{
    "type": "genome",
    "identifier": "GCF_003664185.1",
    "organism": "Tenacibaculum discolor",
    "title": "Tenacibaculum discolor",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003664185.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN08779091",
        "wgs_master": "RCCS00000000.1",
        "refseq_category": "reference genome",
        "taxid": "361581",
        "species_taxid": "361581",
        "organism_name": "Tenacibaculum discolor",
        "infraspecific_name": "strain=DSM 18842",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/10/15",
        "asm_name": "ASM366418v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_003664185.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/664/185/GCF_003664185.1_ASM366418v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3376020",
        "genome_size_ungapped": "3376020",
        "gc_percent": "31.500000",
        "replicon_count": "0",
        "scaffold_count": "12",
        "contig_count": "12",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003664185.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "3190",
        "protein_coding_gene_count": "3125",
        "non_coding_gene_count": "54",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-10-15",
    "dateModified": "2018-10-15",
    "datePublished": "2018-10-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Tenacibaculum discolor"
        ],
        "sample_taxid": [
            "361581"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain: Galicia"
        ],
        "sample_host_location_id": [],
        "data_size": "0.931 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3376020",
        "Number of Sequences": "12",
        "Longest Sequences (bp)": "643575",
        "N50 (bp)": "477879",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.6",
        "Number of CDSs": "3125",
        "Average Protein Length": "324.5",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Tenacibaculum discolor",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Tenacibaculum singaporense",
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                "taxid": 2358479,
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                "relation_to_type": "type",
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                "ani": 90.0136,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "ani_threshold": 95,
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            },
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                "species_taxid": 104268,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum mesophilum",
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                "species_taxid": 104268,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum gallaicum",
                "strain": "strain=DSM 18841",
                "accession": "GCA_003387615.1",
                "taxid": 561505,
                "species_taxid": 561505,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum mesophilum",
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                "accession": "GCA_009362255.1",
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                "species_taxid": 104268,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum haliotis",
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                "accession": "GCA_025215075.1",
                "taxid": 1888914,
                "species_taxid": 1888914,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum todarodis",
                "strain": "strain=LPB0136",
                "accession": "GCA_001889045.1",
                "taxid": 1850252,
                "species_taxid": 1850252,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3385,
                "matched_fragments": 375,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tenacibaculum aquimarinum",
                "strain": "strain=K20-16",
                "accession": "GCA_022478115.1",
                "taxid": 2910675,
                "species_taxid": 2910675,
                "relation_to_type": "type",
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                "ani": 78.3136,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter septentrionalilitoris",
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                "accession": "GCA_009832745.1",
                "taxid": 2494657,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter cellanae",
                "strain": "strain=SM13",
                "accession": "GCA_017569185.1",
                "taxid": 2818493,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3763,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_003664185.1",
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                "total_fragments": 1119,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum",
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                "min_intra_species_ani": "97.89",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}