# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_61	LOCUS_00610	sequence01:62306..63433(-)	partial			WP_014206373.1	ankyrin repeat domain-containing protein	45.3	83.3	38.5
MGA_79	LOCUS_00790	sequence01:78347..78856(-)	frameshift		78897	WP_002387003.1	KUP/HAK/KT family potassium transporter	93.5	23.7	63.9
MGA_80	LOCUS_00800	sequence01:78895..80376(-)	frameshift		78900	WP_002387003.1	KUP/HAK/KT family potassium transporter	100.0	73.7	63.5
MGA_100	LOCUS_01000	sequence01:108140..108427(-)	partial			WP_005464588.1	HTH-type transcriptional regulator PuuR	57.9	29.7	47.3
MGA_108	LOCUS_01080	sequence01:114480..115442(-)	partial			WP_071854804.1	DUF4767 domain-containing protein	64.1	61.1	34.6
MGA_137	LOCUS_01360	sequence01:151503..152045(-)	partial			WP_002296311.1	RDD family protein	90.6	74.4	58.9
MGA_159	LOCUS_01580	sequence01:171592..172080(+)	partial			WP_002395673.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	71.6	73.0	66.4
MGA_193	LOCUS_01920	sequence02:20409..21116(+)	partial			WP_011836711.1	type II CAAX endopeptidase family protein	67.2	68.2	41.9
MGA_204	LOCUS_02030	sequence02:32637..33152(+)	partial			WP_011393584.1	Rrf2 family transcriptional regulator	50.9	64.0	33.3
MGA_216	LOCUS_02150	sequence02:45350..45841(-)	partial			WP_002294107.1	hypothetical protein	36.8	36.5	46.7
MGA_225	LOCUS_02240	sequence02:55598..57346(+)	internal_stop_codon	57344..57346(+)		WP_010706747.1	DUF1116 domain-containing protein	99.3	57.9	50.4
MGA_226	LOCUS_02250	sequence02:57362..58624(+)	internal_stop_codon	57344..57346(+)		WP_010706747.1	DUF1116 domain-containing protein	98.3	41.5	65.6
MGA_238	LOCUS_02370	sequence02:71468..72565(+)	partial			WP_002387170.1	competence protein CoiA family protein	77.0	71.2	33.3
MGA_278	LOCUS_02770	sequence03:27090..28823(-)	partial			WP_002287350.1	patatin-like phospholipase family protein	61.7	62.4	35.2
MGA_285	LOCUS_02840	sequence03:35365..35859(+)	partial			WP_002354994.1	class A sortase	95.7	64.8	53.2
MGA_309	LOCUS_03080	sequence03:62230..63090(-)	partial			WP_011102034.1	hypothetical protein	60.5	76.4	32.8
MGA_332	LOCUS_03310	sequence04:2334..2507(-)	partial			WP_011675062.1	ClbS/DfsB family four-helix bundle protein	80.7	27.2	69.6
MGA_333	LOCUS_03320	sequence04:2521..2751(-)	partial			WP_002356044.1	ClbS/DfsB family four-helix bundle protein	100.0	45.0	55.3
MGA_360	LOCUS_03590	sequence04:31999..32763(-)	partial			WP_002360064.1	hypothetical protein	79.1	58.4	26.5
MGA_365	LOCUS_03640	sequence04:35035..35199(-)	partial			WP_002288574.1	glucose-6-phosphate isomerase	46.3	5.6	96.0
MGA_372	LOCUS_03710	sequence04:37709..39793(-)	partial			WP_213089166.1	right-handed parallel beta-helix repeat-containing protein	58.2	71.2	27.2
MGA_384	LOCUS_03830	sequence04:48654..49577(-)	partial			WP_003229922.1	phage major capsid protein	58.0	56.9	27.4
MGA_387	LOCUS_03860	sequence04:50818..51651(-)	partial			WP_004398748.1	phage head morphogenesis protein	67.9	62.6	37.7
MGA_399	LOCUS_03980	sequence04:59901..60305(-)	internal_stop_codon	59901..59903(-)		WP_002288368.1	single-stranded DNA-binding protein	76.1	60.6	43.7
MGA_410	LOCUS_04090	sequence04:65403..66644(+)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	47.2	59.7	57.9
MGA_453	LOCUS_04520	sequence05:28684..29463(+)	partial			WP_014206340.1	ABC transporter ATP-binding protein	82.2	72.7	48.4
MGA_478	LOCUS_04770	sequence05:58603..59571(+)	partial			WP_002379467.1	DUF1803 domain-containing protein	71.4	72.4	21.9
MGA_509	LOCUS_05080	sequence06:7831..9207(-)	frameshift		9226	WP_001983425.1	ABC transporter permease	95.4	56.1	33.6
MGA_510	LOCUS_05090	sequence06:9218..10063(-)	frameshift		10065	WP_011836618.1	ABC transporter permease	97.5	35.7	42.1
MGA_527	LOCUS_05260	sequence06:25811..26020(-)	partial			WP_011475814.1	YqgQ family protein	85.5	74.7	72.9
MGA_549	LOCUS_05480	sequence06:50681..50989(-)	partial			WP_003131392.1	metal-sulfur cluster assembly factor	78.4	72.7	67.5
MGA_552	LOCUS_05510	sequence06:56412..56723(-)	frameshift,internal_stop_codon	56410..56412(-)	56946,56733	WP_137613987.1	IS3 family transposase	98.1	26.1	61.4
MGA_553	LOCUS_05520	sequence06:57048..57263(-)	frameshift,internal_stop_codon	57048..57050(-)	56946	WP_095443744.1	IS3 family transposase	95.8	17.6	58.8
MGA_583	LOCUS_05820	sequence07:14758..15327(-)	partial			WP_002389357.1	DUF916 and DUF3324 domain-containing protein	69.3	36.6	32.6
MGA_607	LOCUS_06060	sequence07:39093..40511(-)	partial			WP_011860826.1	PTS transporter subunit IIBCA	98.5	74.5	58.5
MGA_621	LOCUS_06200	sequence07:56120..56476(-)	frameshift		56709	WP_000373527.1	NAD(P)H-dependent flavin oxidoreductase FrxA	99.2	53.9	47.0
MGA_625	LOCUS_06240	sequence07:58558..59886(-)	partial			WP_002382901.1	polysaccharide deacetylase family protein	92.5	67.2	35.5
MGA_628	LOCUS_06270	sequence08:172..774(+)	partial			WP_012775361.1	membrane protein	75.5	28.0	34.6
MGA_662	LOCUS_06610	sequence08:29618..30157(+)	partial			WP_011462299.1	hypothetical protein	33.5	24.7	50.0
MGA_672	LOCUS_06710	sequence08:36876..37037(+)	frameshift		36873	WP_002676360.1	FAD-dependent oxidoreductase	100.0	11.9	75.5
MGA_678	LOCUS_06770	sequence08:42037..45150(+)	partial			WP_002286055.1	SpaA isopeptide-forming pilin-related protein	67.4	63.3	22.0
MGA_679	LOCUS_06780	sequence08:45152..46354(+)	partial			WP_002286776.1	pilin N-terminal domain-containing protein	66.5	54.5	31.2
MGA_686	LOCUS_06850	sequence08:55351..56562(+)	frameshift		55336	WP_002286053.1	SpaH/EbpB family LPXTG-anchored major pilin	73.4	47.7	31.9
MGA_710	LOCUS_07080	sequence09:20804..21151(+)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	93.0	24.3	30.8
MGA_711	LOCUS_07090	sequence09:21227..21490(+)	frameshift,internal_stop_codon	21152..21154(+),21149..21151(+),21191..21193(+)	21445	WP_016252543.1	ISL3-like element IS1476 family transposase	86.2	17.7	44.0
MGA_712	LOCUS_07100	sequence09:21435..21590(+)	frameshift,internal_stop_codon	21152..21154(+),21149..21151(+),21191..21193(+)	21445	WP_014748796.1	ISL3 family transposase	84.3	10.1	60.5
MGA_746	LOCUS_07440	sequence09:59075..60118(+)	partial			WP_002289221.1	PTS transporter subunit EIIC	99.1	70.6	62.4
MGA_747	LOCUS_07450	sequence09:60148..60741(+)	partial			WP_000049739.1	beta-fructofuranosidase	99.5	42.0	30.8
MGA_772	LOCUS_07700	sequence10:25525..29616(-)	partial			WP_010714156.1	5'-nucleotidase C-terminal domain-containing protein	40.5	43.8	51.4
MGA_787	LOCUS_07850	sequence11:172..2064(-)	partial			WP_010869434.1	hypothetical protein	44.6	34.1	23.6
MGA_851	LOCUS_08490	sequence12:32141..32953(-)	partial			WP_014748663.1	C39 family peptidase	74.1	79.8	40.3
MGA_855	LOCUS_08530	sequence12:35145..35555(-)	partial			WP_011987027.1	flagellar protein FlaG	57.4	66.1	26.9
MGA_879	LOCUS_08770	sequence12:57927..58991(-)	frameshift		58992,59038	WP_011860706.1	fused FliR family export protein/FlhB family type III secretion system protein	97.5	57.5	40.3
MGA_882	LOCUS_08800	sequence12:60050..60805(-)	partial			WP_081361032.1	flagellar type III secretion system pore protein FliP	81.3	64.4	61.3
MGA_887	LOCUS_08850	sequence12:62975..63415(-)	partial			WP_011392298.1	flagellar hook capping FlgD N-terminal domain-containing protein	76.0	72.9	32.4
MGA_904	LOCUS_09020	sequence12:79111..79281(+)	frameshift,internal_stop_codon	79512..79514(+)	79278	WP_153495214.1	IS3 family transposase	67.9	7.9	71.1
MGA_905	LOCUS_09030	sequence12:79350..79514(+)	frameshift,internal_stop_codon	79512..79514(+)	79278	WP_153495214.1	IS3 family transposase	94.4	11.8	48.1
MGA_907	LOCUS_09050	sequence12:80964..81377(-)	partial			WP_002289576.1	YtxH domain-containing protein	78.1	62.0	32.0
MGA_930	LOCUS_09280	sequence12:101967..102971(+)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	62.0	65.2	54.9
MGA_931	LOCUS_09290	sequence12:103147..103821(+)	partial			WP_000070642.1	DUF4352 domain-containing protein	52.2	36.6	33.6
MGA_947	LOCUS_09450	sequence12:118465..120267(+)	partial			WP_010940281.1	ABC transporter substrate binding protein	42.7	22.4	31.0
MGA_951	LOCUS_09490	sequence12:125096..126607(+)	partial			WP_002361277.1	amino acid ABC transporter substrate-binding protein/permease	95.2	65.9	71.8
MGA_953	LOCUS_09510	sequence12:127496..127939(+)	partial			WP_011922709.1	DUF4430 domain-containing protein	63.9	78.5	46.3
MGA_954	LOCUS_09520	sequence12:128049..128459(+)	partial			WP_003567165.1	ECF transporter S component	93.4	66.8	35.9
MGA_1003	LOCUS_10010	sequence13:10197..11024(+)	partial			WP_002901419.1	AraC family transcriptional regulator	80.4	71.3	25.7
MGA_1115	LOCUS_11130	sequence16:20316..21050(+)	partial			WP_010868207.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	98.4	53.1	25.8
MGA_1137	LOCUS_11350	sequence17:12464..12586(-)	frameshift		12490	WP_003547389.1	NAD-dependent malic enzyme	82.5	6.1	72.7
MGA_1141	LOCUS_11390	sequence17:17610..19349(-)	partial			WP_002264627.1	serine hydrolase	59.2	83.7	31.8
MGA_1142	LOCUS_11400	sequence17:19315..20235(-)	partial			WP_011102031.1	BspA family leucine-rich repeat surface protein	46.7	17.9	28.4
MGA_1144	LOCUS_11420	sequence17:21701..22654(+)	partial			WP_011262260.1	alpha/beta hydrolase	32.8	36.0	35.8
MGA_1186	LOCUS_11840	sequence20:3841..4017(+)	partial			WP_002369771.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	84.5	55.7	53.1
MGA_1191	LOCUS_11890	sequence20:11488..12333(-)	partial			WP_002296570.1	hypothetical protein	51.6	66.7	45.4
MGA_1207	LOCUS_12040	sequence21:8086..8367(+)	partial			WP_002287697.1	hypothetical protein	100.0	35.8	51.6
MGA_1209	LOCUS_12060	sequence21:9091..10446(-)	partial			WP_102364993.1	relaxase/mobilization nuclease domain-containing protein	41.0	39.5	29.6
MGA_1217	LOCUS_12140	sequence22:1178..1855(-)	frameshift		1195	WP_004270929.1	IS30 family transposase	97.3	65.0	40.8
MGA_1261	LOCUS_12570	sequence23:31106..31612(+)	internal_stop_codon	31091..31093(+)		WP_000974899.1	HAD-IIB family hydrolase	97.0	35.2	52.1
MGA_1267	LOCUS_12630	sequence23:38188..41100(+)	partial			WP_010990018.1	SpaA isopeptide-forming pilin-related protein	28.1	16.3	30.7
MGA_1311	LOCUS_13070	sequence23:86844..87737(+)	partial			WP_002368241.1	FtsQ-type POTRA domain-containing protein	92.6	71.7	32.7
MGA_1353	LOCUS_13490	sequence23:133423..133686(-)	frameshift,internal_stop_codon	133392..133394(-),133698..133700(-),133491..133493(-),133449..133451(-),133938..133940(-)	133520,133931,133301	WP_153495214.1	IS3 family transposase	62.1	11.8	57.4
MGA_1354	LOCUS_13500	sequence23:133699..133929(-)	frameshift,internal_stop_codon	133698..133700(-),133491..133493(-),133995..133997(-),133449..133451(-),134037..134039(-),133938..133940(-)	133520,133931	WP_153495214.1	IS3 family transposase	94.7	15.8	58.3
MGA_1355	LOCUS_13510	sequence23:134243..134464(-)	frameshift,internal_stop_codon	134036..134038(-)	134248,134101	WP_141741171.1	IS3 family transposase	91.8	14.2	52.2
MGA_1374	LOCUS_13700	sequence24:327..818(+)	partial			WP_014748778.1	ISL3-like element ISEfa5 family transposase	96.9	36.7	62.7
MGA_1375	LOCUS_13710	sequence24:1020..1646(+)	frameshift		1610	WP_002387639.1	Y-family DNA polymerase	96.2	45.7	56.4
MGA_1376	LOCUS_13720	sequence24:1613..2173(+)	frameshift		2129,1610	WP_002406534.1	Y-family DNA polymerase	91.9	40.0	42.0
MGA_1377	LOCUS_13730	sequence24:2131..2298(+)	frameshift		2128	WP_002406534.1	Y-family DNA polymerase	94.5	11.9	51.9
MGA_1386	LOCUS_13820	sequence24:8109..9782(+)	partial			WP_002382310.1	cell division site-positioning protein MapZ family protein	94.1	74.8	28.2
MGA_1391	LOCUS_13870	sequence25:2133..6089(+)	partial			WP_010989917.1	MucBP domain-containing protein	70.4	78.3	30.7
MGA_1398	LOCUS_13940	sequence25:14166..14309(+)	internal_stop_codon	14373..14375(+),14307..14309(+)		WP_010716061.1	IS6 family transposase	100.0	57.3	66.7
MGA_1401	LOCUS_13970	sequence26:1854..2459(-)	internal_stop_codon	2550..2552(-)		WP_011861369.1	AAA family ATPase	96.5	35.7	29.4
MGA_1402	LOCUS_13980	sequence26:2550..3467(-)	internal_stop_codon	2550..2552(-)		WP_011861369.1	AAA family ATPase	96.7	56.7	30.7
MGA_1404	LOCUS_14000	sequence26:4904..6094(-)	partial			WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	90.2	73.0	48.8
MGA_1414	LOCUS_14100	sequence27:3521..5041(+)	partial			WP_002289134.1	response regulator	27.7	76.6	40.8
MGA_1433	LOCUS_14290	sequence29:253..792(+)	frameshift		774	WP_002324319.1	EcsC family protein	95.0	57.4	61.8
MGA_1434	LOCUS_14300	sequence29:801..1202(+)	frameshift		774	WP_002324319.1	EcsC family protein	97.7	38.9	45.4
MGA_1465	LOCUS_14590	sequence33:2687..3109(+)	partial			WP_010965782.1	GNAT family N-acetyltransferase	75.7	62.1	37.4
MGA_1483	LOCUS_14760	sequence34:13734..14543(-)	partial			WP_011021658.1	TIGR00297 family protein	77.7	45.5	27.7
MGA_1496	LOCUS_14890	sequence34:29384..29806(+)	partial			WP_002357403.1	EbsA family protein	70.7	64.1	35.4
MGA_1519	LOCUS_15120	sequence34:52993..56571(+)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	57.9	84.0	37.5
MGA_1533	LOCUS_15260	sequence34:70156..71148(+)	partial			WP_002936347.1	glycosyltransferase family 2 protein	58.5	59.3	39.6
MGA_1546	LOCUS_15390	sequence34:81170..81325(+)	partial			WP_002356384.1	teichoic acid D-Ala incorporation-associated protein DltX	70.6	73.5	58.3
MGA_1619	LOCUS_16080	sequence36:409..1638(-)	partial			WP_002288451.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	78.5	67.0	35.1
MGA_1621	LOCUS_16100	sequence37:147..>2680(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	55.5	29.0	37.1
MGA_1628	LOCUS_16140	sequence43:126..962(-)	frameshift		1006	WP_099434174.1	IS3-like element ISEfa8 family transposase	98.2	70.5	61.2
MGA_1629	LOCUS_16150	sequence43:998..1291(-)	frameshift		1012	WP_095007062.1	IS3-like element ISEfa8 family transposase	96.9	24.3	73.4
MGA_1630	LOCUS_16160	sequence44:77..367(+)	frameshift		358	WP_095007062.1	IS3-like element ISEfa8 family transposase	96.9	24.0	63.4
MGA_1631	LOCUS_16170	sequence44:409..1206(+)	frameshift		364	WP_157061663.1	IS3 family transposase	96.6	66.1	59.0
MGA_1634	LOCUS_16200	sequence45:2072..2935(-)	partial			WP_000207717.1	ABC transporter ATP-binding protein	73.5	70.8	32.9
MGA_1640	LOCUS_16260	sequence45:8004..9488(-)	partial			WP_002379724.1	LysM peptidoglycan-binding domain-containing protein	47.4	44.9	48.7
MGA_1641	LOCUS_16270	sequence45:9507..11288(-)	partial			WP_051073386.1	hypothetical protein	80.1	63.8	20.6
MGA_1664	LOCUS_16500	sequence45:32621..33715(-)	partial			WP_011101277.1	serine hydrolase domain-containing protein	65.7	60.9	37.9
MGA_1709	LOCUS_16920	sequence45:84559..87957(-)	partial			WP_011475518.1	type II CRISPR RNA-guided endonuclease Cas9	66.7	67.1	24.1
MGA_1742	LOCUS_17250	sequence45:124638..125678(+)	partial			WP_011015907.1	CoA-disulfide reductase	97.1	43.6	41.3
MGA_1744	LOCUS_17270	sequence45:126010..126363(-)	frameshift,internal_stop_codon	125736..125738(-),126009..126011(-),126486..126488(-),126573..126575(-)	126533	WP_011102189.1	IS1182 family transposase	98.3	20.7	68.7
MGA_1750	LOCUS_17330	sequence45:132359..132760(-)	frameshift,internal_stop_codon	132838..132840(-)	132885	WP_002305939.1	IS30 family transposase	100.0	41.7	78.9
MGA_1751	LOCUS_17340	sequence45:132757..133044(-)	frameshift,internal_stop_codon	132838..132840(-)	132885,133270	WP_002311774.1	IS30 family transposase	55.8	16.6	67.9
MGA_1752	LOCUS_17350	sequence46:441..1064(+)	partial			WP_014748778.1	ISL3-like element ISEfa5 family transposase	98.6	47.1	55.9
MGA_1756	LOCUS_17370	sequence49:611..1240(+)	partial			WP_025479011.1	DUF4767 domain-containing protein	71.8	61.9	50.7
MGA_1824	LOCUS_18050	sequence49:88110..88352(+)	partial			WP_002286666.1	GlsB/YeaQ/YmgE family stress response membrane protein	63.8	63.0	70.6
MGA_1832	LOCUS_18130	sequence49:94845..95207(+)	partial			WP_011013664.1	thioesterase family protein	78.3	67.6	31.9
MGA_1868	LOCUS_18490	sequence49:126460..126873(+)	partial			WP_010905251.1	YcjF family protein	75.2	47.5	37.9
MGA_1906	LOCUS_18870	sequence50:33899..34804(-)	partial			WP_002286364.1	class C sortase	86.0	66.1	39.4
MGA_1910	LOCUS_18910	sequence50:37132..38457(-)	partial			WP_002387667.1	CAP domain-containing protein	51.2	51.9	32.6
MGA_1958	LOCUS_19390	sequence50:81096..84872(-)	partial			WP_211477941.1	SpaA isopeptide-forming pilin-related protein	54.6	49.9	31.3
MGA_1963	LOCUS_19440	sequence50:89273..90478(-)	partial			WP_011393551.1	serine hydrolase	59.6	72.1	30.5
MGA_2006	LOCUS_19870	sequence51:18449..18721(-)	partial			WP_002363448.1	chorismate mutase	92.2	29.5	37.3
MGA_2015	LOCUS_19960	sequence51:29904..32459(-)	partial			WP_010706701.1	autolysin	65.7	71.9	43.4
MGA_2030	LOCUS_20110	sequence51:48236..51997(-)	partial			WP_010819087.1	hypothetical protein	11.3	8.3	33.6
MGA_2039	LOCUS_20200	sequence51:57824..58504(+)	partial			WP_012047728.1	class D sortase	58.8	63.7	34.6
MGA_2059	LOCUS_20400	sequence51:76021..76578(-)	partial			WP_002321666.1	FMN-binding protein	97.8	56.3	49.7
MGA_2072	LOCUS_20530	sequence51:88582..89886(+)	partial			WP_010774225.1	DUF6056 family protein	94.0	68.8	25.9
MGA_2100	LOCUS_20810	sequence51:119272..120570(-)	partial			WP_002386952.1	serine hydrolase domain-containing protein	69.7	77.3	33.8
MGA_2135	LOCUS_21160	sequence52:34389..35273(-)	partial			WP_002900658.1	cation diffusion facilitator family transporter	97.6	72.1	51.9
MGA_2141	LOCUS_21220	sequence52:40049..41137(+)	partial			WP_011674815.1	hypothetical protein	78.5	72.4	39.3
MGA_2161	LOCUS_21420	sequence52:61850..62353(+)	internal_stop_codon	62351..62353(+)		WP_002358005.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	100.0	70.4	52.1
MGA_2162	LOCUS_21430	sequence52:62360..62566(+)	internal_stop_codon	62351..62353(+)		WP_002292852.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	95.6	27.2	41.5
MGA_2187	LOCUS_21680	sequence52:87907..88083(+)	partial			WP_003694124.1	30S ribosomal protein S21	74.1	70.5	100.0
MGA_2214	LOCUS_21950	sequence52:120820..122544(+)	partial			WP_002399785.1	bifunctional glutamate--cysteine ligase/glutathione synthetase	68.6	52.1	52.3
