{ "type": "genome", "identifier": "GCF_004139715.1", "organism": "Muriicola soli", "title": "Muriicola soli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chungnam National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004139715.1", "bioproject": "PRJNA224116", "biosample": "SAMN10754312", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2507538", "species_taxid": "2507538", "organism_name": "Muriicola soli", "infraspecific_name": "strain=MMS17-SY002", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/06", "asm_name": "ASM413971v1", "asm_submitter": "Chungnam National University", "gbrs_paired_asm": "GCA_004139715.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/139/715/GCF_004139715.1_ASM413971v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3067493", "genome_size_ungapped": "3067493", "gc_percent": "42.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004139715.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "2850", "protein_coding_gene_count": "2725", "non_coding_gene_count": "49", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-06", "dateModified": "2019-02-06", "datePublished": "2019-02-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Muriicola soli" ], "sample_taxid": [ "2507538" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Seonyu Island" ], "sample_host_location_id": [], "data_size": "0.872 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3067493", "Number of Sequences": "1", "Longest Sequences (bp)": "3067493", "N50 (bp)": "3067493", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.4", "Number of CDSs": "2827", "Average Protein Length": "329.5", "Coding Ratio (%)": "91.1", "Number of rRNAs": "6", "Number of tRNAs": "40", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Muriicola soli", "strain": "strain=MMS17-SY002", "accession": "GCA_004139715.1", "taxid": 2507538, "species_taxid": 2507538, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1021, "total_fragments": 1022, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Muriicola jejuensis", "strain": "strain=KCTC 22299", "accession": "GCA_010671595.1", "taxid": 504488, "species_taxid": 504488, "relation_to_type": "type", "validated": true, "ani": 77.7618, "matched_fragments": 306, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Muriicola marianensis", "strain": "strain=CGMCC 1.12606", "accession": "GCA_014638095.1", "taxid": 1324801, "species_taxid": 1324801, "relation_to_type": "type", "validated": true, "ani": 77.4918, "matched_fragments": 307, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter dokdonensis", "strain": "strain=DSW-8", "accession": "GCA_001447995.1", "taxid": 320912, "species_taxid": 320912, "relation_to_type": "type", "validated": true, "ani": 77.4769, "matched_fragments": 58, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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