{ "tc_result": [ { "organism_name": "Mycoplasma struthionis", "strain": "strain=237IA", "accession": "GCA_003855455.1", "taxid": 538220, "species_taxid": 538220, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 241, "total_fragments": 245, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Metamycoplasma anseris", "strain": "strain=ATCC 49234", "accession": "GCA_003285045.1", "taxid": 92400, "species_taxid": 92400, "relation_to_type": "type", "validated": true, "ani": 79.1116, "matched_fragments": 72, "total_fragments": 245, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma anseris", "strain": "strain=ATCC 49234", "accession": "GCA_000702805.1", "taxid": 92400, "species_taxid": 92400, "relation_to_type": "type", "validated": true, "ani": 78.8162, "matched_fragments": 71, "total_fragments": 245, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma orale", "strain": "strain=NCTC10112", "accession": "GCA_900660435.1", "taxid": 2121, "species_taxid": 2121, "relation_to_type": "type", "validated": true, "ani": 77.8622, "matched_fragments": 64, "total_fragments": 245, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metamycoplasma orale", "strain": "strain=ATCC 23714", "accession": "GCA_000420105.1", "taxid": 2121, "species_taxid": 2121, "relation_to_type": "type", "validated": true, "ani": 77.6398, "matched_fragments": 67, "total_fragments": 245, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003855455.1", "gtdb_species": "s__Metamycoplasma struthionis", "ani": 100.0, "matched_fragments": 244, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "98.82", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_000620005.1", "gtdb_species": "s__Metamycoplasma spumans", "ani": 79.0584, "matched_fragments": 86, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006491995.1", "gtdb_species": "s__Metamycoplasma neophronis", "ani": 78.9881, "matched_fragments": 72, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000702805.1", "gtdb_species": "s__Metamycoplasma anseris", "ani": 78.8162, "matched_fragments": 71, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900476125.1", "gtdb_species": "s__Metamycoplasma alkalescens", "ani": 78.783, "matched_fragments": 76, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.14", "min_intra_species_ani": "98.30", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_006385795.1", "gtdb_species": "s__Metamycoplasma falconis", "ani": 78.6315, "matched_fragments": 81, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003332325.1", "gtdb_species": "s__Metamycoplasma phocidae", "ani": 78.5439, "matched_fragments": 73, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900660445.2", "gtdb_species": "s__Metamycoplasma salivarium", "ani": 78.3145, "matched_fragments": 56, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000420105.1", "gtdb_species": "s__Metamycoplasma orale", "ani": 77.6883, "matched_fragments": 66, "total_fragments": 245, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Metamycoplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }