{ "type": "genome", "identifier": "GCF_003990335.1", "organism": "Rheinheimera mangrovi", "title": "Rheinheimera mangrovi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003990335.1", "bioproject": "PRJNA224116", "biosample": "SAMN10617864", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2498451", "species_taxid": "2498451", "organism_name": "Rheinheimera mangrovi", "infraspecific_name": "strain=LHK132", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/01/02", "asm_name": "ASM399033v1", "asm_submitter": "Zhejiang University", "gbrs_paired_asm": "GCA_003990335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/990/335/GCF_003990335.1_ASM399033v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4628354", "genome_size_ungapped": "4628354", "gc_percent": "46.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003990335.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "4142", "protein_coding_gene_count": "4025", "non_coding_gene_count": "98", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-01-02", "dateModified": "2019-01-02", "datePublished": "2019-01-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Rheinheimera mangrovi" ], "sample_taxid": [ "2498451" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Haikou city" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rheinheimera tangshanensis", "strain": "strain=JA3-B52", "accession": "GCA_008017875.1", "taxid": 400153, "species_taxid": 400153, "relation_to_type": "type", "validated": true, "ani": 86.2015, "matched_fragments": 1077, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pararheinheimera mesophila", "strain": "strain=IITR-13", "accession": "GCA_000986865.1", "taxid": 1547515, "species_taxid": 1547515, "relation_to_type": "type", "validated": true, "ani": 84.9532, "matched_fragments": 975, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pararheinheimera mesophila", "strain": "strain=IITR13", "accession": "GCA_003862465.1", "taxid": 1547515, "species_taxid": 1547515, "relation_to_type": "type", "validated": true, "ani": 84.9179, "matched_fragments": 1002, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rheinheimera riviphila", "strain": "strain=KYPC3", "accession": "GCA_004005945.1", "taxid": 1834037, "species_taxid": 1834037, "relation_to_type": "type", "validated": true, "ani": 78.6917, "matched_fragments": 333, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pararheinheimera texasensis", "strain": "strain=DSM 17496", "accession": "GCA_000711985.1", "taxid": 306205, "species_taxid": 306205, "relation_to_type": "type", "validated": true, "ani": 78.4316, "matched_fragments": 278, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rheinheimera hassiensis", "strain": "strain=LMG 27268", "accession": "GCA_022436675.1", "taxid": 1193627, "species_taxid": 1193627, "relation_to_type": "type", "validated": true, "ani": 78.222, "matched_fragments": 254, "total_fragments": 1542, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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