{ "type": "genome", "identifier": "GCF_003688855.1", "organism": "Tessaracoccus antarcticus", "title": "Tessaracoccus antarcticus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "shandong university", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003688855.1", "bioproject": "PRJNA224116", "biosample": "SAMN10250233", "wgs_master": "REFW00000000.1", "refseq_category": "reference genome", "taxid": "2479848", "species_taxid": "2479848", "organism_name": "Tessaracoccus antarcticus", "infraspecific_name": "strain=JDX10", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/10/25", "asm_name": "ASM368885v1", "asm_submitter": "shandong university", "gbrs_paired_asm": "GCA_003688855.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/688/855/GCF_003688855.1_ASM368885v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3649759", "genome_size_ungapped": "3649759", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "13", "contig_count": "13", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003688855.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3331", "protein_coding_gene_count": "3241", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-10-25", "dateModified": "2018-10-25", "datePublished": "2018-10-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Tessaracoccus antarcticus" ], "sample_taxid": [ "2479848" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: weihai" ], 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"strain": "strain=Marseille-P6184", "accession": "GCA_900607225.1", "taxid": 2220000, "species_taxid": 2220000, "relation_to_type": "type", "validated": true, "ani": 78.2094, "matched_fragments": 248, "total_fragments": 1212, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tessaracoccus flavescens", "strain": "strain=SST-39T", "accession": "GCA_001998865.1", "taxid": 399497, "species_taxid": 399497, "relation_to_type": "type", "validated": true, "ani": 78.0764, "matched_fragments": 338, "total_fragments": 1212, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arachnia propionica", "strain": "strain=NBRC 14587", "accession": "GCA_001592325.1", "taxid": 1750, "species_taxid": 1750, "relation_to_type": "type", "validated": true, "ani": 77.9636, "matched_fragments": 257, "total_fragments": 1212, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arachnia propionica", "strain": "strain=NCTC12967", "accession": 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