{ "type": "genome", "identifier": "GCF_003933245.1", "organism": "Maribacter algicola", "title": "Maribacter algicola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chung Ang University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003933245.1", "bioproject": "PRJNA224116", "biosample": "SAMN09812349", "wgs_master": "QUSX00000000.1", "refseq_category": "reference genome", "taxid": "2498892", "species_taxid": "2498892", "organism_name": "Maribacter algicola", "infraspecific_name": "strain=PoM-212", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/12/10", "asm_name": "ASM393324v1", "asm_submitter": "Chung Ang University", "gbrs_paired_asm": "GCA_003933245.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/933/245/GCF_003933245.1_ASM393324v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4114314", "genome_size_ungapped": "4114314", "gc_percent": "41.000000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003933245.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3572", "protein_coding_gene_count": "3515", "non_coding_gene_count": "42", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-12-10", "dateModified": "2018-12-10", "datePublished": "2018-12-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Maribacter algicola" ], "sample_taxid": [ "2498892" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Incheon" ], "sample_host_location_id": [], "data_size": "1.165 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4114314", "Number of Sequences": "7", "Longest Sequences (bp)": "2184756", "N50 (bp)": "2184756", "Gap Ratio (%)": "0.000049", "GCcontent (%)": "41.0", "Number of CDSs": "3494", "Average Protein Length": "353.9", "Coding Ratio (%)": "90.2", "Number of rRNAs": "1", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Maribacter algicola", "strain": "strain=PoM-212", "accession": "GCA_003933245.1", "taxid": 2498892, "species_taxid": 2498892, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1369, "total_fragments": 1370, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Maribacter aurantiacus", "strain": "strain=KCTC 52409", "accession": "GCA_005780245.1", "taxid": 1882343, "species_taxid": 1882343, "relation_to_type": "type", "validated": true, "ani": 85.0284, "matched_fragments": 978, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter flavus", "strain": "strain=KCTC 42508", "accession": "GCA_008386635.1", "taxid": 1658664, "species_taxid": 1658664, "relation_to_type": "type", "validated": true, "ani": 84.8429, "matched_fragments": 1015, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter cobaltidurans", "strain": "strain=B1", "accession": "GCA_002269385.1", "taxid": 1178778, "species_taxid": 1178778, "relation_to_type": "type", "validated": true, "ani": 82.5634, "matched_fragments": 815, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter 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