{ "type": "genome", "identifier": "GCF_004168035.1", "organism": "Nocardioides iriomotensis", "title": "Nocardioides iriomotensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "South China University of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004168035.1", "bioproject": "PRJNA224116", "biosample": "SAMN10797871", "wgs_master": "SDPU00000000.1", "refseq_category": "reference genome", "taxid": "715784", "species_taxid": "715784", "organism_name": "Nocardioides iriomotensis", "infraspecific_name": "strain=NBRC 105384", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/11", "asm_name": "ASM416803v1", "asm_submitter": "South China University of Technology", "gbrs_paired_asm": "GCA_004168035.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/168/035/GCF_004168035.1_ASM416803v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4713567", "genome_size_ungapped": "4713567", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "47", "contig_count": "47", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004168035.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4635", "protein_coding_gene_count": "4553", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-11", "dateModified": "2019-02-11", "datePublished": "2019-02-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardioides iriomotensis" ], "sample_taxid": [ "715784" ], "sample_host_organism": [], 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"below_threshold" }, { "organism_name": "Nocardioides euryhalodurans", "strain": "strain=MMS17-SY117", "accession": "GCA_004564375.1", "taxid": 2518370, "species_taxid": 2518370, "relation_to_type": "type", "validated": true, "ani": 80.0777, "matched_fragments": 715, "total_fragments": 1551, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinisabuli", "strain": "strain=DSM 18965", "accession": "GCA_013409965.1", "taxid": 419476, "species_taxid": 419476, "relation_to_type": "type", "validated": true, "ani": 80.0334, "matched_fragments": 705, "total_fragments": 1551, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinisabuli", "strain": "strain=DSM 18965", "accession": "GCA_013466785.1", "taxid": 419476, "species_taxid": 419476, "relation_to_type": "type", "validated": true, "ani": 80.0288, "matched_fragments": 702, "total_fragments": 1551, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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