(-),7760..7762(-)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	99.7	43.2	42.2
MGA_932	LOCUS_09020	sequence54:7760..8308(-)	internal_stop_codon	7760..7762(-)		WP_002936570.1	DNA-directed RNA polymerase subunit beta	83.0	11.9	36.4
MGA_941	LOCUS_09110	sequence54:17760..18065(-)	internal_stop_codon	18111..18113(-),18171..18173(-),18078..18080(-)		WP_011183470.1	phosphonate ABC transporter ATP-binding protein	93.1	37.3	45.3
MGA_942	LOCUS_09120	sequence54:18171..18491(-)	internal_stop_codon	18111..18113(-),18171..18173(-),18078..18080(-)		WP_002288042.1	amino acid ABC transporter ATP-binding protein	93.4	38.0	36.0
MGA_947	LOCUS_09170	sequence54:22353..23165(-)	partial			WP_011167107.1	ECF transporter S component	34.4	29.9	37.2
MGA_950	LOCUS_09200	sequence54:24536..25414(+)	internal_stop_codon	24329..24331(+),25412..25414(+),24473..24475(+),25628..25630(+)		WP_012870273.1	type I restriction endonuclease subunit R	97.9	28.6	41.4
MGA_951	LOCUS_09210	sequence54:25457..25630(+)	internal_stop_codon	25412..25414(+),25856..25858(+),25628..25630(+)		WP_000228826.1	type I restriction endonuclease subunit R	96.5	5.3	54.5
MGA_953	LOCUS_09230	sequence54:27090..27848(+)	internal_stop_codon	26976..26978(+),27846..27848(+)		WP_170127867.1	IS1634 family transposase	94.0	44.3	39.5
MGA_966	LOCUS_09340	sequence56:2281..2760(-)	internal_stop_codon	2764..2766(-),2281..2283(-)		WP_005902187.1	triose-phosphate isomerase	99.4	61.4	45.1
MGA_974	LOCUS_09400	sequence58:2544..>3332(-)	internal_stop_codon	2544..2546(-)		WP_011997492.1	chromosomal replication initiator protein DnaA	98.1	50.9	28.1
MGA_976	LOCUS_09410	sequence59:206..415(+)	partial			WP_011068530.1	LacI family DNA-binding transcriptional regulator	92.8	19.0	42.4
MGA_980	LOCUS_09450	sequence59:2287..2781(+)	internal_stop_codon	2884..2886(+),2827..2829(+),2779..2781(+)		WP_010874684.1	deoxyribonuclease IV	97.6	57.0	43.9
MGA_983	LOCUS_09470	sequence60:342..566(+)	internal_stop_codon	336..338(+),156..158(+)		WP_011183273.1	tRNA (cytidine(34)-2'-O)-methyltransferase	91.9	38.0	54.4
MGA_987	LOCUS_09510	sequence60:1872..2093(+)	internal_stop_codon	2091..2093(+),1863..1865(+),2238..2240(+)		WP_010875013.1	ribosome biogenesis GTPase YlqF	87.7	23.6	50.0
MGA_989	LOCUS_09530	sequence60:2501..2887(+)	partial			WP_011964127.1	YigZ family protein	85.2	52.9	47.7
MGA_995	LOCUS_09580	sequence62:293..490(-)	internal_stop_codon	605..607(-),293..295(-)		WP_021721608.1	ABC transporter ATP-binding protein	100.0	10.4	50.8
MGA_996	LOCUS_09590	sequence62:834..1175(-)	internal_stop_codon	1269..1271(-)		WP_010966684.1	ABC transporter ATP-binding protein	95.6	18.7	64.8
MGA_997	LOCUS_09600	sequence62:1269..2054(-)	internal_stop_codon	2094..2096(-),1269..1271(-)		WP_005814402.1	ABC transporter ATP-binding protein	96.9	44.0	45.3
MGA_998	LOCUS_09610	sequence62:2094..2375(-)	internal_stop_codon	2406..2408(-),2094..2096(-)		WP_013389612.1	ABC transporter ATP-binding protein	100.0	14.8	51.6
MGA_1000	LOCUS_09630	sequence63:1..587(+)	internal_stop_codon	717..719(+),585..587(+),681..683(+)		WP_042733551.1	IS3 family transposase	97.9	44.6	49.2
MGA_1019	LOCUS_09820	sequence63:10107..10364(-)	internal_stop_codon	9909..9911(-),10107..10109(-)		WP_011183114.1	magnesium transporter	81.2	14.7	40.6
MGA_1020	LOCUS_09830	sequence63:10369..10800(-)	partial			WP_010922244.1	diadenylate cyclase CdaA	100.0	51.2	46.2
MGA_1022	LOCUS_09850	sequence63:11412..11588(-)	internal_stop_codon	11412..11414(-),11679..11681(-)		WP_003564111.1	methionine adenosyltransferase	93.1	13.7	68.5
MGA_1023	LOCUS_09860	sequence63:11679..12029(-)	internal_stop_codon	11412..11414(-),12042..12044(-),11679..11681(-)		WP_011183137.1	methionine adenosyltransferase	100.0	30.8	69.8
MGA_1024	LOCUS_09870	sequence63:12042..12491(-)	internal_stop_codon	12042..12044(-)		WP_011183137.1	methionine adenosyltransferase	100.0	41.6	51.6
MGA_1032	LOCUS_09950	sequence63:19687..20205(-)	internal_stop_codon	20371..20373(-),20302..20304(-)		WP_010905637.1	phosphopentomutase	99.4	41.6	43.4
MGA_1033	LOCUS_09960	sequence63:20371..20604(-)	internal_stop_codon	20731..20733(-),20608..20610(-),20371..20373(-),20302..20304(-)		WP_001046067.1	phosphopentomutase	100.0	19.0	58.4
MGA_1036	LOCUS_09990	sequence63:21238..21462(+)	frameshift,internal_stop_codon	21249..21251(+),21225..21227(+),21487..21489(+),21460..21462(+)	21263	WP_011166240.1	FMN-dependent NADH-azoreductase	93.2	34.7	52.2
MGA_1042	LOCUS_10050	sequence65:268..531(-)	internal_stop_codon	268..270(-),616..618(-)		WP_010989921.1	oligoendopeptidase F	100.0	14.5	46.0
MGA_1043	LOCUS_10060	sequence65:751..1143(-)	internal_stop_codon	751..753(-),616..618(-)		WP_012258459.1	oligoendopeptidase F	80.8	17.4	28.6
MGA_1045	LOCUS_10080	sequence66:1..755(+)	internal_stop_codon	753..755(+),909..911(+),930..932(+),975..977(+)		WP_011166365.1	M17 family metallopeptidase	76.0	41.5	41.1
MGA_1048	LOCUS_10110	sequence66:1868..2182(+)	internal_stop_codon	2423..2425(+),1778..1780(+),2180..2182(+),2357..2359(+),2378..2380(+)		WP_011182968.1	M17 family metallopeptidase	100.0	23.0	60.6
MGA_1049	LOCUS_10120	sequence66:2189..2359(+)	internal_stop_codon	2357..2359(+),2423..2425(+),2378..2380(+),2180..2182(+)		WP_010874929.1	leucyl aminopeptidase	98.2	12.4	65.5
MGA_1050	LOCUS_10130	sequence66:2429..2668(+)	internal_stop_codon	2357..2359(+),2423..2425(+),2378..2380(+),2180..2182(+)		WP_011166365.1	M17 family metallopeptidase	92.4	16.2	47.3
MGA_1057	LOCUS_10190	sequence68:1744..2238(-)	internal_stop_codon	1744..1746(-)		WP_011166475.1	30S ribosomal protein S4	98.2	78.4	61.3
MGA_1064	LOCUS_10240	sequence70:779..1453(+)	partial			WP_048146836.1	Xaa-Pro dipeptidase PepQ	92.0	58.6	48.5
MGA_1065	LOCUS_10250	sequence70:1434..1739(+)	internal_stop_codon	1737..1739(+),1758..1760(+)		WP_011141435.1	prolyl aminopeptidase	99.0	31.7	57.0
MGA_1066	LOCUS_10260	sequence70:1770..2042(+)	internal_stop_codon	2040..2042(+),2094..2096(+),1737..1739(+),1758..1760(+)		WP_003414210.1	prolyl aminopeptidase	54.4	14.9	51.0
MGA_1069	LOCUS_10280	sequence71:1267..1476(-)	internal_stop_codon	1546..1548(-)		WP_003243021.1	thioredoxin-disulfide reductase	98.6	21.5	51.5
MGA_1070	LOCUS_10290	sequence71:1546..1809(-)	internal_stop_codon	1546..1548(-),2014..2016(-),2041..2043(-),1834..1836(-)		WP_010874597.1	thioredoxin-disulfide reductase	95.4	26.3	43.4
MGA_1076	LOCUS_10320	sequence73:228..533(-)	partial			WP_012259746.1	cysteine hydrolase	71.3	32.5	37.7
MGA_1079	LOCUS_10350	sequence73:1926..2309(-)	frameshift,internal_stop_codon	1925..1927(-),1883..1885(-),2432..2434(-)	2359	WP_010874675.1	APC family permease	100.0	28.6	31.9
MGA_1081	LOCUS_10370	sequence73:2967..4433(-)	internal_stop_codon	4536..4538(-)		WP_020862721.1	endopeptidase La	90.4	55.9	55.3
MGA_1082	LOCUS_10380	sequence73:4536..4991(-)	internal_stop_codon	4536..4538(-)		WP_010874688.1	endopeptidase La	67.5	12.5	34.3
MGA_1085	LOCUS_10410	sequence73:6249..6389(-)	internal_stop_codon	6030..6032(-),6603..6605(-),6249..6251(-),6528..6530(-)		WP_002852890.1	leucine--tRNA ligase	100.0	5.7	76.1
MGA_1090	LOCUS_10460	sequence73:10058..10630(-)	internal_stop_codon	10052..10054(-),10823..10825(-),10058..10060(-)		WP_002682412.1	translation initiation factor IF-2	98.4	21.0	42.0
MGA_1091	LOCUS_10470	sequence73:10823..11860(-)	internal_stop_codon	10823..10825(-)		WP_011183192.1	translation initiation factor IF-2	96.5	53.6	51.3
MGA_1101	LOCUS_10570	sequence73:17421..17657(-)	internal_stop_codon	17871..17873(-),17784..17786(-)		WP_011166335.1	glutamate--tRNA ligase	98.7	15.9	42.9
MGA_1102	LOCUS_10580	sequence73:17982..18116(-)	internal_stop_codon	17871..17873(-),18285..18287(-),18339..18341(-),17982..17984(-),18138..18140(-)		WP_002986105.1	glutamate--tRNA ligase	100.0	9.4	68.9
MGA_1104	LOCUS_10600	sequence73:18648..18839(-)	internal_stop_codon	18648..18650(-)		WP_010875035.1	glutamate--tRNA ligase	98.4	12.8	74.2
MGA_1105	LOCUS_10610	sequence73:19123..19332(+)	internal_stop_codon	19330..19332(+)		WP_012583295.1	amidohydrolase	94.2	15.3	35.4
MGA_1106	LOCUS_10620	sequence73:19414..20376(+)	internal_stop_codon	19330..19332(+)		WP_011250842.1	amidohydrolase family protein	98.8	74.5	37.8
MGA_1107	LOCUS_10630	sequence73:20529..21137(+)	internal_stop_codon	21135..21137(+),21354..21356(+),21201..21203(+),21264..21266(+)		WP_010875014.1	YitT family protein	71.3	34.9	32.4
MGA_1129	LOCUS_10790	sequence79:139..894(-)	internal_stop_codon	913..915(-),910..912(-)		WP_043943600.1	ABC transporter ATP-binding protein	96.4	38.7	55.0
MGA_1130	LOCUS_10800	sequence79:913..1371(-)	internal_stop_codon	913..915(-),910..912(-)		WP_011459544.1	ABC transporter ATP-binding protein	96.1	22.8	37.2
MGA_1132	LOCUS_10810	sequence80:146..577(-)	internal_stop_codon	614..616(-)		WP_004080738.1	SPFH domain-containing protein	96.5	46.9	49.0
MGA_1133	LOCUS_10820	sequence80:614..1084(-)	internal_stop_codon	614..616(-)		WP_011015666.1	SPFH domain-containing protein	86.5	45.9	52.6
MGA_1135	LOCUS_10830	sequence81:131..715(-)	internal_stop_codon	95..97(-),131..133(-)		WP_170127867.1	IS1634 family transposase	90.7	33.0	47.7
MGA_1136	LOCUS_10840	sequence82:62..205(-)	internal_stop_codon	62..64(-),287..289(-),26..28(-)		WP_042733551.1	IS3 family transposase	97.9	11.3	58.3
MGA_1137	LOCUS_10850	sequence82:287..913(-)	internal_stop_codon	920..922(-),62..64(-),287..289(-),26..28(-)		WP_042733551.1	IS3 family transposase	90.4	44.8	42.7
MGA_1145	LOCUS_10910	sequence83:4208..4597(-)	internal_stop_codon	4043..4045(-),3956..3958(-),4028..4030(-),4100..4102(-),4208..4210(-)		WP_012584022.1	alpha-amylase family glycosyl hydrolase	83.7	21.6	45.4
MGA_1149	LOCUS_10950	sequence83:6263..7345(-)	internal_stop_codon	6263..6265(-)		WP_011183072.1	pyruvate kinase	98.1	73.4	62.3
MGA_1157	LOCUS_11030	sequence83:11699..11983(-)	internal_stop_codon	11990..11992(-),11699..11701(-)		WP_011107870.1	2-hydroxyacid dehydrogenase	92.6	26.1	48.3
MGA_1158	LOCUS_11040	sequence83:11990..12337(-)	internal_stop_codon	11990..11992(-),12350..12352(-)		WP_002210998.1	2-hydroxyacid dehydrogenase	96.5	33.6	39.6
MGA_1169	LOCUS_11150	sequence83:16901..17404(-)	internal_stop_codon	17642..17644(-)		WP_002381313.1	isoleucine--tRNA ligase	98.8	19.8	31.4
MGA_1171	LOCUS_11170	sequence83:18926..19171(-)	internal_stop_codon	18788..18790(-),18773..18775(-),19202..19204(-),19391..19393(-),18926..18928(-)		WP_011124423.1	isoleucine--tRNA ligase	90.1	7.5	47.9
MGA_1174	LOCUS_11190	sequence84:615..890(+)	internal_stop_codon	564..566(+),450..452(+)		WP_010956682.1	IS30-like element ISTde2 family transposase	96.7	26.3	36.2
MGA_1183	LOCUS_11240	sequence89:244..771(+)	internal_stop_codon	202..204(+)		WP_011393940.1	elongation factor G	95.4	24.0	65.3
MGA_1188	LOCUS_11280	sequence91:876..1160(-)	internal_stop_codon	1263..1265(-)		WP_001250038.1	50S ribosomal protein L13	98.9	64.1	54.8
MGA_1192	LOCUS_11320	sequence91:4063..4524(-)	partial			WP_012048082.1	protein translocase subunit SecF	98.7	50.2	44.7
MGA_1193	LOCUS_11330	sequence91:4984..5478(-)	internal_stop_codon	5479..5481(-)		WP_003245970.1	protein translocase subunit SecDF	95.1	21.2	38.5
MGA_1199	LOCUS_11390	sequence91:8758..9558(+)	internal_stop_codon	8716..8718(+)		WP_011861133.1	nucleotidyltransferase	100.0	69.2	29.7
MGA_1200	LOCUS_11400	sequence91:9572..9871(-)	internal_stop_codon	9920..9922(-)		WP_011016603.1	pseudouridine synthase	81.8	35.4	48.1
MGA_1202	LOCUS_11420	sequence91:10281..10688(-)	internal_stop_codon	10692..10694(-),10743..10745(-),10740..10742(-)		WP_011183151.1	glucose-6-phosphate isomerase	98.5	31.5	55.2
MGA_1203	LOCUS_11430	sequence91:10743..11261(-)	internal_stop_codon	11448..11450(-),10743..10745(-),11439..11441(-),11373..11375(-),10692..10694(-),10740..10742(-)		WP_001831993.1	glucose-6-phosphate isomerase	99.4	38.6	52.9
MGA_1205	LOCUS_11450	sequence91:11704..12870(-)	internal_stop_codon	12871..12873(-),12892..12894(-)		WP_011183314.1	molecular chaperone DnaK	97.4	63.9	55.6
MGA_1206	LOCUS_11460	sequence91:12892..13503(-)	internal_stop_codon	12871..12873(-),12892..12894(-)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	72.4
MGA_1207	LOCUS_11470	sequence91:13615..14439(-)	partial			WP_010874477.1	nucleotide exchange factor GrpE	59.9	74.2	31.1
MGA_1211	LOCUS_11510	sequence91:16507..16878(+)	internal_stop_codon	16876..16878(+),16345..16347(+)		WP_012775079.1	ABC transporter ATP-binding protein	95.9	20.8	38.3
MGA_1212	LOCUS_11520	sequence91:16888..17352(+)	internal_stop_codon	16876..16878(+)		WP_013389612.1	ABC transporter ATP-binding protein	99.4	24.6	54.5
MGA_1214	LOCUS_11540	sequence91:17571..17939(+)	partial			WP_009967136.1	ABC transporter ATP-binding protein	86.1	17.9	25.7
MGA_1215	LOCUS_11550	sequence91:18921..19163(+)	partial			WP_002287265.1	ABC transporter ATP-binding protein	100.0	12.5	57.5
MGA_1217	LOCUS_11570	sequence91:20393..20551(-)	internal_stop_codon	20111..20113(-),20393..20395(-),20159..20161(-)		WP_010874884.1	inorganic diphosphatase	98.1	27.7	60.8