{ "type": "genome", "identifier": "GCF_004104015.1", "organism": "Actinomyces oricola", "title": "Actinomyces oricola", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chinese Center for Disease Control and Prevention", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004104015.1", "bioproject": "PRJNA224116", "biosample": "SAMN10601821", "wgs_master": "RYFV00000000.1", "refseq_category": "reference genome", "taxid": "206043", "species_taxid": "206043", "organism_name": "Actinomyces oricola", "infraspecific_name": "strain=R5292", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/01/23", "asm_name": "ASM410401v1", "asm_submitter": "Chinese Center for Disease Control and Prevention", "gbrs_paired_asm": "GCA_004104015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/104/015/GCF_004104015.1_ASM410401v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2930686", "genome_size_ungapped": "2930686", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "78", "contig_count": "78", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004104015.1-RS_2024_04_03", "annotation_date": "2024-04-03", "total_gene_count": "2493", "protein_coding_gene_count": "2390", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-01-23", "dateModified": "2019-01-23", "datePublished": "2019-01-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomyces oricola" ], "sample_taxid": [ "206043" ], "sample_host_organism": [ "Homo sapiens" ], 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"organism_name": "Actinomyces gaoshouyii", "strain": "strain=CGMCC 4.7372", "accession": "GCA_014646495.1", "taxid": 1960083, "species_taxid": 1960083, "relation_to_type": "type", "validated": true, "ani": 80.0531, "matched_fragments": 394, "total_fragments": 941, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces ruminicola", "strain": "strain=DSM 27982", "accession": "GCA_900103885.1", "taxid": 332524, "species_taxid": 332524, "relation_to_type": "type", "validated": true, "ani": 79.9545, "matched_fragments": 458, "total_fragments": 941, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces howellii", "strain": "strain=NCTC11636", "accession": "GCA_900637165.1", "taxid": 52771, "species_taxid": 52771, "relation_to_type": "type", "validated": true, "ani": 79.8411, "matched_fragments": 453, "total_fragments": 941, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces howellii", "strain": 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