{ "type": "genome", "identifier": "GCF_004217385.1", "organism": "Phyllobacterium myrsinacearum", "title": "Phyllobacterium myrsinacearum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004217385.1", "bioproject": "PRJNA224116", "biosample": "SAMN10866329", "wgs_master": "SHLH00000000.1", "refseq_category": "reference genome", "taxid": "28101", "species_taxid": "28101", "organism_name": "Phyllobacterium myrsinacearum", "infraspecific_name": "strain=DSM 5892", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/20", "asm_name": "ASM421738v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_004217385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/217/385/GCF_004217385.1_ASM421738v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5424106", "genome_size_ungapped": "5423909", "gc_percent": "59.500000", "replicon_count": "0", "scaffold_count": "17", "contig_count": "17", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004217385.1-RS_2024_05_01", "annotation_date": "2024-05-01", "total_gene_count": "5224", "protein_coding_gene_count": "5139", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-20", "dateModified": "2019-02-20", "datePublished": "2019-02-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Phyllobacterium myrsinacearum" ], "sample_taxid": [ "28101" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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"below_threshold" }, { "organism_name": "Phyllobacterium zundukense", "strain": "strain=Tri-48; RCAM 03910", "accession": "GCA_002764115.1", "taxid": 1867719, "species_taxid": 1867719, "relation_to_type": "type", "validated": true, "ani": 80.7857, "matched_fragments": 884, "total_fragments": 1800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium sophorae", "strain": "strain=CCBAU 03422", "accession": "GCA_003010965.1", "taxid": 1520277, "species_taxid": 1520277, "relation_to_type": "type", "validated": true, "ani": 80.2411, "matched_fragments": 858, "total_fragments": 1800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium brassicacearum", "strain": "strain=STM 196", "accession": "GCA_003010955.1", "taxid": 314235, "species_taxid": 314235, "relation_to_type": "type", "validated": true, "ani": 80.0246, "matched_fragments": 808, "total_fragments": 1800, "ani_threshold": 95, "status": "below_threshold" }, { 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