{
    "type": "genome",
    "identifier": "GCF_003627955.1",
    "organism": "Sphingobacterium puteale",
    "title": "Sphingobacterium puteale",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Nanjing Institute of Geography and Limnology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003627955.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10160177",
        "wgs_master": "RBWS00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2420510",
        "species_taxid": "2420510",
        "organism_name": "Sphingobacterium puteale",
        "infraspecific_name": "strain=M05W1-28",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/10/10",
        "asm_name": "ASM362795v1",
        "asm_submitter": "Nanjing Institute of Geography and Limnology",
        "gbrs_paired_asm": "GCA_003627955.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/627/955/GCF_003627955.1_ASM362795v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6719458",
        "genome_size_ungapped": "6719458",
        "gc_percent": "40.500000",
        "replicon_count": "0",
        "scaffold_count": "49",
        "contig_count": "49",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003627955.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "5613",
        "protein_coding_gene_count": "5506",
        "non_coding_gene_count": "79",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-10-10",
    "dateModified": "2018-10-10",
    "datePublished": "2018-10-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sphingobacterium puteale"
        ],
        "sample_taxid": [
            "2420510"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Zhengzhou city"
        ],
        "sample_host_location_id": [],
        "data_size": "1.918 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6719458",
        "Number of Sequences": "49",
        "Longest Sequences (bp)": "841035",
        "N50 (bp)": "255851",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.7",
        "Number of CDSs": "5447",
        "Average Protein Length": "357.7",
        "Coding Ratio (%)": "87.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "70",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sphingobacterium puteale",
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                "relation_to_type": "type",
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            },
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium paramultivorum",
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                "species_taxid": 2886510,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium siyangense",
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                "species_taxid": 459529,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium multivorum",
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                "species_taxid": 28454,
                "relation_to_type": "type",
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                "matched_fragments": 863,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium thalpophilum",
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                "accession": "GCA_901482695.1",
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                "relation_to_type": "type",
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                "matched_fragments": 813,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium faecale",
                "strain": "strain=C459-1",
                "accession": "GCA_016746095.1",
                "taxid": 2803775,
                "species_taxid": 2803775,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8371,
                "matched_fragments": 112,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobacterium chungjuense",
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                "taxid": 2675553,
                "species_taxid": 2675553,
                "relation_to_type": "type",
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                "matched_fragments": 78,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Sphingobacterium corticibacter",
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                "accession": "GCA_003076635.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "accession": "GCF_003627955.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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        "puteale"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}