{ "type": "genome", "identifier": "GCF_003814695.1", "organism": "Myceligenerans xiligouense", "title": "Myceligenerans xiligouense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003814695.1", "bioproject": "PRJNA224116", "biosample": "SAMN10363425", "wgs_master": "RKQZ00000000.1", "refseq_category": "reference genome", "taxid": "253184", "species_taxid": "253184", "organism_name": "Myceligenerans xiligouense", "infraspecific_name": "strain=DSM 15700", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/11/23", "asm_name": "ASM381469v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_003814695.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/814/695/GCF_003814695.1_ASM381469v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4723192", "genome_size_ungapped": "4723192", "gc_percent": "71.500000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003814695.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "4108", "protein_coding_gene_count": "4020", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-11-23", "dateModified": "2018-11-23", "datePublished": "2018-11-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Myceligenerans xiligouense" ], "sample_taxid": [ "253184" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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{ "organism_name": "Promicromonospora kroppenstedtii", "strain": "strain=DSM 19349", "accession": "GCA_000515355.1", "taxid": 440482, "species_taxid": 440482, "relation_to_type": "type", "validated": true, "ani": 80.1244, "matched_fragments": 800, "total_fragments": 1574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora umidemergens", "strain": "strain=DSM 22081", "accession": "GCA_024171995.1", "taxid": 629679, "species_taxid": 629679, "relation_to_type": "type", "validated": true, "ani": 80.0575, "matched_fragments": 835, "total_fragments": 1574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Isoptericola jiangsuensis", "strain": "strain=DSM 21863", "accession": "GCA_002563715.1", "taxid": 548579, "species_taxid": 548579, "relation_to_type": "type", "validated": true, "ani": 79.4377, "matched_fragments": 625, "total_fragments": 1574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"GCA_016464425.1", "taxid": 2072922, "species_taxid": 2072922, "relation_to_type": "type", "validated": true, "ani": 77.5948, "matched_fragments": 525, "total_fragments": 1574, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003814695.1", "gtdb_species": "s__Myceligenerans xiligouense", "ani": 100.0, "matched_fragments": 1574, "total_fragments": 1574, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Myceligenerans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_014892515.1", "gtdb_species": "s__Myceligenerans sp014892515", "ani": 88.2612, "matched_fragments": 1203, "total_fragments": 1574, "gtdb_taxonomy": 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