{ "type": "genome", "identifier": "GCF_004295665.1", "organism": "Litorilituus sediminis", "title": "Litorilituus sediminis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jining Medical University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004295665.1", "bioproject": "PRJNA224116", "biosample": "SAMN10662180", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "718192", "species_taxid": "718192", "organism_name": "Litorilituus sediminis", "infraspecific_name": "strain=JCM 17549", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/25", "asm_name": "ASM429566v1", "asm_submitter": "Jining Medical University", "gbrs_paired_asm": "GCA_004295665.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/295/665/GCF_004295665.1_ASM429566v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4275717", "genome_size_ungapped": "4275717", "gc_percent": "39.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004295665.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "3802", "protein_coding_gene_count": "3692", "non_coding_gene_count": "87", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-25", "dateModified": "2019-02-25", "datePublished": "2019-02-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Litorilituus sediminis" ], "sample_taxid": [ "718192" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Yellow Sea" ], 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"status": "conclusive" }, { "organism_name": "Litorilituus lipolyticus", "strain": "strain=RZ04", "accession": "GCA_006439335.1", "taxid": 2491017, "species_taxid": 2491017, "relation_to_type": "type", "validated": true, "ani": 79.6824, "matched_fragments": 506, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassotalea crassostreae", "strain": "strain=LPB0090", "accession": "GCA_001831495.1", "taxid": 1763536, "species_taxid": 1763536, "relation_to_type": "type", "validated": true, "ani": 78.9798, "matched_fragments": 150, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Colwellia ponticola", "strain": "strain=OISW-25", "accession": "GCA_005885605.1", "taxid": 2304625, "species_taxid": 2304625, "relation_to_type": "type", "validated": true, "ani": 78.7266, "matched_fragments": 315, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio 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"GCA_900111755.1", "taxid": 349064, "species_taxid": 349064, "relation_to_type": "type", "validated": true, "ani": 78.4601, "matched_fragments": 151, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Colwellia demingiae", "strain": "strain=ACAM 459", "accession": "GCA_007954275.1", "taxid": 89401, "species_taxid": 89401, "relation_to_type": "type", "validated": true, "ani": 78.4286, "matched_fragments": 360, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Colwellia piezophila", "strain": "strain=ATCC BAA-637", "accession": "GCA_000378625.1", "taxid": 211668, "species_taxid": 211668, "relation_to_type": "type", "validated": true, "ani": 78.3561, "matched_fragments": 348, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassotalea crassostreae", "strain": "strain=LPB0090", "accession": "GCA_001652445.1", "taxid": 1763536, "species_taxid": 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