{ "type": "genome", "identifier": "GCF_003994465.1", "organism": "Paenibacillus zeisoli", "title": "Paenibacillus zeisoli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Anhui Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003994465.1", "bioproject": "PRJNA224116", "biosample": "SAMN10579155", "wgs_master": "RZNX00000000.1", "refseq_category": "reference genome", "taxid": "2496267", "species_taxid": "2496267", "organism_name": "Paenibacillus zeisoli", "infraspecific_name": "strain=3-5-3", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/01/05", "asm_name": "ASM399446v1", "asm_submitter": "Anhui Agricultural University", "gbrs_paired_asm": "GCA_003994465.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/994/465/GCF_003994465.1_ASM399446v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4401636", "genome_size_ungapped": "4401636", "gc_percent": "48.000000", "replicon_count": "0", "scaffold_count": "26", "contig_count": "26", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003994465.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "4139", "protein_coding_gene_count": "4071", "non_coding_gene_count": "45", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-01-05", "dateModified": "2019-01-05", "datePublished": "2019-01-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus zeisoli" ], "sample_taxid": [ "2496267" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Nanyang city, Henan province" ], "sample_host_location_id": [], "data_size": "1.259 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4401636", "Number of Sequences": "26", "Longest Sequences (bp)": "1317101", "N50 (bp)": "530374", "Gap Ratio (%)": "0.000386", "GCcontent (%)": "48.1", "Number of CDSs": "4129", "Average Protein Length": "308.1", "Coding Ratio (%)": "86.7", "Number of rRNAs": "1", "Number of tRNAs": "35", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Paenibacillus zeisoli", "strain": "strain=3-5-3", "accession": "GCA_003994465.1", "taxid": 2496267, "species_taxid": 2496267, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1457, "total_fragments": 1458, 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Paenibacillus", "zeisoli" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }