{
    "type": "genome",
    "identifier": "GCF_004295585.1",
    "organism": "Cohnella abietis",
    "title": "Cohnella abietis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Korea Research Institute of Bioscience and Biotechnology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_004295585.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00159221",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2507935",
        "species_taxid": "2507935",
        "organism_name": "Cohnella abietis",
        "infraspecific_name": "strain=KCTC 43028",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/01/29",
        "asm_name": "ASM429558v1",
        "asm_submitter": "Korea Research Institute of Bioscience and Biotechnology",
        "gbrs_paired_asm": "GCA_004295585.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/295/585/GCF_004295585.1_ASM429558v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "7059027",
        "genome_size_ungapped": "7059027",
        "gc_percent": "45.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004295585.1-RS_2024_12_13",
        "annotation_date": "2024-12-13",
        "total_gene_count": "6223",
        "protein_coding_gene_count": "6066",
        "non_coding_gene_count": "111",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-01-29",
    "dateModified": "2019-01-29",
    "datePublished": "2019-01-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cohnella abietis"
        ],
        "sample_taxid": [
            "2507935"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Korea:Jeju, Halla mountain"
        ],
        "sample_host_location_id": [],
        "data_size": "2.003 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "7059027",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "7059027",
        "N50 (bp)": "7059027",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.8",
        "Number of CDSs": "6203",
        "Average Protein Length": "328.8",
        "Coding Ratio (%)": "86.7",
        "Number of rRNAs": "27",
        "Number of tRNAs": "78",
        "Number of CRISPRs": "13"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Cohnella abietis",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 2353,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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                "accession": "GCA_003945345.1",
                "taxid": 1712516,
                "species_taxid": 1712516,
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                "ani": 80.1322,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cohnella cholangitidis",
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                "species_taxid": 2598458,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cohnella herbarum",
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                "species_taxid": 2728023,
                "relation_to_type": "type",
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                "matched_fragments": 505,
                "total_fragments": 2353,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus alvei",
                "strain": "strain=DSM 29",
                "accession": "GCA_000293805.1",
                "taxid": 44250,
                "species_taxid": 44250,
                "relation_to_type": "type",
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                "ani": 79.4144,
                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cohnella endophytica",
                "strain": "strain=M2MS4P-1",
                "accession": "GCA_003628305.1",
                "taxid": 2419778,
                "species_taxid": 2419778,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2815,
                "matched_fragments": 387,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cohnella luojiensis",
                "strain": "strain=CCTCC AB 208254",
                "accession": "GCA_004564235.1",
                "taxid": 652876,
                "species_taxid": 652876,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 423,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cohnella lupini",
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                "ani": 79.1875,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus endophyticus",
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                "accession": "GCA_014192395.1",
                "taxid": 1294268,
                "species_taxid": 1294268,
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                "validated": true,
                "ani": 78.2571,
                "matched_fragments": 77,
                "total_fragments": 2353,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus prosopidis",
                "strain": "strain=CECT 7506",
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                "taxid": 630520,
                "species_taxid": 630520,
                "relation_to_type": "type",
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                "ani": 77.3733,
                "matched_fragments": 67,
                "total_fragments": 2353,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus mendelii",
                "strain": "strain=C/2",
                "accession": "GCA_024498075.1",
                "taxid": 206163,
                "species_taxid": 206163,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9946,
                "matched_fragments": 94,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus lupini",
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                "accession": "GCA_011761355.1",
                "taxid": 1450204,
                "species_taxid": 1450204,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.655,
                "matched_fragments": 83,
                "total_fragments": 2353,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_004295585.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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            },
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}