{ "type": "genome", "identifier": "GCF_003985145.1", "organism": "Rhizobium anhuiense", "title": "Rhizobium anhuiense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "North West Agriculture and Forestry University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003985145.1", "bioproject": "PRJNA224116", "biosample": "SAMN10370526", "wgs_master": "RIBW00000000.1", "refseq_category": "na", "taxid": "1184720", "species_taxid": "1184720", "organism_name": "Rhizobium anhuiense", "infraspecific_name": "strain=CCBAU 23252", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/12/28", "asm_name": "ASM398514v1", "asm_submitter": "North West Agriculture and Forestry University", "gbrs_paired_asm": "GCA_003985145.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/985/145/GCF_003985145.1_ASM398514v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7122203", "genome_size_ungapped": "7122173", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "44", "contig_count": "47", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003985145.1-RS_2024_04_25", "annotation_date": "2024-04-25", "total_gene_count": "6839", "protein_coding_gene_count": "6640", "non_coding_gene_count": "54", "pubmed_id": "26025940" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-12-28", "dateModified": "2018-12-28", "datePublished": "2018-12-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhizobium anhuiense" ], "sample_taxid": [ "1184720" ], "sample_host_organism": [ "Vicia faba" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"GCA_014196235.1", "taxid": 573179, "species_taxid": 573179, "relation_to_type": "type", "validated": true, "ani": 89.0532, "matched_fragments": 1761, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium hidalgonense", "strain": "strain=FH14", "accession": "GCA_002914525.1", "taxid": 1538159, "species_taxid": 1538159, "relation_to_type": "type", "validated": true, "ani": 88.9609, "matched_fragments": 1720, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium hidalgonense", "strain": "strain=FH14", "accession": "GCA_002531855.1", "taxid": 1538159, "species_taxid": 1538159, "relation_to_type": "type", "validated": true, "ani": 88.9558, "matched_fragments": 1721, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium fabae", "strain": "strain=CCBAU 33202", "accession": "GCA_003985135.1", "taxid": 573179, "species_taxid": 573179, 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87.9413, "matched_fragments": 1630, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium aethiopicum", "strain": "strain=HBR26", "accession": "GCA_900094625.1", "taxid": 1138170, "species_taxid": 1138170, "relation_to_type": "type", "validated": true, "ani": 87.4232, "matched_fragments": 1623, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium mongolense subsp. loessense", "strain": "strain=CGMCC 1.3401", "accession": "GCA_900099775.1", "taxid": 158890, "species_taxid": 57676, "relation_to_type": "type", "validated": true, "ani": 81.8084, "matched_fragments": 1221, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium dioscoreae", "strain": "strain=S-93", "accession": "GCA_009176305.1", "taxid": 2653122, "species_taxid": 2653122, "relation_to_type": "type", "validated": true, "ani": 80.566, "matched_fragments": 1015, 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