{
    "type": "genome",
    "identifier": "GCF_003752405.1",
    "organism": "Bogoriella caseilytica",
    "title": "Bogoriella caseilytica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003752405.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10363439",
        "wgs_master": "RKHK00000000.1",
        "refseq_category": "reference genome",
        "taxid": "56055",
        "species_taxid": "56055",
        "organism_name": "Bogoriella caseilytica",
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        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/11/15",
        "asm_name": "ASM375240v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_003752405.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/752/405/GCF_003752405.1_ASM375240v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3235396",
        "genome_size_ungapped": "3235396",
        "gc_percent": "69.000000",
        "replicon_count": "0",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003752405.1-RS_2024_05_04",
        "annotation_date": "2024-05-04",
        "total_gene_count": "2918",
        "protein_coding_gene_count": "2847",
        "non_coding_gene_count": "54",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-11-15",
    "dateModified": "2018-11-15",
    "datePublished": "2018-11-15",
    "_annotation": {
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        "sample_organism": [
            "Bogoriella caseilytica"
        ],
        "sample_taxid": [
            "56055"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        ],
        "sample_host_location_id": [],
        "data_size": "0.878 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
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        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
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        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3235396",
        "N50 (bp)": "3235396",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.9",
        "Number of CDSs": "2896",
        "Average Protein Length": "344.4",
        "Coding Ratio (%)": "92.5",
        "Number of rRNAs": "6",
        "Number of tRNAs": "55",
        "Number of CRISPRs": "0"
    },
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermopolyspora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
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        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 30.0,
        "optimum_tmp": null,
        "optimum_ph": null,
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        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
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        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Bogoriella",
        "caseilytica"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}