# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_53	LOCUS_00530	sequence001:55370..>57070(-)	partial			WP_000384691.1	isoleucine--tRNA ligase	100.0	61.9	80.6
MGA_115	LOCUS_01080	sequence011:11938..12840(+)	partial			WP_010922662.1	lactose-specific PTS transporter subunit EIIC	97.3	51.9	53.9
MGA_132	LOCUS_01250	sequence011:20765..21388(+)	partial			WP_001231960.1	ERF family protein	69.6	65.2	58.2
MGA_138	LOCUS_01310	sequence011:23711..24928(+)	partial			WP_012028597.1	replicative DNA helicase	60.7	57.0	39.9
MGA_185	LOCUS_01780	sequence012:47081..52096(-)	partial			WP_015704442.1	putative mucin/carbohydrate-binding domain-containing protein	34.8	58.5	28.2
MGA_193	LOCUS_01850	sequence013:5338..7095(-)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	46.7	17.0	42.0
MGA_236	LOCUS_02240	sequence021:34092..37022(-)	partial			WP_000841404.1	fibronectin-binding protein FnbB	67.3	75.1	25.8
MGA_240	LOCUS_02280	sequence021:41714..41866(-)	partial			WP_002262727.1	PTS ascorbate transporter subunit IIC	98.0	10.1	67.3
MGA_248	LOCUS_02360	sequence021:49261..49998(+)	internal_stop_codon	49996..49998(+)		WP_011082549.1	IS1182-like element ISSep1 family transposase	100.0	44.3	74.3
MGA_249	LOCUS_02370	sequence021:50391..50594(+)	frameshift		50319	WP_157582437.1	transposase	91.0	47.3	47.5
MGA_252	LOCUS_02400	sequence021:51473..51703(-)	partial			WP_001557163.1	ISL3-like element IS1181 family transposase	93.4	16.2	45.1
MGA_254	LOCUS_02410	sequence023:1..706(+)	partial			WP_013399748.1	Rib/alpha-like domain-containing protein	70.9	5.6	39.5
MGA_261	LOCUS_02480	sequence023:8535..9179(-)	partial			WP_001549718.1	YdcF family protein	83.6	55.6	44.3
MGA_289	LOCUS_02670	sequence032:1161..2090(-)	partial			WP_000584628.1	AAA family ATPase	99.7	31.5	57.1
MGA_290	LOCUS_02680	sequence032:2087..4027(-)	frameshift		2179	WP_000584628.1	AAA family ATPase	93.2	61.6	52.2
MGA_298	LOCUS_02760	sequence032:9734..10069(-)	internal_stop_codon	10115..10117(-)		WP_000814826.1	dicarboxylate/amino acid:cation symporter	91.9	24.8	60.8
MGA_299	LOCUS_02770	sequence032:10115..11020(-)	internal_stop_codon	10115..10117(-)		WP_000814809.1	dicarboxylate/amino acid:cation symporter	98.0	68.4	40.5
MGA_324	LOCUS_03010	sequence034:19401..20087(-)	partial			WP_002681843.1	PTS sugar transporter subunit IIC	99.1	66.9	46.1
MGA_331	LOCUS_03080	sequence034:27166..27909(-)	partial			WP_001829860.1	serine protease	76.1	62.1	32.4
MGA_362	LOCUS_03300	sequence042:1..801(+)	partial			WP_000794614.1	fibronectin-binding protein FnbA	98.5	23.8	31.3
MGA_377	LOCUS_03440	sequence044:17525..19399(+)	partial			WP_002370472.1	glycosyltransferase family A protein	34.6	44.7	34.1
MGA_402	LOCUS_03640	sequence049:143..298(-)	frameshift,internal_stop_codon	143..145(-)	130	WP_001557163.1	ISL3-like element IS1181 family transposase	92.2	10.7	51.1
MGA_407	LOCUS_03650	sequence052:636..791(-)	internal_stop_codon	636..638(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	92.2	10.7	55.3
MGA_408	LOCUS_03660	sequence053:44..277(-)	internal_stop_codon	308..310(-)		WP_001557163.1	ISL3-like element IS1181 family transposase	94.8	16.6	46.6
MGA_449	LOCUS_04040	sequence058:935..1192(-)	internal_stop_codon	935..937(-)		WP_001829897.1	SprT family protein	100.0	56.3	70.6
MGA_487	LOCUS_04400	sequence060:38131..38841(-)	partial			WP_095092556.1	IS1182 family transposase	64.8	31.4	54.5
MGA_488	LOCUS_04410	sequence060:38898..39068(-)	partial			WP_002494449.1	IS1182-like element ISSep1 family transposase	67.9	6.8	73.7
MGA_584	LOCUS_05310	sequence071:5791..7287(+)	partial			WP_005789151.1	sodium:solute symporter family protein	69.5	70.2	25.9
MGA_631	LOCUS_05770	sequence072:4740..5621(-)	partial			WP_011403679.1	NAD(P)H-binding protein	47.4	28.5	30.7
MGA_666	LOCUS_06120	sequence073:16346..17560(+)	internal_stop_codon	17558..17560(+)		WP_010964653.1	FGGY-family carbohydrate kinase	98.3	74.3	52.6
MGA_667	LOCUS_06130	sequence073:17576..17962(+)	internal_stop_codon	17558..17560(+)		WP_008760641.1	FGGY-family carbohydrate kinase	88.3	21.7	45.7
MGA_675	LOCUS_06210	sequence073:24783..26372(+)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	28.4	9.4	38.1
MGA_676	LOCUS_06220	sequence074:1..510(+)	partial			WP_000794614.1	fibronectin-binding protein FnbA	74.0	13.1	36.0
MGA_693	LOCUS_06380	sequence075:9616..12792(+)	partial			WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	71.2	76.6	26.5
MGA_694	LOCUS_06390	sequence075:12792..13247(+)	partial			WP_002989953.1	type II CRISPR-associated endonuclease Cas1	75.5	39.4	33.3
MGA_702	LOCUS_06470	sequence076:6909..7955(-)	internal_stop_codon	8238..8240(-)		WP_000279361.1	PTS system trehalose-specific EIIBC component	98.3	71.8	71.6
MGA_753	LOCUS_06980	sequence078:42317..42544(-)	partial			WP_001548645.1	YneF family protein	76.0	60.0	66.7
MGA_783	LOCUS_07280	sequence079:19170..19592(+)	partial			WP_011057519.1	GNAT family N-acetyltransferase	76.4	64.9	32.8
MGA_823	LOCUS_07650	sequence082:20597..20827(+)	frameshift		20779	WP_001792547.1	alpha/beta hydrolase	88.2	22.8	37.3
MGA_824	LOCUS_07660	sequence082:20785..21468(+)	frameshift		20779	WP_001792547.1	alpha/beta hydrolase	98.7	76.2	63.8
MGA_877	LOCUS_08170	sequence085:20740..20961(+)	frameshift		20952	WP_000708690.1	allophanate hydrolase subunit 1	97.3	30.1	57.7
MGA_878	LOCUS_08180	sequence085:20958..21419(+)	frameshift		20952	WP_000708690.1	allophanate hydrolase subunit 1	94.1	61.0	50.0
MGA_915	LOCUS_08530	sequence088:2316..2996(+)	frameshift		2981	WP_003548693.1	DUF1002 domain-containing protein	87.6	64.2	38.5
MGA_916	LOCUS_08540	sequence088:3461..4450(+)	partial			WP_048066275.1	PKD domain-containing protein	75.4	14.6	34.0
MGA_920	LOCUS_08570	sequence089:1671..2258(-)	partial			WP_011669017.1	lactose-specific PTS transporter subunit EIIC	94.4	35.9	45.0
MGA_922	LOCUS_08590	sequence089:2542..3102(-)	partial			WP_001795785.1	hypothetical protein	30.6	78.4	58.6
MGA_929	LOCUS_08660	sequence089:7628..9997(-)	partial			WP_000582139.1	phage tail spike protein	93.7	58.7	59.5
MGA_930	LOCUS_08670	sequence089:10016..11743(-)	partial			WP_000582139.1	phage tail spike protein	98.8	44.8	66.4
MGA_932	LOCUS_08690	sequence089:13246..15132(-)	partial			WP_000504568.1	phage tail tape measure protein	99.4	41.4	50.5
MGA_935	LOCUS_08720	sequence089:15967..18258(-)	internal_stop_codon	15967..15969(-)		WP_003271441.1	phage tail tape measure protein	77.6	44.6	29.9
MGA_945	LOCUS_08820	sequence089:22758..23357(-)	partial			WP_137615044.1	phage major capsid protein	75.9	29.5	45.7
MGA_955	LOCUS_08920	sequence089:29028..29186(-)	partial			WP_000195784.1	DUF1381 domain-containing protein	86.5	66.2	57.8
MGA_993	LOCUS_09280	sequence091:19441..19782(+)	internal_stop_codon	19438..19440(+)		WP_000358995.1	thioredoxin-dependent arsenate reductase	91.2	78.6	82.5
MGA_1058	LOCUS_09930	sequence091:89959..90150(+)	frameshift,internal_stop_codon	90377..90379(+)	90138,90316	WP_141741171.1	IS3 family transposase	88.9	12.1	49.1
MGA_1060	LOCUS_09950	sequence091:90497..90625(-)	frameshift		90511	WP_000267236.1	nitronate monooxygenase family protein	97.6	11.5	63.4
MGA_1062	LOCUS_09970	sequence091:92099..92455(-)	partial			WP_000426696.1	CPBP family intramembrane metalloprotease SdpB	83.1	40.0	45.9
MGA_1089	LOCUS_10240	sequence091:116121..116333(-)	frameshift		115970,116135	WP_011254348.1	MFS transporter	85.7	14.8	40.0
MGA_1091	LOCUS_10260	sequence091:118271..118561(+)	frameshift		118489	WP_002041469.1	SAR2788 family putative toxin	87.5	35.2	35.7
MGA_1206	LOCUS_11400	sequence093:6977..7153(-)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1218	LOCUS_11520	sequence093:20310..22067(-)	partial			WP_011082702.1	DNA internalization-related competence protein ComEC/Rec2	94.9	74.9	36.9
MGA_1250	LOCUS_11840	sequence094:272..613(+)	frameshift		571	WP_000468966.1	methyltransferase domain-containing protein	88.5	42.1	39.2
MGA_1378	LOCUS_13120	sequence096:48369..49019(+)	partial			WP_011251246.1	radical SAM protein	65.7	50.8	40.1
MGA_1386	LOCUS_13200	sequence096:57059..58567(-)	partial			WP_000120296.1	SdrH family protein	54.0	59.5	36.9
MGA_1389	LOCUS_13230	sequence097:1192..1404(-)	internal_stop_codon	1459..1461(-)		WP_001042137.1	neuraminidase NanB	88.6	8.9	48.4
MGA_1390	LOCUS_13240	sequence097:1459..2700(-)	internal_stop_codon	1459..1461(-)		WP_001042137.1	neuraminidase NanB	90.8	54.2	60.1
MGA_1392	LOCUS_13260	sequence097:4185..4577(-)	internal_stop_codon	4605..4607(-)		WP_011476671.1	Gfo/Idh/MocA family oxidoreductase	96.2	33.7	75.2
MGA_1393	LOCUS_13270	sequence097:4605..5309(-)	internal_stop_codon	4605..4607(-)		WP_011476671.1	Gfo/Idh/MocA family oxidoreductase	100.0	63.1	74.4
MGA_1397	LOCUS_13310	sequence099:923..2116(+)	partial			WP_012582958.1	glycosyltransferase family 4 protein	63.7	63.9	23.3
MGA_1399	LOCUS_13330	sequence099:2686..5268(+)	partial			WP_012027231.1	glycosyltransferase family 2 protein	31.3	79.8	27.9
MGA_1404	LOCUS_13380	sequence099:9488..10399(+)	partial			WP_003227930.1	teichoic acids export ABC transporter ATP-binding subunit TagH	89.4	50.5	47.6
MGA_1405	LOCUS_13390	sequence099:10449..11786(+)	partial			WP_003115615.1	glycosyltransferase family 4 protein	65.2	77.5	22.4
MGA_1406	LOCUS_13400	sequence099:11914..12510(+)	partial			WP_000769722.1	PepSY domain-containing protein	42.9	53.7	35.9
MGA_1449	LOCUS_13820	sequence100:28723..29082(-)	partial			WP_001831131.1	competence type IV pilus assembly protein ComGB	99.2	33.2	41.5
MGA_1463	LOCUS_13960	sequence100:40413..41411(-)	frameshift		41481	WP_000919769.1	penicillin-binding protein 2	100.0	48.0	76.5
MGA_1464	LOCUS_13970	sequence100:41416..42399(-)	frameshift		41418	WP_002456490.1	penicillin-binding protein 2	94.2	44.3	68.8
MGA_1486	LOCUS_14190	sequence101:3671..3874(+)	frameshift		3871	WP_001829423.1	YceI family protein	100.0	39.2	61.2
MGA_1487	LOCUS_14200	sequence101:4030..4185(+)	frameshift		3871	WP_001829423.1	YceI family protein	98.0	29.2	70.0
MGA_1492	LOCUS_14250	sequence101:7572..7721(-)	internal_stop_codon	7572..7574(-)		WP_001106006.1	IS6-like element IS257 family transposase	100.0	21.9	91.8
MGA_1493	LOCUS_14260	sequence101:8374..9066(-)	partial			WP_001106654.1	hypothetical protein	65.2	79.9	42.4
MGA_1503	LOCUS_14360	sequence101:18427..18564(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_1506	LOCUS_14390	sequence101:21947..22648(+)	partial			WP_011082784.1	DsbA family protein	73.8	84.3	35.5
MGA_1563	LOCUS_14960	sequence105:99..1985(-)	partial			WP_012775697.1	DUF6359 domain-containing protein	94.4	55.8	40.1
MGA_1585	LOCUS_15170	sequence106:16375..17322(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	79.4	53.6	44.0
MGA_1605	LOCUS_15360	sequence107:3258..4145(+)	partial			WP_013533429.1	succinylglutamate desuccinylase/aspartoacylase family protein	34.9	31.3	47.1
MGA_1622	LOCUS_15530	sequence107:28977..29804(+)	partial			WP_010990014.1	autolysin Ami	68.7	20.6	45.0
MGA_1636	LOCUS_15670	sequence107:42822..43202(-)	partial			WP_000728765.1	staphylococcal protein A	77.8	20.4	53.1
MGA_1697	LOCUS_16270	sequence110:2702..2962(+)	partial			WP_001793998.1	tRNA epoxyqueuosine(34) reductase QueG	100.0	22.6	81.4
MGA_1698	LOCUS_16280	sequence110:2962..3705(+)	partial			WP_001829814.1	tRNA epoxyqueuosine(34) reductase QueG	99.2	65.2	83.3
MGA_1720	LOCUS_16480	sequence111:13187..13627(+)	partial			WP_002356543.1	(4Fe-4S)-binding protein	47.3	74.5	47.1
MGA_1731	LOCUS_16590	sequence111:27147..31550(-)	partial			WP_001032521.1	SpGH101 family endo-alpha-N-acetylgalactosaminidase	73.8	47.2	51.5
MGA_1747	LOCUS_16750	sequence112:6458..9682(-)	partial			WP_000610237.1	MSCRAMM family adhesin SdrE	77.3	70.5	33.7
MGA_1753	LOCUS_16810	sequence113:186..953(+)	partial			WP_062821545.1	serine protease	89.4	70.9	28.7
MGA_1754	LOCUS_16820	sequence113:1213..1980(+)	partial			WP_010970462.1	trypsin-like serine protease	88.6	35.8	29.0
MGA_1756	LOCUS_16840	sequence113:3373..3906(-)	partial			WP_011391188.1	PadR family transcriptional regulator	45.2	39.7	50.6
MGA_1757	LOCUS_16850	sequence113:4176..4358(+)	partial			WP_011101223.1	helix-turn-helix domain-containing protein	91.7	30.1	43.6
MGA_1759	LOCUS_16870	sequence113:4998..5270(+)	frameshift,internal_stop_codon	4718..4720(+)	4936	WP_011948612.1	type II CAAX endopeptidase family protein	91.1	30.0	40.5
MGA_1782	LOCUS_17090	sequence115:6892..7326(+)	partial			WP_003244748.1	heme-degrading oxygenase HmoB	77.8	66.9	35.7
MGA_1801	LOCUS_17280	sequence117:11343..11762(+)	frameshift,internal_stop_codon	11328..11330(+)	11726	WP_001039427.1	serine protease SplA	100.0	58.7	45.3
MGA_1802	LOCUS_17290	sequence117:11725..12000(+)	frameshift		11726	WP_001039454.1	serine protease SplB	97.8	37.1	50.6
MGA_1809	LOCUS_17360	sequence117:17095..17835(+)	internal_stop_codon	17833..17835(+),17887..17889(+)		WP_002368573.1	adenosine deaminase	98.0	72.7	42.5
MGA_1845	LOCUS_17690	sequence120:8242..10335(-)	partial			WP_011074572.1	AraC family transcriptional regulator	19.1	43.5	25.6
MGA_1904	LOCUS_18270	sequence125:174..701(-)	partial			WP_000475325.1	staphylococcal enterotoxin-like toxin X	77.7	67.0	60.3
MGA_1914	LOCUS_18370	sequence125:11215..11772(+)	frameshift		11213	WP_002437234.1	DUF3169 family protein	99.5	75.4	44.6
MGA_1964	LOCUS_18870	sequence127:3059..3631(+)	partial			WP_000402394.1	helix-turn-helix transcriptional regulator	74.7	73.1	49.0
MGA_1965	LOCUS_18880	sequence127:4093..4335(-)	frameshift		4357	WP_000544219.1	AraC family transcriptional regulator	85.0	22.7	45.6
MGA_1966	LOCUS_18890	sequence127:4352..4594(-)	frameshift		4354	WP_003246240.1	AraC family transcriptional regulator	87.5	23.7	51.4
MGA_1975	LOCUS_18980	sequence127:12727..14154(+)	partial			WP_000157953.1	sucrose-specific PTS transporter subunit IIBC	99.2	73.6	55.9
MGA_1987	LOCUS_19090	sequence128:5031..5255(+)	partial			WP_000687954.1	DsbA family oxidoreductase	83.8	25.9	52.4
MGA_2000	LOCUS_19220	sequence130:413..772(+)	partial			WP_011031828.1	non-ribosomal peptide synthetase	76.5	4.9	29.7
MGA_2008	LOCUS_19300	sequence130:8454..8816(-)	partial			WP_011023062.1	IS21-like element ISMac9 family transposase	91.7	25.6	36.9
MGA_2019	LOCUS_19390	sequence131:7943..8125(+)	internal_stop_codon	8123..8125(+)		WP_001829756.1	NADP-dependent oxidoreductase	100.0	18.0	61.7
MGA_2020	LOCUS_19400	sequence131:8162..8947(+)	internal_stop_codon	8123..8125(+)		WP_001180222.1	NADP-dependent oxidoreductase	99.6	78.1	65.4
MGA_2055	LOCUS_19740	sequence132:1356..3167(-)	internal_stop_codon	3228..3230(-),1356..1358(-)		WP_002485492.1	hypothetical protein	54.6	58.6	30.3
MGA_2061	LOCUS_19800	sequence132:5584..6606(+)	frameshift		5551	WP_000916127.1	accessory Sec system protein translocase subunit SecY2	100.0	84.6	51.6
MGA_2064	LOCUS_19830	sequence132:9688..10599(+)	partial			WP_002437878.1	accessory Sec system protein Asp3	46.9	74.7	40.1
MGA_2065	LOCUS_19840	sequence132:10599..12446(+)	frameshift		12344	WP_000680945.1	accessory Sec system translocase SecA2	98.9	76.5	68.5
MGA_2066	LOCUS_19850	sequence132:12350..12982(+)	frameshift		12344	WP_000680945.1	accessory Sec system translocase SecA2	98.6	26.3	49.3
MGA_2110	LOCUS_20280	sequence133:26633..27001(+)	partial			WP_001059647.1	ISL3 family transposase	91.8	25.3	49.1
MGA_2117	LOCUS_20350	sequence133:32991..33152(+)	frameshift		33137	WP_002485388.1	zinc-binding alcohol dehydrogenase family protein	90.6	14.3	50.0
MGA_2118	LOCUS_20360	sequence133:33149..34000(+)	frameshift		33137	WP_002485388.1	zinc-binding alcohol dehydrogenase family protein	97.5	82.4	61.7
MGA_2134	LOCUS_20520	sequence133:50713..50937(+)	partial			WP_002485391.1	UDPGP type 1 family protein	75.7	14.2	64.3
MGA_2144	LOCUS_20620	sequence134:3132..3725(+)	partial			WP_010966703.1	TetR/AcrR family transcriptional regulator	64.5	70.8	31.1
MGA_2209	LOCUS_21250	sequence137:6658..9069(-)	partial			WP_012775196.1	pneumococcal-type histidine triad protein	47.3	45.1	30.1
MGA_2254	LOCUS_21670	sequence144:197..346(+)	partial			WP_011987066.1	LD-carboxypeptidase	100.0	14.2	59.2
MGA_2261	LOCUS_21740	sequence144:7838..8437(+)	partial			WP_001829387.1	hypothetical protein	98.5	62.7	61.2
MGA_2326	LOCUS_22370	sequence148:3535..4035(+)	partial			WP_011082672.1	tyrosine-type recombinase/integrase	41.0	84.0	80.9
MGA_2399	LOCUS_23100	sequence148:87213..88388(+)	partial			WP_002468914.1	YfhO family protein	95.9	43.3	49.6
MGA_2402	LOCUS_23120	sequence150:1..529(+)	partial			WP_000072149.1	iron export ABC transporter permease subunit FetB	100.0	67.8	70.3
MGA_2413	LOCUS_23210	sequence154:118..624(+)	partial			WP_002681291.1	type II CRISPR-associated endonuclease Cas1	94.6	51.7	42.5