{ "type": "genome", "identifier": "GCF_004014855.1", "organism": "Apibacter raozihei", "title": "Apibacter raozihei", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chinese Center for Disease Control and Prevention", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004014855.1", "bioproject": "PRJNA224116", "biosample": "SAMN10691118", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2500547", "species_taxid": "2500547", "organism_name": "Apibacter raozihei", "infraspecific_name": "strain=HY041", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/01/14", "asm_name": "ASM401485v1", "asm_submitter": "Chinese Center for Disease Control and Prevention", "gbrs_paired_asm": "GCA_004014855.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/014/855/GCF_004014855.1_ASM401485v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3293048", "genome_size_ungapped": "3293048", "gc_percent": "32.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004014855.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "2945", "protein_coding_gene_count": "2885", "non_coding_gene_count": "55", "pubmed_id": "31661042" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-01-14", "dateModified": "2019-01-14", "datePublished": "2019-01-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Apibacter raozihei" ], "sample_taxid": [ "2500547" ], "sample_host_organism": [ "Bat" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Changshou District, Chongqing City" ], "sample_host_location_id": [], "data_size": "0.911 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3293048", "Number of Sequences": "1", "Longest Sequences (bp)": "3293048", "N50 (bp)": "3293048", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "32.2", "Number of CDSs": "2889", "Average Protein Length": "334.4", "Coding Ratio (%)": "88.0", "Number of rRNAs": "9", "Number of tRNAs": "43", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Apibacter raozihei", "strain": "strain=HY041", "accession": "GCA_004014855.1", "taxid": 2500547, 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