# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:1103..1549(+)	partial			WP_000577652.1	helix-turn-helix transcriptional regulator	70.9	70.5	47.6
MGA_28	LOCUS_00280	sequence01:30186..30629(-)	partial			WP_000373291.1	4Fe-4S mono-cluster protein YjdI	41.5	80.3	55.7
MGA_42	LOCUS_00420	sequence01:45126..45485(+)	frameshift,internal_stop_codon	45723..45725(+)	45392,45395	WP_000448918.1	alpha/beta hydrolase	75.6	32.6	68.9
MGA_43	LOCUS_00430	sequence01:45394..45723(+)	frameshift,internal_stop_codon	45723..45725(+)	45392,45395	WP_000448918.1	alpha/beta hydrolase	100.0	39.1	66.1
MGA_51	LOCUS_00510	sequence01:52486..52905(-)	frameshift,internal_stop_codon	52485..52487(-)	52976	WP_000468966.1	methyltransferase domain-containing protein	96.4	55.8	36.3
MGA_69	LOCUS_00670	sequence01:70169..70945(-)	partial			WP_010990014.1	autolysin Ami	91.1	27.7	38.3
MGA_92	LOCUS_00900	sequence01:89855..90688(-)	partial			WP_011837080.1	type II CAAX endopeptidase family protein	83.8	74.2	25.0
MGA_95	LOCUS_00930	sequence01:95500..95865(-)	internal_stop_codon	95890..95892(-)		WP_012803910.1	M48 family metallopeptidase	73.6	20.2	37.8
MGA_100	LOCUS_00980	sequence01:100733..101416(-)	partial			WP_001168472.1	DUF418 domain-containing protein	80.2	57.4	31.9
MGA_130	LOCUS_01280	sequence01:137862..138551(-)	partial			WP_011082784.1	DsbA family protein	71.6	80.3	38.4
MGA_133	LOCUS_01310	sequence01:142032..142169(+)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_194	LOCUS_01920	sequence01:201905..202504(-)	partial			WP_001829387.1	hypothetical protein	74.4	49.3	75.0
MGA_207	LOCUS_02040	sequence02:1..732(+)	partial			WP_162685290.1	restriction endonuclease subunit S	100.0	62.3	45.9
MGA_262	LOCUS_02590	sequence02:56434..56610(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_263	LOCUS_02600	sequence02:57203..57655(+)	partial			WP_001802667.1	NfeD family protein	100.0	66.1	62.0
MGA_359	LOCUS_03560	sequence04:493..792(-)	partial			WP_000736784.1	glycine-glycine endopeptidase LytM	91.9	28.8	75.8
MGA_403	LOCUS_04000	sequence04:59928..60557(-)	frameshift		60565	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	98.6	44.6	64.6
MGA_424	LOCUS_04200	sequence05:9859..10026(+)	partial			WP_001832593.1	CsbA family protein	90.9	64.9	70.0
MGA_478	LOCUS_04740	sequence05:64550..64777(-)	frameshift,internal_stop_codon	64488..64490(-)	64512,64400,64893,64307,64572,64557	WP_000782463.1	bi-component leukocidin LukED subunit D	86.7	19.9	69.2
MGA_542	LOCUS_05380	sequence06:57501..58082(+)	partial			WP_000610259.1	MSCRAMM family adhesin SdrE	91.2	16.2	31.7
MGA_547	LOCUS_05430	sequence07:222..953(+)	partial			WP_094374263.1	IS3 family transposase	90.5	49.5	49.3
MGA_557	LOCUS_05530	sequence07:9851..10696(+)	frameshift		10639	WP_000675401.1	MFS transporter	97.5	68.3	67.9
MGA_558	LOCUS_05540	sequence07:10690..11040(+)	frameshift		10645	WP_000675401.1	MFS transporter	95.7	28.0	64.9
MGA_560	LOCUS_05560	sequence07:11823..12416(-)	partial			WP_005173372.1	MFS transporter	46.7	23.8	56.5
MGA_573	LOCUS_05690	sequence07:27084..27287(+)	internal_stop_codon	27285..27287(+)		WP_011100869.1	NAD(P)H-dependent oxidoreductase	98.5	32.6	48.6
MGA_574	LOCUS_05700	sequence07:27288..27527(+)	internal_stop_codon	27285..27287(+)		WP_001094117.1	NAD(P)H-dependent oxidoreductase	100.0	36.6	48.1
MGA_589	LOCUS_05850	sequence07:44906..45421(+)	partial			WP_001044560.1	immunodominant staphylococcal antigen IsaB	81.9	68.6	31.5
MGA_664	LOCUS_06600	sequence09:581..1123(+)	partial			WP_002468298.1	DNA-directed RNA polymerase subunit delta	73.3	74.2	76.5
MGA_824	LOCUS_08200	sequence11:34233..34781(-)	partial			WP_080769325.1	reverse transcriptase domain-containing protein	65.4	50.9	49.6
MGA_860	LOCUS_08550	sequence12:19629..20618(+)	partial			WP_000814809.1	dicarboxylate/amino acid:cation symporter	93.3	71.3	45.8
MGA_863	LOCUS_08580	sequence12:21617..23077(-)	partial			WP_001041666.1	LysM peptidoglycan-binding domain-containing protein	29.6	39.2	51.4
MGA_865	LOCUS_08600	sequence12:23556..25601(-)	partial			WP_000276646.1	BppU family phage baseplate upper protein	26.4	38.8	35.3
MGA_871	LOCUS_08660	sequence12:29900..37312(-)	partial			WP_004398800.1	phage tail protein	12.3	34.2	30.3
MGA_892	LOCUS_08870	sequence12:63753..64961(-)	partial			WP_010964450.1	hypothetical protein	78.9	60.1	27.3
MGA_921	LOCUS_09160	sequence12:86596..87696(+)	partial			WP_001165409.1	LAGLIDADG family homing endonuclease	79.8	74.6	26.8
MGA_923	LOCUS_09180	sequence12:88755..89249(+)	partial			WP_009967478.1	hypothetical protein	75.0	71.2	39.8
MGA_963	LOCUS_09580	sequence12:110638..111990(+)	partial			WP_012289074.1	RNA-guided endonuclease TnpB family protein	47.6	48.3	30.7
MGA_978	LOCUS_09730	sequence12:117327..118817(+)	partial			WP_009967475.1	DNA polymerase III subunit alpha	95.4	35.6	44.8
MGA_979	LOCUS_09740	sequence12:119116..121611(+)	partial			WP_009967475.1	DNA polymerase III subunit alpha	99.6	64.2	40.6
MGA_983	LOCUS_09780	sequence12:123864..124235(+)	partial			WP_143485739.1	thermonuclease family protein	65.9	45.2	43.5
MGA_992	LOCUS_09870	sequence12:127078..127242(-)	partial			WP_012047782.1	DNA (cytosine-5-)-methyltransferase	96.3	15.3	57.7
MGA_993	LOCUS_09880	sequence12:127349..127732(+)	partial			WP_010964535.1	DNA cytosine methyltransferase	96.9	40.4	50.4
MGA_994	LOCUS_09890	sequence12:127760..128158(+)	partial			WP_004399270.1	DNA (cytosine-5-)-methyltransferase	48.5	12.2	53.1
MGA_1014	LOCUS_10090	sequence12:141151..141468(+)	partial			WP_000814826.1	dicarboxylate/amino acid:cation symporter	91.4	23.4	56.2
MGA_1023	LOCUS_10180	sequence12:151891..152820(-)	partial			WP_002355251.1	MFS transporter	97.1	73.9	44.5
MGA_1024	LOCUS_10190	sequence12:153430..153708(-)	partial			WP_002355251.1	MFS transporter	82.6	18.2	53.9
MGA_1039	LOCUS_10340	sequence12:165817..166185(+)	partial			WP_003577315.1	phospholipase A2 family protein	38.5	23.6	53.2
MGA_1051	LOCUS_10460	sequence12:174743..175606(+)	frameshift		174722	WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	98.3	56.3	52.8
MGA_1116	LOCUS_11080	sequence14:555..929(+)	frameshift,internal_stop_codon	939..941(+),1131..1133(+),927..929(+)	1136,962	WP_011391832.1	IS21-like element helper ATPase IstB	62.9	31.0	51.3
MGA_1117	LOCUS_11090	sequence14:1732..2499(+)	partial			WP_011837079.1	type II CAAX endopeptidase family protein	89.4	74.0	23.6
MGA_1124	LOCUS_11160	sequence14:8579..9457(-)	partial			WP_002494345.1	MFS transporter	99.0	72.8	64.0
MGA_1139	LOCUS_11310	sequence14:26061..29021(-)	partial			WP_000934467.1	MSCRAMM family adhesin SdrD	81.2	57.1	41.8
MGA_1140	LOCUS_11320	sequence14:28996..29454(-)	partial			WP_001060462.1	MSCRAMM family adhesin SdrC	90.1	14.6	33.3
MGA_1146	LOCUS_11380	sequence14:32236..32802(+)	partial			WP_001148136.1	SH3 domain-containing protein	99.5	38.0	39.5
MGA_1148	LOCUS_11400	sequence14:33595..35187(+)	partial			WP_000627748.1	N-6 DNA methylase	52.1	59.4	31.6
MGA_1183	LOCUS_11740	sequence15:13172..13762(-)	partial			WP_001803121.1	fatty acid efflux MMPL transporter FarE	92.9	22.1	49.5
MGA_1293	LOCUS_12830	sequence17:43883..44224(-)	partial			WP_011391832.1	IS21-like element helper ATPase IstB	67.3	30.2	56.6
MGA_1375	LOCUS_13650	sequence20:8339..9040(+)	partial			WP_011393523.1	S8 family peptidase	63.9	41.6	29.0
MGA_1378	LOCUS_13680	sequence20:11020..11844(-)	partial			WP_012582729.1	radical SAM protein	60.2	57.7	35.2
MGA_1437	LOCUS_14270	sequence21:33938..34105(-)	partial			WP_011082768.1	winged helix DNA-binding protein	89.1	34.3	44.9
MGA_1439	LOCUS_14290	sequence21:36169..36414(-)	partial			WP_011100959.1	sce7725 family protein	97.5	26.2	43.8
MGA_1477	LOCUS_14650	sequence23:3441..3827(+)	internal_stop_codon	3357..3359(+)		WP_010989581.1	GNAT family N-acetyltransferase	97.7	73.8	43.2
MGA_1486	LOCUS_14740	sequence23:14448..15350(-)	internal_stop_codon	15459..15461(-)		WP_000202034.1	AbgT family transporter	95.7	56.1	60.3
MGA_1487	LOCUS_14750	sequence23:15459..15980(-)	internal_stop_codon	15459..15461(-)		WP_000202034.1	AbgT family transporter	96.5	32.6	59.9
MGA_1523	LOCUS_15110	sequence23:48220..49104(+)	partial			WP_001831571.1	CPBP family intramembrane metalloprotease	90.8	70.4	55.8
MGA_1599	LOCUS_15870	sequence23:121388..123259(-)	partial			WP_012775697.1	DUF6359 domain-containing protein	92.3	54.1	44.5
MGA_1661	LOCUS_16490	sequence24:13315..14799(-)	internal_stop_codon	14818..14820(-)		WP_000614258.1	L-fucose isomerase	100.0	84.0	71.5
MGA_1662	LOCUS_16500	sequence24:14818..15084(-)	internal_stop_codon	14818..14820(-)		WP_000614258.1	L-fucose isomerase	96.6	14.5	70.6
MGA_1673	LOCUS_16610	sequence24:24729..25607(-)	partial			WP_011403679.1	NAD(P)H-binding protein	47.3	28.3	35.0
MGA_1677	LOCUS_16650	sequence24:28032..28406(-)	partial			WP_194313290.1	IS1182 family transposase	91.9	19.6	45.6
MGA_1699	LOCUS_16870	sequence25:15285..16190(+)	partial			WP_001829926.1	lytic transglycosylase	84.7	67.6	28.8
MGA_1714	LOCUS_17020	sequence26:2053..2532(+)	partial			WP_005809976.1	MarR family transcriptional regulator	64.8	64.8	28.2
MGA_1715	LOCUS_17030	sequence26:3350..3691(+)	partial			WP_003228068.1	MFS transporter	93.8	26.6	27.1
MGA_1718	LOCUS_17060	sequence26:6158..6838(-)	frameshift		6195,6837	WP_000405352.1	zeta toxin family protein	96.5	84.8	63.8
MGA_1719	LOCUS_17070	sequence26:6901..7110(-)	partial			WP_012775115.1	helix-turn-helix transcriptional regulator	72.5	33.5	67.9
MGA_1727	LOCUS_17150	sequence26:16822..18027(+)	partial			WP_010878621.1	radical SAM protein	28.7	30.5	38.7
MGA_1728	LOCUS_17160	sequence26:18020..18937(+)	partial			WP_010963821.1	S41 family peptidase	66.9	54.3	27.5
MGA_1750	LOCUS_17370	sequence28:70..246(-)	internal_stop_codon	316..318(-)		WP_002287522.1	IS200/IS605-like element ISEfa4 family transposase	100.0	43.3	81.0
MGA_1752	LOCUS_17390	sequence28:1718..2134(-)	partial			WP_002456424.1	halocin C8 precursor-like protein	100.0	56.6	78.3
MGA_1757	LOCUS_17440	sequence28:9950..11488(-)	internal_stop_codon	11489..11491(-)		WP_000706111.1	PTS fructose transporter subunit IIABC	99.4	81.1	67.6
MGA_1758	LOCUS_17450	sequence28:11489..11893(-)	internal_stop_codon	11489..11491(-)		WP_002456327.1	fructose-specific PTS transporter subunit EIIC	78.4	16.3	77.1
MGA_1763	LOCUS_17500	sequence28:14917..15327(+)	partial			WP_000206343.1	DUF1829 domain-containing protein	96.3	50.0	84.7
MGA_1790	LOCUS_17760	sequence30:6135..6350(+)	internal_stop_codon	6438..6440(+),6348..6350(+)		WP_138936980.1	IS110 family transposase	76.1	13.8	57.4
MGA_1791	LOCUS_17770	sequence30:6477..6716(+)	frameshift,internal_stop_codon	6438..6440(+),6771..6773(+),6903..6905(+),6348..6350(+)	6689,6830	WP_154224912.1	IS110 family transposase	86.1	17.3	48.5
MGA_1806	LOCUS_17920	sequence30:18826..19158(+)	frameshift		19137	WP_000041880.1	type II toxin-antitoxin system PemK/MazF family toxin	88.2	43.2	40.6
MGA_1845	LOCUS_18300	sequence33:5757..5999(-)	partial			WP_011082672.1	tyrosine-type recombinase/integrase	75.0	74.1	80.0
MGA_1850	LOCUS_18350	sequence33:9206..10786(+)	partial			WP_011109061.1	AAA family ATPase	58.9	78.2	29.7
MGA_1866	LOCUS_18510	sequence34:11352..12044(-)	partial			WP_002485108.1	DMT family transporter	99.1	74.1	48.5
MGA_1897	LOCUS_18820	sequence34:39569..40126(-)	partial			WP_002363448.1	chorismate mutase	98.4	64.8	45.6
MGA_2019	LOCUS_20030	sequence36:1..569(+)	partial			WP_011021589.1	IS21-like element ISMac3 family transposase	97.3	43.7	28.0
MGA_2021	LOCUS_20050	sequence36:1404..2129(+)	partial			WP_010959211.1	GHKL domain-containing protein	92.9	52.2	61.2
MGA_2041	LOCUS_20250	sequence38:580..1215(-)	partial			WP_010990027.1	DUF4969 domain-containing protein	74.4	56.7	33.3
MGA_2042	LOCUS_20260	sequence38:2121..2714(+)	internal_stop_codon	2112..2114(+)		WP_001039454.1	serine protease SplB	97.5	82.1	44.7
MGA_2048	LOCUS_20320	sequence38:8126..8971(-)	frameshift		8137	WP_004399048.1	endonuclease YokF	91.1	84.1	35.2
MGA_2050	LOCUS_20330	sequence39:161..4951(+)	partial			WP_115330673.1	type I polyketide synthase	53.7	30.7	20.9
MGA_2055	LOCUS_20380	sequence39:7850..8281(+)	frameshift		8257	WP_094396572.1	IS3 family transposase	95.1	31.3	46.8
MGA_2062	LOCUS_20450	sequence40:5137..6096(+)	partial			WP_011861628.1	pitrilysin family protein	51.1	42.1	31.7
MGA_2064	LOCUS_20470	sequence40:6695..7372(-)	partial			WP_012545137.1	Crp/Fnr family transcriptional regulator	47.1	46.4	27.4
MGA_2076	LOCUS_20580	sequence42:4870..5613(+)	frameshift		4714	WP_002444002.1	copper resistance protein CopC	99.2	58.7	35.5
MGA_2077	LOCUS_20590	sequence42:5633..6214(+)	partial			WP_003974977.1	YcnI family protein	80.8	71.5	32.0
MGA_2089	LOCUS_20710	sequence43:5493..>6209(-)	partial			WP_001631029.1	restriction endonuclease subunit S	100.0	59.2	40.0
MGA_2093	LOCUS_20750	sequence44:5201..>6175(-)	partial			WP_000028663.1	type I restriction-modification system subunit M	99.7	62.4	85.1
MGA_2102	LOCUS_20840	sequence45:13673..16234(+)	partial			WP_000970545.1	glycosyltransferase family A protein	27.5	67.5	26.3
MGA_2105	LOCUS_20870	sequence45:18934..20124(+)	partial			WP_012582958.1	glycosyltransferase family 4 protein	72.0	72.0	22.7
MGA_2106	LOCUS_20880	sequence45:20130..21050(+)	partial			WP_003227930.1	teichoic acids export ABC transporter ATP-binding subunit TagH	84.3	48.4	50.4
MGA_2107	LOCUS_20890	sequence45:21069..21884(+)	partial			WP_127064234.1	glycosyltransferase	88.2	31.4	30.0
MGA_2108	LOCUS_20900	sequence45:21894..23258(+)	partial			WP_011228094.1	glycosyltransferase family 4 protein	63.7	75.1	24.7
MGA_2176	LOCUS_21580	sequence45:95219..96685(+)	partial			WP_002437845.1	YSIRK domain-containing triacylglycerol lipase GehC	94.5	65.3	60.3
MGA_2189	LOCUS_21710	sequence45:109960..112479(-)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	68.4	71.1	39.9
MGA_2263	LOCUS_22410	sequence56:43885..44550(-)	partial			WP_002485350.1	minor capsid protein	34.8	16.5	64.9
MGA_2266	LOCUS_22440	sequence56:46340..46927(-)	partial			WP_000921892.1	phage portal protein	89.7	35.8	41.0
MGA_2328	LOCUS_23060	sequence56:111696..111932(+)	partial			WP_001200542.1	fluoride efflux transporter CrcB	96.2	62.0	46.7
MGA_2336	LOCUS_23090	sequence60:1..602(+)	partial			WP_013399748.1	Rib/alpha-like domain-containing protein	29.6	2.0	48.4
MGA_2337	LOCUS_23100	sequence60:1012..1242(+)	internal_stop_codon	1240..1242(+),994..996(+)		WP_002287522.1	IS200/IS605-like element ISEfa4 family transposase	98.7	56.0	86.7
MGA_2339	LOCUS_23120	sequence61:1140..1301(-)	frameshift		1142	WP_002287525.1	IS200/IS605 family element RNA-guided endonuclease TnpB	100.0	13.9	86.8
MGA_2343	LOCUS_23140	sequence64:789..1085(-)	partial			WP_002456621.1	fatty acid desaturase	36.7	31.9	91.7
MGA_2344	LOCUS_23150	sequence65:113..586(-)	partial			WP_155767756.1	IS3 family transposase	98.1	39.7	56.5
MGA_2345	LOCUS_23160	sequence65:973..1260(-)	frameshift		999	WP_155767756.1	IS3 family transposase	97.9	21.4	38.3
MGA_2354	LOCUS_23240	sequence67:8017..8262(-)	frameshift		8297	WP_000579563.1	serine/threonine protein kinase Stk1	98.8	12.0	53.8
MGA_2362	LOCUS_23320	sequence67:16568..17407(-)	partial			WP_012803910.1	M48 family metallopeptidase	92.5	61.9	28.7
MGA_2403	LOCUS_23730	sequence67:60577..61467(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	86.5	54.9	44.1
MGA_2417	LOCUS_23870	sequence67:75710..75928(+)	partial			WP_000691527.1	putative immunity/bacteriocin fusion bifunctional protein	98.6	32.6	68.0
MGA_2418	LOCUS_23880	sequence67:76092..76283(-)	partial			WP_000861026.1	CHAP domain-containing protein	100.0	25.1	88.9
MGA_2421	LOCUS_23910	sequence67:77234..78106(-)	partial			WP_002485350.1	minor capsid protein	24.1	15.6	70.0
MGA_2436	LOCUS_24060	sequence67:93890..94486(+)	partial			WP_003357410.1	MerB-like organometallic lyase SaoL	53.0	55.9	34.0
MGA_2448	LOCUS_24180	sequence67:105244..105432(-)	partial			WP_000606480.1	YlbF family regulator	96.8	40.3	51.7
MGA_2455	LOCUS_24210	sequence71:160..894(+)	frameshift,internal_stop_codon	892..894(+),118..120(+),893..895(+)	442,396	WP_002485492.1	hypothetical protein	99.2	50.8	41.5
MGA_2534	LOCUS_24920	sequence78:70629..73178(+)	partial			WP_001058021.1	phosphotransferase	42.3	75.8	31.8
MGA_2535	LOCUS_24930	sequence78:73250..73522(-)	frameshift,internal_stop_codon	73596..73598(-),73608..73610(-)	73526	WP_095092556.1	IS1182 family transposase	92.2	14.8	53.0
MGA_2536	LOCUS_24940	sequence78:73608..73862(-)	frameshift,internal_stop_codon	73596..73598(-),73608..73610(-),73887..73889(-)	73526	WP_095092556.1	IS1182 family transposase	100.0	15.0	56.0
MGA_2537	LOCUS_24950	sequence78:73887..74864(-)	internal_stop_codon	73596..73598(-),73608..73610(-),73887..73889(-)		WP_002494449.1	IS1182-like element ISSep1 family transposase	100.0	58.1	53.8
MGA_2569	LOCUS_25270	sequence78:102306..102791(+)	partial			WP_002456621.1	fatty acid desaturase	51.6	73.5	73.5
MGA_2583	LOCUS_25330	sequence87:4120..4482(-)	partial			WP_000876756.1	HTH-type transcriptional regulator SarS	76.7	36.8	32.6
MGA_2600	LOCUS_25500	sequence87:20517..20744(+)	partial			WP_001548645.1	YneF family protein	76.0	60.0	66.7
MGA_2629	LOCUS_25790	sequence87:60197..63679(-)	partial			WP_000841404.1	fibronectin-binding protein FnbB	62.8	74.0	41.6