{ "type": "genome", "identifier": "GCF_003584015.1", "organism": "Aurantiacibacter xanthus", "title": "Aurantiacibacter xanthus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Second Institute of Oceanography, State Oceanic Administration", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003584015.1", "bioproject": "PRJNA224116", "biosample": "SAMN09930779", "wgs_master": "QXFM00000000.1", "refseq_category": "reference genome", "taxid": "1784712", "species_taxid": "1784712", "organism_name": "Aurantiacibacter xanthus", "infraspecific_name": "strain=CCTCC AB 2015396", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/20", "asm_name": "ASM358401v1", "asm_submitter": "Second Institute of Oceanography, State Oceanic Administration", "gbrs_paired_asm": "GCA_003584015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/584/015/GCF_003584015.1_ASM358401v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4380877", "genome_size_ungapped": "4380627", "gc_percent": "64.500000", "replicon_count": "0", "scaffold_count": "146", "contig_count": "146", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003584015.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "4216", "protein_coding_gene_count": "4056", "non_coding_gene_count": "70", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-20", "dateModified": "2018-09-20", "datePublished": "2018-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Aurantiacibacter xanthus" ], "sample_taxid": [ "1784712" ], "sample_host_organism": [], 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"total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantiacibacter zhengii", "strain": "strain=V18", "accession": "GCA_003584125.1", "taxid": 2307003, "species_taxid": 2307003, "relation_to_type": "type", "validated": true, "ani": 79.5618, "matched_fragments": 473, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erythrobacter colymbi", "strain": "strain=JCM 18338", "accession": "GCA_002155685.1", "taxid": 1161202, "species_taxid": 1161202, "relation_to_type": "type", "validated": true, "ani": 79.5174, "matched_fragments": 462, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania aurantiaca", "strain": "strain=1NDH13", "accession": "GCA_019711375.1", "taxid": 2867233, "species_taxid": 2867233, "relation_to_type": "type", "validated": true, "ani": 79.2255, "matched_fragments": 388, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteraurantiacibacter aestuarii", "strain": "strain=JCM 16339", "accession": "GCA_009827405.1", "taxid": 650004, "species_taxid": 650004, "relation_to_type": "type", "validated": true, "ani": 79.1992, "matched_fragments": 343, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagerythrobacter rhizovicinus", "strain": "strain=AY-3R", "accession": "GCA_004135625.1", "taxid": 2268576, "species_taxid": 2268576, "relation_to_type": "type", "validated": true, "ani": 79.1604, "matched_fragments": 398, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantiacibacter gangjinensis", "strain": "strain=CGMCC 1.15024", "accession": "GCA_001886695.1", "taxid": 502682, "species_taxid": 502682, "relation_to_type": "type", "validated": true, "ani": 79.0113, "matched_fragments": 356, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { 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"strain": "strain=DSM 10594", "accession": "GCA_002155695.1", "taxid": 60454, "species_taxid": 60454, "relation_to_type": "type", "validated": true, "ani": 78.9059, "matched_fragments": 399, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania gelatinilytica", "strain": "strain=1NDH1", "accession": "GCA_019711315.1", "taxid": 2867231, "species_taxid": 2867231, "relation_to_type": "type", "validated": true, "ani": 78.8276, "matched_fragments": 349, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium arvoryzae", "strain": "strain=KCTC 32422", "accession": "GCA_014652615.1", "taxid": 1256514, "species_taxid": 1256514, "relation_to_type": "type", "validated": true, "ani": 78.7487, "matched_fragments": 371, "total_fragments": 1386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium huizhouense", "strain": "strain=c7", "accession": 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