{ "tc_result": [ { "organism_name": "Mycolicibacterium brumae", "strain": "strain=DSM 44177", "accession": "GCA_004014795.1", "taxid": 85968, "species_taxid": 85968, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1265, "total_fragments": 1268, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Mycolicibacterium brumae", "strain": "strain=ATCC 51384", "accession": "GCA_025215495.1", "taxid": 85968, "species_taxid": 85968, "relation_to_type": "type", "validated": true, "ani": 99.996, "matched_fragments": 1266, "total_fragments": 1268, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=DSM 44179", "accession": "GCA_002101995.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 83.9176, "matched_fragments": 842, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=JCM 6405", "accession": "GCA_010726955.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 83.8841, "matched_fragments": 861, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium insubricum", "strain": "strain=JCM 16366", "accession": "GCA_010731615.1", "taxid": 444597, "species_taxid": 444597, "relation_to_type": "type", "validated": true, "ani": 82.7534, "matched_fragments": 825, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chitae", "strain": "strain=NCTC10485", "accession": "GCA_900637205.1", "taxid": 1792, "species_taxid": 1792, "relation_to_type": "type", "validated": true, "ani": 81.0128, "matched_fragments": 732, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chitae", "strain": "strain=JCM 12403", "accession": "GCA_010727725.1", "taxid": 1792, "species_taxid": 1792, "relation_to_type": "type", "validated": true, "ani": 80.9901, "matched_fragments": 739, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium palauense", "strain": "strain=CECT 8779", "accession": "GCA_002592005.1", "taxid": 2034511, "species_taxid": 2034511, "relation_to_type": "type", "validated": true, "ani": 80.6832, "matched_fragments": 694, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium rutilum", "strain": "strain=DSM 45405", "accession": "GCA_900108565.1", "taxid": 370526, "species_taxid": 370526, "relation_to_type": "type", "validated": true, "ani": 80.1894, "matched_fragments": 653, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium confluentis", "strain": "strain=DSM 44017", "accession": "GCA_002102105.1", "taxid": 28047, "species_taxid": 28047, "relation_to_type": "type", "validated": true, "ani": 80.0422, "matched_fragments": 651, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium confluentis", "strain": "strain=JCM 13671", "accession": "GCA_010729895.1", "taxid": 28047, "species_taxid": 28047, "relation_to_type": "type", "validated": true, "ani": 80.014, "matched_fragments": 655, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium elephantis", "strain": "strain=DSM 44368", "accession": "GCA_004014805.1", "taxid": 81858, "species_taxid": 81858, "relation_to_type": "type", "validated": true, "ani": 79.8447, "matched_fragments": 579, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium aquaticum", "strain": "strain=RW6", "accession": "GCA_002086485.1", "taxid": 1927124, "species_taxid": 1927124, "relation_to_type": "type", "validated": true, "ani": 79.6678, "matched_fragments": 654, "total_fragments": 1268, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004014795.1", "gtdb_species": "s__Mycobacterium brumae", "ani": 100.0, "matched_fragments": 1265, "total_fragments": 1268, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_010726955.1", "gtdb_species": "s__Mycobacterium fallax", "ani": 83.8732, "matched_fragments": 862, "total_fragments": 1268, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_010731615.1", "gtdb_species": "s__Mycobacterium insubricum", "ani": 82.7591, "matched_fragments": 825, "total_fragments": 1268, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900637205.1", "gtdb_species": "s__Mycobacterium chitae", "ani": 81.0061, "matched_fragments": 733, "total_fragments": 1268, "gtdb_taxonomy": 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.94", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004570325.1", "gtdb_species": "s__Mycobacterium sp004570325", "ani": 80.2618, "matched_fragments": 683, "total_fragments": 1268, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900108565.1", "gtdb_species": "s__Mycobacterium rutilum", "ani": 80.1934, "matched_fragments": 653, "total_fragments": 1268, "gtdb_taxonomy": 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