{ "type": "genome", "identifier": "GCF_003986935.1", "organism": "Paraburkholderia kururiensis JCM 10599 = LMG 19447", "title": "Paraburkholderia kururiensis JCM 10599 = LMG 19447", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Univerisdade Fereral do Rio de Janeiro", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003986935.1", "bioproject": "PRJNA224116", "biosample": "SAMN10134463", "wgs_master": "RJZE00000000.1", "refseq_category": "na", "taxid": "1236956", "species_taxid": "984307", "organism_name": "Paraburkholderia kururiensis JCM 10599 = LMG 19447", "infraspecific_name": "strain=KP23", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/12/31", "asm_name": "ASM398693v1", "asm_submitter": "Univerisdade Fereral do Rio de Janeiro", "gbrs_paired_asm": "GCA_003986935.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/986/935/GCF_003986935.1_ASM398693v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7529251", "genome_size_ungapped": "7529251", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "151", "contig_count": "151", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003986935.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "6755", "protein_coding_gene_count": "6512", "non_coding_gene_count": "58", "pubmed_id": "30811107" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-12-31", "dateModified": "2018-12-31", "datePublished": "2018-12-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Paraburkholderia kururiensis JCM 10599 = LMG 19447" ], "sample_taxid": [ "1236956" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan" ], "sample_host_location_id": [], "data_size": "2.081 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7529251", "Number of Sequences": "151", "Longest Sequences (bp)": "486214", "N50 (bp)": "221499", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.8", "Number of CDSs": "6609", "Average Protein Length": "324.4", "Coding Ratio (%)": "85.4", "Number of rRNAs": "2", "Number of tRNAs": "58", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Paraburkholderia kururiensis", "strain": "strain=KP23", "accession": "GCA_003986935.1", "taxid": 984307, 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2447, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia dinghuensis", "strain": "strain=DHOA04", "accession": "GCA_003837865.1", "taxid": 2305225, "species_taxid": 2305225, "relation_to_type": "type", "validated": true, "ani": 81.5585, "matched_fragments": 942, "total_fragments": 2447, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia saeva", "strain": "strain=LMG 31841", "accession": "GCA_907164555.1", "taxid": 2777537, "species_taxid": 2777537, "relation_to_type": "type", "validated": true, "ani": 81.2721, "matched_fragments": 1014, "total_fragments": 2447, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia fynbosensis", "strain": "strain=LMG 27177", "accession": "GCA_902859935.1", "taxid": 1200993, "species_taxid": 1200993, "relation_to_type": "type", "validated": true, "ani": 81.1264, "matched_fragments": 1106, "total_fragments": 2447, "ani_threshold": 95, "status": 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