{
    "type": "genome",
    "identifier": "GCF_004116955.1",
    "organism": "Bacillus vallismortis",
    "title": "Bacillus vallismortis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Kyungpook National University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_004116955.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN08222596",
        "wgs_master": "na",
        "refseq_category": "na",
        "taxid": "72361",
        "species_taxid": "72361",
        "organism_name": "Bacillus vallismortis",
        "infraspecific_name": "strain=DSM 11031",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/01/29",
        "asm_name": "ASM411695v1",
        "asm_submitter": "Kyungpook National University",
        "gbrs_paired_asm": "GCA_004116955.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/116/955/GCF_004116955.1_ASM411695v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4286362",
        "genome_size_ungapped": "4286362",
        "gc_percent": "44.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004116955.1-RS_2024_04_22",
        "annotation_date": "2024-04-22",
        "total_gene_count": "4509",
        "protein_coding_gene_count": "4205",
        "non_coding_gene_count": "122",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-01-29",
    "dateModified": "2019-01-29",
    "datePublished": "2019-01-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillus vallismortis"
        ],
        "sample_taxid": [
            "72361"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "1.211 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4286362",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4286362",
        "N50 (bp)": "4286362",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.8",
        "Number of CDSs": "4407",
        "Average Protein Length": "282.9",
        "Coding Ratio (%)": "87.2",
        "Number of rRNAs": "30",
        "Number of tRNAs": "87",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bacillus vallismortis",
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                "accession": "GCA_004116955.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bacillus vallismortis",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1240,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bacillus spizizenii",
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                "accession": "GCA_000227465.1",
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                "species_taxid": 96241,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus spizizenii",
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                "accession": "GCA_007989785.1",
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                "species_taxid": 96241,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1171,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus inaquosorum",
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                "accession": "GCA_003148415.1",
                "taxid": 483913,
                "species_taxid": 483913,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1210,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus inaquosorum",
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                "accession": "GCA_000332645.1",
                "taxid": 483913,
                "species_taxid": 483913,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.998,
                "matched_fragments": 1201,
                "total_fragments": 1428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus subtilis subsp. subtilis",
                "strain": "strain=168",
                "accession": "GCA_024917115.1",
                "taxid": 135461,
                "species_taxid": 1423,
                "relation_to_type": "type",
                "validated": true,
                "ani": 90.6,
                "matched_fragments": 1210,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus tequilensis",
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                "accession": "GCA_900445435.1",
                "taxid": 227866,
                "species_taxid": 227866,
                "relation_to_type": "type",
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                "matched_fragments": 988,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Peribacillus kribbensis",
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                "accession": "GCA_000430765.1",
                "taxid": 356658,
                "species_taxid": 356658,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2096,
                "matched_fragments": 55,
                "total_fragments": 1428,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_004116955.1",
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                "matched_fragments": 1419,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.90",
                "min_intra_species_ani": "97.68",
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            },
            {
                "accession": "GCF_002153395.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.63",
                "min_intra_species_ani": "97.72",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000227465.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
                "ani_circumscription_radius": 95.0,
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            },
            {
                "accession": "GCA_000332645.1",
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                "accession": "GCF_004124315.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus",
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            },
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                "accession": "GCF_000009045.1",
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                "accession": "GCF_000507145.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "vallismortis"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}