# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_81	LOCUS_00810	sequence1:95862..96488(+)	partial			WP_003245754.1	GNAT family protein	71.2	84.1	33.1
MGA_82	LOCUS_00820	sequence1:96575..96970(+)	partial			WP_012775247.1	DUF3955 domain-containing protein	55.0	46.8	45.9
MGA_147	LOCUS_01470	sequence1:166572..167288(+)	partial			WP_010922334.1	PASTA domain-containing protein	53.4	79.4	41.7
MGA_171	LOCUS_01710	sequence1:188352..188489(+)	partial			WP_000831905.1	50S ribosomal protein L34	57.8	59.1	92.3
MGA_186	LOCUS_01860	sequence1:201753..202604(+)	partial			WP_002389903.1	PTS transporter subunit EIIC	99.3	68.4	51.2
MGA_213	LOCUS_02130	sequence1:234641..236233(+)	partial			WP_011674709.1	C39 family peptidase	40.9	47.7	32.7
MGA_229	LOCUS_02290	sequence1:255868..256611(-)	partial			WP_011476538.1	CPBP family intramembrane metalloprotease	60.7	62.7	36.3
MGA_246	LOCUS_02460	sequence1:269087..269782(-)	partial			WP_200810866.1	hypothetical protein	57.1	46.2	36.4
MGA_262	LOCUS_02620	sequence1:274863..275378(+)	partial			WP_001019148.1	DUF1642 domain-containing protein	57.3	54.8	53.1
MGA_287	LOCUS_02870	sequence1:290114..293278(+)	partial			WP_010922451.1	phage tail spike protein	42.2	72.1	42.7
MGA_330	LOCUS_03300	sequence1:340412..340969(+)	partial			WP_002357803.1	TetR/AcrR family transcriptional regulator	30.8	28.1	38.6
MGA_331	LOCUS_03310	sequence1:341223..341531(+)	partial			WP_012775696.1	preprotein translocase subunit YajC	69.6	66.4	78.9
MGA_336	LOCUS_03360	sequence1:347191..349503(+)	partial			WP_000823833.1	SpaA isopeptide-forming pilin-related protein	32.9	34.7	38.1
MGA_346	LOCUS_03460	sequence1:360495..363023(+)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	43.6	42.4	26.7
MGA_376	LOCUS_03760	sequence1:396362..396907(+)	partial			WP_012027693.1	restriction endonuclease subunit S	97.8	46.6	28.4
MGA_378	LOCUS_03780	sequence1:397843..398445(-)	partial			WP_002287733.1	restriction endonuclease subunit S	87.5	41.8	27.4
MGA_381	LOCUS_03810	sequence1:401745..402881(-)	partial			WP_002262714.1	DUF6287 domain-containing protein	36.2	67.8	27.9
MGA_405	LOCUS_04050	sequence1:428895..431180(+)	partial			WP_001239465.1	SpaA isopeptide-forming pilin-related protein	35.9	37.0	34.5
MGA_489	LOCUS_04870	sequence1:515259..516242(-)	partial			WP_003063994.1	hypothetical protein	65.7	71.4	29.5
MGA_510	LOCUS_05080	sequence1:538527..538922(+)	partial			WP_011836364.1	competence type IV pilus minor pilin ComGG	90.8	71.9	27.7
MGA_600	LOCUS_05980	sequence1:632407..632940(+)	partial			WP_002920199.1	DUF2812 domain-containing protein	67.8	67.4	42.2
MGA_618	LOCUS_06160	sequence1:650994..651404(+)	frameshift		651389	WP_011475860.1	acyltransferase family protein	94.1	36.7	37.4
MGA_664	LOCUS_06620	sequence1:699523..700353(-)	partial			WP_010905214.1	glycerophosphodiester phosphodiesterase family protein	45.7	31.9	48.5
MGA_689	LOCUS_06870	sequence1:724499..724819(-)	partial			WP_011836504.1	phosphodiester glycosidase family protein	78.3	27.7	67.9
MGA_716	LOCUS_07130	sequence1:762310..763176(+)	frameshift		763146	WP_002901047.1	Cof-type HAD-IIB family hydrolase	96.9	59.7	54.8
MGA_717	LOCUS_07140	sequence1:763163..763690(+)	frameshift		763146	WP_000453148.1	Cof-type HAD-IIB family hydrolase	100.0	37.8	62.9
MGA_731	LOCUS_07280	sequence1:777428..778033(-)	partial			WP_102964529.1	IS481 family transposase	68.7	40.9	32.4
MGA_742	LOCUS_07390	sequence1:787332..787721(-)	internal_stop_codon	787332..787334(-)		WP_029172398.1	IS200/IS605-like element ISSsu4 family transposase	100.0	83.8	75.2
MGA_792	LOCUS_07890	sequence1:841923..842120(-)	partial			WP_100190734.1	IS3 family transposase	40.0	5.0	92.3
MGA_805	LOCUS_08020	sequence1:855307..856746(+)	partial			WP_012775304.1	endolytic transglycosylase MltG	87.1	69.8	64.7
MGA_824	LOCUS_08210	sequence1:871696..872178(+)	partial			WP_011101495.1	GNAT family N-acetyltransferase	73.8	81.0	40.3
MGA_831	LOCUS_08280	sequence1:880871..881119(+)	internal_stop_codon	881117..881119(+)		WP_000847065.1	LURP-one-related/scramblase family protein	100.0	50.9	43.9
MGA_832	LOCUS_08290	sequence1:881159..881365(+)	internal_stop_codon	881117..881119(+)		WP_000190192.1	LURP-one-related family protein	83.8	35.4	64.9
MGA_845	LOCUS_08420	sequence1:893057..893389(-)	frameshift		893080	WP_012775212.1	ISL3 family transposase	97.3	25.6	70.1
MGA_855	LOCUS_08520	sequence1:902406..902786(+)	partial			WP_010921915.1	nucleoside-triphosphate diphosphatase	97.6	36.3	43.9
MGA_878	LOCUS_08750	sequence1:921259..922884(+)	partial			WP_010905214.1	glycerophosphodiester phosphodiesterase family protein	24.8	33.8	46.4
MGA_895	LOCUS_08920	sequence1:940429..941208(-)	partial			WP_000676539.1	Glu-specific serine endopeptidase SspA	89.6	68.7	27.7
MGA_923	LOCUS_09200	sequence1:968182..968379(-)	partial			WP_100190734.1	IS3 family transposase	78.5	9.6	58.8
MGA_938	LOCUS_09350	sequence1:982038..986360(+)	partial			WP_002369215.1	fibrinogen-binding MSCRAMM adhesin Fss3	31.0	41.1	33.9
MGA_945	LOCUS_09420	sequence1:991187..993076(+)	partial			WP_010774274.1	phage tail tip lysozyme	97.3	67.4	41.8
MGA_948	LOCUS_09450	sequence1:995379..996254(+)	partial			WP_003429838.1	minor capsid protein	50.5	30.0	40.6
MGA_986	LOCUS_09830	sequence1:1035815..1036558(+)	frameshift,internal_stop_codon	1036556..1036558(+)	1036576	WP_012775212.1	ISL3 family transposase	89.5	52.9	88.2
MGA_987	LOCUS_09840	sequence1:1036644..1037171(+)	frameshift,internal_stop_codon	1036556..1036558(+)	1036576	WP_012775212.1	ISL3 family transposase	100.0	41.9	81.7
MGA_1012	LOCUS_10090	sequence1:1060579..1062549(+)	partial			WP_012775593.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	13.7	4.9	37.2
MGA_1039	LOCUS_10360	sequence1:1090524..1090898(-)	frameshift		1090909	WP_205010637.1	IS30 family transposase	100.0	39.1	79.0
MGA_1040	LOCUS_10370	sequence1:1090895..1091194(-)	frameshift,internal_stop_codon	1091222..1091224(-)	1090912	WP_205010637.1	IS30 family transposase	94.9	29.7	75.5
MGA_1041	LOCUS_10380	sequence1:1091222..1091476(-)	internal_stop_codon	1091222..1091224(-)		WP_205010637.1	IS30 family transposase	100.0	26.5	75.0
MGA_1053	LOCUS_10500	sequence1:1102116..1103348(+)	partial			WP_223217130.1	glycosyltransferase family 1 protein	83.7	74.9	38.8
MGA_1054	LOCUS_10510	sequence1:1103341..1104327(+)	partial			WP_011267456.1	glycosyltransferase	69.8	69.8	29.2
MGA_1126	LOCUS_11230	sequence1:1189396..1190106(+)	partial			WP_000021302.1	MmcQ/YjbR family DNA-binding protein	97.0	65.0	43.9
MGA_1130	LOCUS_11270	sequence1:1193842..1194576(+)	partial			WP_009967785.1	sporulation-specific Dnase NucB	38.1	68.4	49.5
MGA_1132	LOCUS_11290	sequence1:1195289..1195570(-)	frameshift,internal_stop_codon	1195722..1195724(-),1195662..1195664(-),1195647..1195649(-)	1195585,1195700,1195718,1195435,1195631	WP_115283723.1	IS3 family transposase	54.8	11.3	70.6
MGA_1133	LOCUS_11300	sequence1:1195989..1196117(-)	frameshift,internal_stop_codon	1196246..1196248(-),1196231..1196233(-),1196171..1196173(-),1195720..1195722(-)	1195905,1196266,1195996,1195713	WP_120719025.1	IS3 family transposase	95.2	8.9	67.5
MGA_1134	LOCUS_11310	sequence1:1196201..1196560(-)	frameshift,internal_stop_codon	1196201..1196203(-)	1196555	WP_081026662.1	IS3 family transposase	98.3	51.7	62.8
MGA_1140	LOCUS_11370	sequence1:1200719..1201393(+)	frameshift		1201363	WP_100190734.1	IS3 family transposase	97.8	42.0	71.7
MGA_1141	LOCUS_11380	sequence1:1201618..1202274(+)	frameshift		1201363	WP_100190734.1	IS3 family transposase	100.0	41.8	85.3
MGA_1189	LOCUS_11860	sequence1:1261713..1262099(-)	frameshift		1262146	WP_012775212.1	ISL3 family transposase	100.0	30.6	75.8
MGA_1190	LOCUS_11870	sequence1:1262336..1263088(+)	partial			WP_000564846.1	ISAs1-like element IS1548 family transposase	87.2	57.8	91.3
MGA_1200	LOCUS_11970	sequence1:1278741..1279637(+)	partial			WP_011121066.1	alpha/beta hydrolase	74.5	70.9	30.8
MGA_1221	LOCUS_12180	sequence1:1303146..1303322(+)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1266	LOCUS_12630	sequence1:1348247..1348888(-)	partial			WP_015944392.1	helix-turn-helix transcriptional regulator	37.6	38.5	46.2
MGA_1270	LOCUS_12670	sequence1:1354122..1362419(+)	partial			WP_002379133.1	isopeptide-forming domain-containing fimbrial protein	20.1	58.7	25.7
MGA_1271	LOCUS_12680	sequence1:1362632..1363990(+)	partial			WP_012775593.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	33.4	8.7	31.7
MGA_1372	LOCUS_13690	sequence1:1473261..1473899(+)	partial			WP_167493974.1	antibiotic biosynthesis monooxygenase	77.8	72.3	27.5
MGA_1396	LOCUS_13930	sequence1:1499307..1499735(-)	partial			WP_012775625.1	DUF6287 domain-containing protein	59.2	33.7	56.0
MGA_1410	LOCUS_14070	sequence1:1511008..1513482(-)	partial			WP_000671444.1	fibronectin-binding SSURE repeat adhesin PavB	88.8	64.8	52.9
MGA_1412	LOCUS_14090	sequence1:1513840..1514532(-)	internal_stop_codon	1513840..1513842(-)		WP_011837522.1	alpha/beta fold hydrolase	80.4	61.0	44.3
MGA_1443	LOCUS_14400	sequence1:1543574..1544929(-)	partial			WP_012066536.1	carbohydrate ABC transporter permease	46.6	74.3	29.5
MGA_1458	LOCUS_14550	sequence1:1559315..1559545(-)	internal_stop_codon	1559561..1559563(-)		WP_014636388.1	histidinol-phosphate transaminase	92.1	19.9	52.9
MGA_1459	LOCUS_14560	sequence1:1559561..1560385(-)	internal_stop_codon	1559561..1559563(-)		WP_014636388.1	histidinol-phosphate transaminase	98.5	76.9	56.7
MGA_1460	LOCUS_14570	sequence1:1560630..1563428(-)	partial			WP_061588157.1	pneumococcal-type histidine triad protein	38.6	41.2	54.6
MGA_1472	LOCUS_14690	sequence1:1575301..1575906(+)	partial			WP_102964529.1	IS481 family transposase	68.7	40.9	32.4
MGA_1478	LOCUS_14750	sequence1:1579535..1579699(-)	partial			WP_010922516.1	hypothetical protein	51.9	45.9	92.9
MGA_1513	LOCUS_15100	sequence1:1617434..1618366(-)	partial			WP_010965627.1	sugar transferase	81.3	55.3	42.4
MGA_1515	LOCUS_15120	sequence1:1619457..1620587(-)	partial			WP_011101286.1	glycosyltransferase	67.0	67.0	29.1
MGA_1521	LOCUS_15180	sequence1:1625946..1637270(-)	partial			WP_000489923.1	alpha-like surface protein	25.6	69.2	33.4
MGA_1523	LOCUS_15200	sequence1:1638484..1639377(+)	frameshift,internal_stop_codon	1639276..1639278(+),1638481..1638483(+)	1639257,1639524	WP_012775212.1	ISL3 family transposase	86.9	61.7	81.4
MGA_1528	LOCUS_15250	sequence1:1644451..1645377(-)	partial			WP_011101287.1	glycosyltransferase family 2 protein	70.8	70.8	38.5
MGA_1535	LOCUS_15320	sequence1:1652869..1653222(+)	frameshift		1653189,1653435,1653117	WP_000160552.1	IS30 family transposase	70.9	21.4	80.7
MGA_1536	LOCUS_15330	sequence1:1653215..1653439(+)	frameshift		1653189,1653435,1653117	WP_000160552.1	IS30 family transposase	98.6	18.8	91.8
MGA_1537	LOCUS_15340	sequence1:1653459..1654037(+)	frameshift		1653434,1653188	WP_121836467.1	IS30 family transposase	99.0	60.3	91.6
MGA_1538	LOCUS_15350	sequence1:1655237..1656070(+)	partial			WP_011461245.1	MBOAT family protein	99.3	58.5	39.9
MGA_1541	LOCUS_15380	sequence1:1658445..1659425(+)	frameshift,internal_stop_codon	1659324..1659326(+)	1659305	WP_093649644.1	ISL3 family transposase	88.0	45.3	72.1
MGA_1542	LOCUS_15390	sequence1:1659416..1659802(+)	frameshift,internal_stop_codon	1659324..1659326(+)	1659305	WP_012775212.1	ISL3 family transposase	100.0	30.6	75.0
MGA_1543	LOCUS_15400	sequence1:1659934..1664106(-)	partial			WP_000278319.1	CshA/CshB family fibrillar adhesin-related protein	15.8	5.2	31.0
MGA_1544	LOCUS_15410	sequence1:1664630..1664806(+)	frameshift		1664803,1664933	WP_148255720.1	IS630 family transposase	70.7	11.7	63.4
MGA_1545	LOCUS_15420	sequence1:1665067..1665270(+)	frameshift		1665264,1664933	WP_115265112.1	IS630 family transposase	92.5	18.9	69.7
MGA_1615	LOCUS_16120	sequence1:1734361..1735116(-)	internal_stop_codon	1735306..1735308(-)		WP_115270946.1	IS110 family transposase	100.0	62.8	85.7
MGA_1616	LOCUS_16130	sequence1:1735306..1735563(-)	internal_stop_codon	1735306..1735308(-)		WP_012972561.1	IS110 family transposase	100.0	21.2	89.4
MGA_1617	LOCUS_16140	sequence1:1736126..1739062(-)	partial			WP_002263335.1	GBS Bsp-like repeat-containing protein	74.8	72.3	35.3
MGA_1633	LOCUS_16300	sequence1:1754838..1755221(-)	internal_stop_codon	1754838..1754840(-)		WP_010905214.1	glycerophosphodiester phosphodiesterase family protein	56.7	17.6	45.8
MGA_1665	LOCUS_16620	sequence1:1786445..1791832(-)	partial			WP_001178115.1	SpaA isopeptide-forming pilin-related protein	30.0	22.7	34.2
MGA_1677	LOCUS_16740	sequence1:1807008..1807439(-)	partial			WP_011837153.1	GNAT family N-acetyltransferase	62.9	64.1	46.2
MGA_1678	LOCUS_16750	sequence1:1807463..1807702(-)	partial			WP_002262774.1	NUDIX hydrolase	98.7	50.0	83.3
MGA_1694	LOCUS_16910	sequence1:1823633..1824679(-)	frameshift		1824708	WP_012870407.1	PTS fructose transporter subunit IIBC	93.1	70.9	44.2
MGA_1696	LOCUS_16930	sequence1:1825026..1825490(-)	partial			WP_002288299.1	PTS fructose transporter subunit IIABC	92.9	22.1	35.7
MGA_1699	LOCUS_16960	sequence1:1828379..1829128(+)	frameshift		1829125	WP_002261920.1	GIY-YIG nuclease family protein	100.0	73.5	76.3
MGA_1700	LOCUS_16970	sequence1:1829136..1829387(+)	frameshift		1829119	WP_040804636.1	GIY-YIG nuclease family protein	94.0	23.5	73.1
MGA_1701	LOCUS_16980	sequence1:1829649..1829939(-)	internal_stop_codon	1829967..1829969(-)		WP_012027506.1	GNAT family N-acetyltransferase	79.2	56.3	64.5
MGA_1722	LOCUS_17190	sequence1:1852119..1852742(-)	partial			WP_003818529.1	TetR/AcrR family transcriptional regulator	76.8	74.1	28.7
MGA_1764	LOCUS_17610	sequence1:1893948..1894235(-)	internal_stop_codon	1894508..1894510(-)		WP_012775212.1	ISL3 family transposase	75.8	17.2	66.7
MGA_1765	LOCUS_17620	sequence1:1894229..1894396(-)	internal_stop_codon	1894508..1894510(-)		WP_012775212.1	ISL3 family transposase	100.0	13.2	90.9
MGA_1766	LOCUS_17630	sequence1:1894508..1895533(-)	internal_stop_codon	1894508..1894510(-)		WP_012775212.1	ISL3 family transposase	95.3	77.8	88.6
MGA_1773	LOCUS_17700	sequence1:1898854..1901934(-)	partial			WP_048065292.1	DUF2341 domain-containing protein	49.2	24.1	23.4
MGA_1774	LOCUS_17710	sequence1:1902403..1902759(+)	internal_stop_codon	1902319..1902321(+)		WP_150880979.1	ISL3 family transposase	98.3	28.4	67.2
MGA_1778	LOCUS_17750	sequence1:1904045..1913335(-)	partial			WP_051754043.1	polymorphic toxin-type HINT domain-containing protein	38.9	36.2	30.0
MGA_1780	LOCUS_17770	sequence1:1913985..1914536(-)	partial			WP_000095595.1	class B sortase	93.4	65.7	34.1
MGA_1790	LOCUS_17870	sequence1:1925747..1926019(+)	partial			WP_001254393.1	YiaA/YiaB family inner membrane protein	73.3	84.6	50.0
MGA_1841	LOCUS_18380	sequence1:1977350..1977922(+)	partial			WP_011674714.1	C39 family peptidase	65.3	35.2	45.3
MGA_1849	LOCUS_18460	sequence1:1985418..1988438(-)	partial			WP_000516926.1	VaFE repeat-containing surface-anchored protein	33.9	31.0	34.8
MGA_1863	LOCUS_18600	sequence1:2003176..2003409(-)	partial			WP_012774992.1	hypothetical protein	79.2	25.4	55.7
MGA_1903	LOCUS_18980	sequence2:607..2019(+)	frameshift		560	WP_010922453.1	hypothetical protein	100.0	60.4	56.9
MGA_1905	LOCUS_19000	sequence2:2712..5876(+)	partial			WP_010922451.1	phage tail spike protein	42.2	72.1	42.7
MGA_1919	LOCUS_19140	sequence2:14523..15218(-)	partial			WP_200810866.1	hypothetical protein	57.1	46.2	36.4
MGA_1935	LOCUS_19300	sequence2:20299..20715(+)	partial			WP_001019148.1	DUF1642 domain-containing protein	70.3	54.2	53.6
MGA_1941	LOCUS_19360	sequence2:23562..23918(+)	frameshift		23882	WP_010922468.1	phage portal protein	89.8	25.4	57.0
MGA_1942	LOCUS_19370	sequence2:23887..24732(+)	frameshift		23882	WP_010922468.1	phage portal protein	98.6	65.9	69.1
MGA_1943	LOCUS_19380	sequence2:24733..25626(+)	frameshift		25776,25617,25684,25733	WP_000227333.1	polymorphic toxin type 50 domain-containing protein	99.7	72.7	62.5
MGA_1944	LOCUS_19390	sequence2:25757..25963(+)	frameshift		25739,25620,25782,25687	WP_000227333.1	polymorphic toxin type 50 domain-containing protein	89.7	14.8	45.9
